Aphelocoma coerulescens (scrub jay): 138105333
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Entry
138105333 CDS
T10543
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03440
Homologous recombination
Brite
DNA repair and recombination proteins [BR:
acoe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
138105333 (RAD54B)
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GFIT
Other DBs
NCBI-GeneID:
138105333
NCBI-ProteinID:
XP_068861238
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Position
2:complement(143947196..144015691)
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AA seq
926 aa
AA seq
DB search
MRTVQLNMRRSAAPSQVVGNAGKKPRFIPPGKCIPVCLKNETKEMDQEMKLKEIEEKEGD
ASLLSKINVQNQNENFTQSLESTGKVKTKACFSVDKCSKAEMKMLNVPKADALYLPTSGT
AKEEAAQEAPDCLVKYFSVVWCKASKKKHKKWEGDAILMIKGKSVILKDMEGKDIGRGTG
YKAKELESLNEGQTLMVGGKEIEVMGVISADDFSSGRCFQAGIGTHDTVPTALSETITKP
FCKPFKNVCQPSTKENMLKDSQSCKPRHDPNAPNSLVMPRPNSSHQWMFNKAVLPVVDVV
VDPYIANNLRQHQKEGIIFLYECVMGMRVSGRFGAILADEMGLGKTLQCIALVWTLLRQG
PYGCKPVLKRALVVTPGSLVKNWKKEFQKWLGSERIKVFTVDQDHKVEEFIGSPLYSVMI
ISYEMLLRSLDQIQAVEFNLLICDEGHRLKNSTIKTTTALTSLSCERRIILTGTPIQNDL
QEFYALIEFVNPGILGSLSTYRKIYEEPIVRSREPSATEEEKELGVKRAAELTRLTRLFI
LRRTQEVINKFLPPKKESIIFCRPTALQLELYRKLLSSHVITSCLQGRLENSPHLMCIGA
LKKLCNHPCLLFKAIKEKSHDPMSEDYDESSLYEGVIDVFPQGYTLDTFSETDSGKLQVL
VKLLAAIHELNSSERVVLVSNYTQTLNVLQDVCKHYGYSYTRLDGHTPVSQRQHIVDTFN
SKFSPAFIFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKHTVHIYR
LLTTGSIEEKIYQRQISKQDLSGAVVDLSKTSEHTHFSIEELKNLFTLHEDSSCVTHDLL
ECDCMGKIDHHNTSSEKPPISRSCQLEQNHGKPNSKKPLSMSQLMQWKHFSGQHQTLADP
FLERIKENVSFIFQNVTNSTSPPNET
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgagaacagtacagttaaatatgaggcgatctgcagctccaagtcaagtcgtaggaaat
gcaggcaaaaagccaaggtttataccaccagggaagtgtattcctgtttgtctcaagaat
gaaactaaggagatggaccaagaaatgaagttaaaggagatagaagagaaagagggagat
gcttcattgctttctaaaataaatgtccagaatcaaaatgaaaattttacacagtctttg
gagtcaactggaaaagtaaagacaaaagcatgtttcagtgttgacaagtgtagcaaggca
gaaatgaaaatgctaaatgtgcccaaagctgatgcactgtatttgccaacatcagggaca
gcaaaggaagaagcagctcaggaagcacctgactgccttgtgaaatatttcagtgtcgtg
tggtgtaaggcatcaaagaaaaagcacaagaagtgggaaggcgatgctattcttatgata
aaaggaaagtcagtaatattgaaagatatggaaggcaaagacattggcagaggtactgga
tataaagctaaagagctagaaagtctcaatgaaggtcaaacactgatggttggcggaaaa
gaaattgaagtgatgggtgtaatttcagcagatgatttcagcagtggcaggtgttttcag
gctggaatagggactcatgacacagtcccaactgcattatctgaaactattacaaaacca
ttctgtaaaccattcaaaaatgtctgtcaacccagtactaaagagaatatgctcaaagat
tctcaaagctgcaaacctcgccatgatccaaatgcgccaaattctctagttatgccacga
ccaaattcaagtcatcagtggatgttcaataaggctgttttacctgtggtggatgtagtt
gtagatccttacattgcaaataatctccgccaacatcagaaagaaggaattatattttta
tatgaatgtgtaatgggaatgagagttagtggcagatttggagctattcttgctgatgag
atgggcttaggaaaaacactgcaatgcattgcacttgtctggactcttctccgtcaaggg
ccctatggatgcaaacctgtgctaaagcgagcactggtggtcacccctgggagtctggtg
aaaaactggaaaaaggaatttcagaaatggttgggaagtgaaaggatcaaagtctttaca
gttgatcaggaccacaaagtagaagaattcatcggttctccactttattcagttatgata
atcagttacgagatgctgctgcgatctttggatcaaattcaggctgtagaatttaacctc
ctaatctgtgacgaaggacatcgtctgaaaaatagcactattaagacaactacagccctt
actagtctgtcttgtgagaggagaattatccttactggtactccgatccaaaatgacttg
caagaattttatgcattaatagagtttgtgaatccaggaatactcggttctctatccacg
tatagaaagatatatgaggaaccaattgtcagatctagagaaccttcagcaacagaggag
gaaaaggaattaggagtaaaaagagcagcagagctcacacgcctcactagactctttatc
ctaagaagaacacaggaggttataaacaaatttctgccccccaaaaaggagagcataatc
ttctgccgaccaacagcgctgcagcttgaactgtatcgaaaactgcttagctctcatgtt
attacatcctgtctacaaggcagactagaaaatagtcctcacctaatgtgtataggtgct
ttgaaaaaactttgcaatcatccatgtcttctctttaaagctataaaggaaaaaagccat
gatcctatgtctgaggactatgatgagtccagcctctatgaaggtgtaatagatgtcttc
ccacaaggttacactttggacactttctctgaaactgattcaggaaaattgcaggtgctg
gtgaagttgttagcagcaatccatgagctcaactcttctgaaagagtcgtgttggtatcc
aattacactcagacattaaacgtattacaagacgtatgcaaacattatggatactcctat
actagacttgatggacatactcctgtctcccagagacaacatattgtcgatacttttaac
agtaaattcagcccagcttttatctttttgctgagttcaaaggctggtggagtaggactg
aacctggttggagcatctcatttgatcctgtatgatatcgattggaatccagctacagat
attcaggcaatggctagagtctggagagatggtcagaaacatactgttcatatctacagg
ctgctaaccacaggctcaatagaagaaaagatttatcaaagacagatcagcaaacaagac
ctttctggggcagttgtagacctttccaagacatctgaacacacacatttttctattgag
gagcttaaaaatctctttactcttcatgaagattccagctgtgttactcatgacttgctt
gagtgtgactgtatgggaaagattgaccatcacaatacttcctcagaaaagcctcccata
tctagaagctgccagcttgaacaaaaccatgggaagcctaattcaaagaaaccactttcc
atgtcacagttgatgcagtggaagcatttctctgggcaacatcagactcttgctgatcct
ttccttgaaaggataaaagagaatgtttctttcatttttcagaatgtaaccaattctact
tccccacctaatgagacttaa
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