Aphelocoma coerulescens (scrub jay): 138105493 Help Entry 138105493         CDS       T10543                                  Symbol COL22A1 Name (RefSeq) collagen alpha-1(XXII) chain   KO K16630   collagen type XXII alpha Organism acoe  Aphelocoma coerulescens (scrub jay) SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen VWA VWA_2 Laminin_G_2 Laminin_G_3 Motif Other DBs NCBI-GeneID:  138105493 NCBI-ProteinID:  XP_068861633 LinkDB All DBs Position 2:complement(163162090..163362719) Genome browser AA seq 1616 aa AA seqDB search MDMSMMGRCCVLHLLVLLTFMFSGERTEAQRAGCKSVHYDLVFLLDASSSVGKEDFEKVR QWVSNLVETFEIGPDKTRVGVVRYSDHPTTEFDLGKYKTREEIKEAARKIQYYGGNTNTG DALRYITTYSFSKEAGGRLSDRTVKKVAILLTDGRSQDFVLDPATAAHQAGIRIFAVGVG EALKEELDEIASEPKSAHVFHVSDYNAIDKIRGKLRRRLCENVLCPNVHVEGDRFKHTNG GTDEIPGFDLMDSFSVKQIFGMKEDGIQSAYVRLGSFPVVQKTEDVFPQGLPDEYAFVTT FKFRKASRKEDWYIWQIIDKYGIPQVSIRLDGENKAVEYNAVGLTKDAVRVVFRNTRVSD LFDRNWHKIALSIQAKAVSLYIDCKLVQMLPIEDRENIDIQGKTVIGKRLYDSVPIDFDL QRMVIYCDSRHAELETCCDIPSGPCQVTVLTEAPPLEVRPTAGSEQVGHLKIFNCSCPPG QKGERGPLGFEGPKGQKGERGIPGLPGLRGEKGESGKAYGIGEKGEKGEEGFPGFPGLKG DKGEKGSLGSPGPPGRDGAKGEAGEPGQPGAFGLPGPAGPKGSEGKQGPPGIKGYVGAPG LQGERGEKGTRGDKGERGLDGFPGKPGVEGKQGPPGSPGPPGASGTKGEKGEPGLPGLPG TLVHTEGLKGEEGKPGPRGPQGQPGLPGPPGQPGLEGKPGVPGLPGQRGKKGEPGFPGIN GLIGPQGPPGPPGIAGPLGPPGPPGLPGEIGVSGKTGPPGPAGLPGKDGLNGLPGLPGLK GERGEKGEEGFPGKAGPKGEPGSRGQPGEQGEAGFPGPRGLPGLRGEKGDRGEKGRDGLP AMKGERGEKGDTGSPGPPGLPGTTAFFTPHPRIPGEPGPKGDKGDQGMSGEPGLPGVPGE QGVPGPAGLQGAKGEKGAQGEAGAPGETGLSGPAGPPGPRGLPGNVGVPGGPGLPGKAGE KGERGDPGKEGKVGLPGPPGEPGRAGEPGLPGKGKDGERGERGPPGLPGPFGHKGERGAP GLPGQPGDRGVPGIGLAGPPGPVGPPGDKGSLGPRGVPGIPGPQGPPGQDGVPGNPGERG PPGKPGSPPLLTPEDINLLVKDVCSECPPGPPGLPGIPGFKGDKGLRGPPGRDGQDGKMG IAGPRGPPGPPGLDGPKGAKGDRGMTGEVGEKGEQGHPGMPGFSGAPGNPGPPGSDGVPG PIGPAGNPGDMGKDGPPGPQGPPGLPGLPGIAGNDGKDGKPGSLGEPGKPGEQGLPGREG ARGLPGFKGQRGDTGPPGPRGEPGVTGPAGREGPPGKDGDPGPIGPQGPRGLRGQPGKNG LPGSAGEPGPAGIPGPKGNKGETGSPGLPGFIGPRGPPGEPGEKGPPGKEGAPGKQGAIG SKGERGEPGFKGEKGPQGEKGPPGDPGIPGHKGHPGLMGPHGPPGDTGQVGPPGPPGQPG FPGPRGEPPSLETLRRLIQEELSKQLDAKLPYILAQIQPAQVKASHGRPGPPGPPGKEGL PGRTGPPGEPGRPGQTGSEGPPGPAGPKGERGAKGEKGDTGIGQRGEMGPPGIPGLPGEP GYAKDGMPGPPGPQGEAGVPGLAGPQGPPGASGQCDPSQCAYYASLAARPSNVKGP NT seq 4851 nt NT seq  +upstreamnt  +downstreamnt atggatatgtccatgatgggaaggtgctgtgtgctccatctcttggttcttctcacattc atgttcagcggggagagaaccgaggcacaaagagcaggttgcaaaagtgttcactacgac cttgtcttcctcttggatgcctcctccagcgttggaaaagaagattttgagaaagttcgt