Aphelocoma coerulescens (scrub jay): 138105430
Help
Entry
138105430 CDS
T10543
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138105430 (SNTB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
138105430
NCBI-ProteinID:
XP_068861501
LinkDB
All DBs
Position
2:complement(155229956..155343051)
Genome browser
AA seq
522 aa
AA seq
DB search
MAVAAAGGGGGGRAQRSGWLEVLVRERWHKVLANLGGEALVLSGEERPDGAAHNGLGGDG
TACRGAEGGGGPAAVRTAFTDPPEQVPEAISNKKRCVKVLKQELGGLGISIKGGKENKMP
ILISKIFKGLAADQTQALYVGDAILAVNGTDLRDATHDEAVQALKRAGKEVLLEVKYMRE
ATPYVKKGSPVSEIGWETPPPESPRLGCASADPMSQLSLSIHRDRKTIPLKMCYVTRNMT
VSDPENRIIEVHSPDAKHTVVLRSKDSATAQAWFNAIHSSVNELIPRVIAEVRDQLGKTG
IAGSREIRHLGWLAEKVPGDNEKHWKPVLVVLTEKDLLIYESMPRMKEAWFSPVHTYPLL
ATRLVHSGPGKGSPKSGVDLSFATRTGTRQGIETHLFRTETSRDLSLWTRSVVQGCHNSA
ELITEITTSCTYKSQECRLTIHYEHGFSLTTEPQDGAFSKTIAQYPYEKLKMSSDDGIRM
LYLDFGEKDGEIQLDLHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcggcgggcggcggcgggggcggccgggcgcagcgcagcggctggctg
gaagttttggtgcgggagcgctggcacaaagtgctggccaacttgggcggcgaggcgctg
gtgctgagcggcgaggagcgccccgacggcgcggcccacaacgggctgggcggcgatggg
acggcgtgccgcggggccgagggcggcggggggccggcggcggtgcgcaccgccttcacc
gacccccccgagcaggtgcccgaggccatctccaacaagaagcggtgcgtgaaggtgctg
aagcaggagctgggcggactgggcatcagcatcaaggggggcaaggagaacaagatgccc
atcctcatcagcaaaatcttcaaggggctggcggccgaccagacccaggccctctacgtg
ggcgatgccatcctggccgtgaacggcaccgacctgcgggatgccactcacgacgaggcg
gtgcaggcgctcaaacgggccggcaaggaggtgctgctggaagtgaaatacatgagagaa
gcaaccccctatgtgaagaaaggctcccccgtgtcagagattgggtgggagacgcctccc
cccgaatctccgcgcctgggctgtgcctctgctgacccgatgtcgcagctttcgctctcc
atccacagagacaggaagacaattcccctcaagatgtgctacgtgacacgcaacatgacg
gtgtcagaccccgaaaacagaattattgaagttcattcacctgatgccaagcacaccgtg
gtgctcaggagtaaggattcagctacagcccaggcctggttcaatgccatccactccagt
gtcaatgagctcatccccagggtgattgctgaggtcagagaccagctgggtaaaacaggg
attgctggaagtcgagagattaggcatctaggctggcttgcagaaaaggtgccaggagac
aacgagaagcactggaagccagtgttagtggttttgacagagaaagacctcttaatatat
gagagcatgccacggatgaaggaagcttggttcagccctgtgcatacctaccccctgctc
gccaccaggttggttcattctggcccaggaaaaggctcaccgaagtcaggggtggatttg
tcttttgcaacccgtaccggtacaagacaagggattgaaacccatctgttcaggactgag
accagtcgagacctctcactgtggacgaggagtgtagtgcagggctgccacaattctgca
gagctcatcacagaaatcaccacatcttgcacatacaaaagccaggagtgccgtttgacc
atccattatgaacatggattctctcttacaactgaaccacaagatggtgccttctccaag
acaattgcacaatatccctatgaaaaactgaaaatgtcctcagatgatgggataaggatg
ctttatttagactttggagaaaaagatggagaaattcaactggaccttcattcctgtcca
aaaccaattgttttcatcattcattccttcctgtcagcaaagatcacgagactgggcttg
gtggcataa
DBGET
integrated database retrieval system