Aphelocoma coerulescens (scrub jay): 138105386
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Entry
138105386 CDS
T10543
Symbol
CTHRC1
Name
(RefSeq) collagen triple helix repeat-containing protein 1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
acoe03037
]
138105386 (CTHRC1)
Cilium and associated proteins [BR:
acoe03037
]
Other cilia and associated proteins
Stereociliary proteins
138105386 (CTHRC1)
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Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
138105386
NCBI-ProteinID:
XP_068861387
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Position
2:147599278..147608581
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AA seq
239 aa
AA seq
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MPRAPAAAAPLLLLLALLLAAAPPHGGSESPKGKQKALRQREVVDVYNGMCLQGPSGVPG
RDGNPGANGIPGTPGIPGRDGLKGEKGECMRESIEESWTPNFKQCSWSALNYGIDLGKIA
ECTFTKMRSNSALRVLFSGSLRLKCRNACCQRWYFTFNGAECAGPLPIEAIIYLDQGSPE
LNSTINIHRTSSVEGLCEGINAGLVDIAIWVGTCSDYPRGDASTGWNSVSRIIIEELPK
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcgccccggccgccgccgccccgctgctgctgctgctggcgctgctgctggcg
gcggccccgccgcacggcggctccgagagccccaaggggaagcagaaggcgctccgccag
cgggaggtggtggacgtgtataatggcatgtgcttacaaggccccagtggcgttcctgga
cgggatggaaacccaggagccaatgggatccctgggacacctgggattccgggacgggat
gggctgaaaggggagaagggcgagtgcatgcgggagagcatcgaggagtcctggacaccc
aacttcaagcagtgctcgtggagtgcgttaaattacggcatcgaccttgggaagatcgcg
gaatgtacctttaccaagatgcggtcgaacagcgctctgcgcgtgctcttcagcggctca
ctgcggctcaagtgcaggaacgcctgctgccagcgctggtacttcactttcaatggggca
gagtgtgctgggccacttcctattgaagccatcatatacctagaccaaggaagcccggag
ctgaattctactattaacatacaccgaacttcctcagtggaaggtctgtgcgaagggatc
aatgctggcttggtggatattgccatctgggttgggacttgctcagattatccacgggga
gatgcttctactggatggaattcagtctcccgaatcatcattgaagaactgccaaaataa
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