cagtgggtgtctaatttggtggaaacttttgagattgggccagacaaaacccgtgtaggt gtggtgcgatacagcgatcatccaaccacggagttcgacctgggaaagtacaaaacccgt gaggaaatcaaagaggctgcacgaaagattcagtattatgggggtaacacgaacactggc gatgctctcaggtacatcaccacctacagtttttccaaagaagctggtgggagacttagt gatcgaactgttaaaaaggtggctatccttttgactgacggaaggagccaggattttgtc ttggatccagccactgcagcccatcaggctgggattaggatttttgctgtgggtgttgga gaagccttaaaagaggaactcgatgagattgcttcagagcccaagtctgctcacgtgttt catgtctctgattacaacgccatcgataaaattcgggggaagctgaggaggcgtctctgt gagaatgtcctgtgcccaaatgtccacgtggaaggagatcggttcaaacacaccaacggg ggcactgatgaaattccaggatttgacctgatggattcgttcagcgtgaagcagattttt ggaatgaaagaagatgggattcagagtgcttatgtacggcttggaagctttccggttgtt cagaaaactgaggatgtatttccacaaggcctgcctgatgaatatgcctttgtaactact ttcaaattccggaaggcttccaggaaagaagactggtatatctggcagattatagacaag tacggcataccccaggtctcgatccggctggatggagagaacaaagctgtggagtacaac gccgttggactcaccaaggacgctgtcagggtggtcttccgaaacacacgggtcagtgac ctgtttgaccgcaactggcacaaaatcgccctcagcatccaggccaaggctgtctcgctg tacatagactgcaagctggtgcagatgctgcccattgaagacagggagaacattgacatt cagggaaagactgtgattggcaaacgcttgtatgacagtgtccccattgattttgatctt cagcggatggtgatttactgtgattcccggcacgccgagctggagacctgctgcgacatt ccctctggaccatgccaggtcacggtcctgacagaagcacctcccctggaagtgaggccc actgctggcagtgagcaagttggacatctgaagattttcaactgctcctgtcctcctgga caaaagggggagaggggtccacttggctttgaaggtcccaaaggtcaaaagggagaaaga ggcatcccagggctccctggactccgaggagaaaaaggagagtcaggcaaagcctatggc ataggagaaaaaggagaaaagggtgaagaagggttccctggttttcctggactgaaaggg gacaaaggagaaaaaggttccctgggctcacctggcccccctgggagggatggagcaaaa ggagaagccggtgaaccaggacagccaggagcatttggactgcctgggccagcaggtcca aagggatccgagggaaaacagggtcctccaggcattaaaggctacgtaggtgcaccgggt ctacaaggagaaagaggagaaaagggaacacgaggagacaagggagagagaggcctggat gggttccctggaaagccaggtgtggaggggaaacagggccctcctggcagccctggcccc cctggtgctagtgggaccaaaggagaaaagggtgaaccaggacttccaggattgcctggc actttagtgcatactgaaggcctaaaaggagaggaaggaaagcctgggccacgaggacca caaggccaacctggacttcctggacctccaggacagcctggtctggaaggcaagcctgga gtccctggtttgccaggtcaaaggggtaaaaagggagaaccaggattcccaggaatcaat ggtcttattggacctcagggacctccagggccccctggcattgctggacccctgggacca cctggaccaccgggacttccaggagagattggagtttctggtaaaaccggaccacctgga ccagctgggctgcctggcaaagatggactcaatgggcttcctgggcttccaggtctaaag ggagaacgaggggaaaagggtgaggaaggctttcctggaaaagctggccctaagggtgaa cctgggagccgtggccaacccggtgagcagggtgaagcaggttttcctggccctaggggc ttaccaggactgagaggagaaaaaggagaccggggagaaaaaggaagagatggtctccca gcaatgaaaggtgaaagaggagaaaagggtgacacaggttcccctggaccaccaggctta cctggaacaacagccttcttcaccccacaccccaggattcctggtgaacctggaccaaaa ggggacaaaggagatcaaggaatgagtggagaacctggattacctggggtcccaggtgaa caaggtgtgccaggacctgcaggactacagggtgcaaagggggagaaaggagctcaagga gaggctggagctcctggagagactggtttgagtggaccagcagggcccccaggtccaaga ggcttgccaggaaatgtgggtgtgcctggaggccctggactcccaggaaaggcaggagaa aagggggaaaggggtgatcctggaaaagaaggaaaagtgggtttacctgggccacctggt gagccagggcgtgctggagagccaggtttgcctgggaagggtaaagatggagaaaggggg gaaagaggaccaccaggcttgccaggaccctttggacataagggtgagaggggagctcct ggcctccctggacagccaggagacagaggagtgccaggaatcggcctggctggaccccct ggccctgtgggacccccaggagacaaagggtcactgggtccccgtggtgtacctggtatc cctggaccacaagggcctcctggccaggatggtgtacctggaaatcccggggaaagagga cctcctggaaaacctggttccccacccctgctcactccagaggatataaatctcctagta aaggatgtgtgcagtgagtgccctcctggcccaccaggactgccaggcatcccaggtttc aaaggggataaaggtcttcgaggaccaccaggtagagatggccaggatgggaaaatgggg attgctggtcccagaggtcctccaggcccacctgggctcgatggcccaaagggtgctaaa ggagaccgtggtatgactggggaagtaggagaaaaaggtgaacagggccaccctggaatg cctggcttctcaggggctcctggaaaccctggtccacctggatcagatggggtgccagga ccaataggacctgcaggaaaccccggagacatgggcaaggatggtcccccaggtccacag ggcccaccagggctgcctggacttccaggaattgctgggaatgatggcaaagatggcaaa ccaggatctctgggggagccgggaaagcctggagaacaagggctcccaggccgggagggt gccagaggattaccgggtttcaaaggacagagaggagatacaggtcccccaggtcctcgg ggggagccaggtgtgacaggtcctgctggtcgtgaggggccaccagggaaggatggtgat cctggtcccatagggccacagggccctcgaggactccgagggcagccgggcaagaatgga ttgcctggatctgcaggagaacctggcccagcaggtatcccaggtcccaaaggaaataaa ggagaaacaggcagcccaggactccctggctttataggaccccgaggaccacctggagaa cccggagaaaaaggtcctcctggaaaagagggtgcaccaggaaaacagggtgcaattggc tccaaaggagagaggggtgagcctggtttcaaaggtgaaaaaggccctcaaggagaaaag ggacctccaggtgatcccgggatacctggtcataagggtcatccaggactgatgggtccc catggacctccaggagacactgggcaagttggacctcctggtcctccgggacagccagga tttccaggaccaaggggagaacccccatctctagagactttgaggagactcatccaagag gagttatccaagcagcttgatgcaaagttgccctatatcctggctcagatacagcctgca caggtaaaagcatcccatggcagaccaggacctcctggtccccctgggaaggaaggactt ccaggaagaactggccctccaggagagcctggccgacctggacagactgggtctgaaggg ccacctggaccagctggtcccaaaggagaaagaggagcaaagggtgagaagggagacact ggtattggccagagaggggaaatgggtcctccaggaattccaggcctcccaggggagcct ggttatgccaaagatgggatgccaggacctcccggccctcaaggtgaagccggtgtgccg ggtctggcaggtccccagggacccccaggagccagtggacagtgtgacccctctcaatgc gcttactatgcaagcctggctgcccggccctccaacgtcaaagggccatag

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