Aphelocoma coerulescens (scrub jay): 138105556 Help Entry 138105556         CDS       T10543                                  Name (RefSeq) sharpin   KO K10630   RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:2.3.2.31] Organism acoe  Aphelocoma coerulescens (scrub jay) Pathway acoe04217   Necroptosis acoe04621   NOD-like receptor signaling pathway Brite KEGG Orthology (KO) [BR:acoe00001]  09140 Cellular Processes   09143 Cell growth and death    04217 Necroptosis     138105556  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     138105556  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:acoe04121]     138105556 Enzymes [BR:acoe01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.31  RBR-type E3 ubiquitin transferase      138105556 Ubiquitin system [BR:acoe04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    RBR proteins     138105556   Multi subunit type E3    LUBAC complex     138105556 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sharpin_PH zf-RING_2 Zn_ribbon_RanBP zf-RING_5 ubiquitin IBR zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 IBR_1 zf-RING_11 Ubiquitin_2 Motif Other DBs NCBI-GeneID:  138105556 NCBI-ProteinID:  XP_068861795 LinkDB All DBs Position 2:168897011..168923214 Genome browser AA seq 689 aa AA seqDB search MAARAELAAPCRLLPAAGAALRLQLSVEPGAHGRRRFRLGLRLPEAGGGAPLAEFDLRDV SYRVCGPTSHELELPPAGAAGLGSSGSSGSSGAAGSSGAAGSGSAGSAGTVALRFPEERE AQQWWTVLSSSLREARRAPDGDAGTSPVPPAAEADPEEARTLELAQREELALRLAEAIAF GDEAVAAQSAAALARQHAELSVRLRDGPAPDVSMPVGVEDATSSASITLRVQPHITIGTL KEQVFREYGFHPLAQRWIIGQSLCSDGRSLGSYGIRRDGDPAFLFLLSARAAGLSPQRYR EQQAHGLLRALALDAPADAAGDAGTSPGTGRGPEPPERVDIGDMRDHLDSLQLWDGAGTP PAAPEPRPPSPEQAGWPCPRCTFLNKPTRPGCEMCSSPRPEGYRVPGGHRPDPAEQQRLQ REQDGTRQCQQALEAERQRNFQQLLRAEEAELVPNPEPLECGICLQPVPAGRGVLLRDCL HSFCRECLRQVITYSEEPLVPCPFRDATYACASHLQEREIRALLSPEEHARFLARGLALA ERRSRNSFHCRGRDCPGWCFYEDAVNEFPCPVCGALNCLLCKAIHEGQNCRQYQDELQLR ALDDAAARQTRDMLQTLVQRGEAMHCPTCRIVVQKKDGCDWIRCTVCQTEICWVTKGPRW GPAGPGDTSGGCRCNINGQRCHPQCQNCH NT seq 2070 nt NT seq  +upstreamnt  +downstreamnt atggcggcccgggccgagctggccgcgccctgccgcctcctgcccgccgccggcgccgcg ctccgcctgcagctcagcgtggaaccgggagcccacggccggcgccgcttccgcctgggc ctgcggctgccggaggcggggggaggcgcgcccctggccgagtttgacctgcgggacgtc tcctaccgcgtgtgcggccccacgagccacgagctggagctgccgccggccggagcagcg ggactgggatcctcgggatcctcgggatcctcgggagcagcgggatcctcgggagcagcg ggatcgggctcagcgggctcagcggggacggtggcgctgcggttccccgaggagcgcgag gcccagcagtggtggacggtgctgagcagctccctcagggaggcgcggagagcgcccgac ggtgacgcggggacatcgccggtgccgcccgcggccgaggcggacccggaggaggcgcgg accctggagctggcgcagagagaggagctggcgctgcgcctggccgaggccatcgccttt ggggacgaggctgtggcggcgcagagcgcggcggcgctggcccggcagcacgcggagctg agcgtgcgcctgcgggacggccccgcgcccgacgtcagcatgccggtgggggtggaggac gccacgtcctcggccagcatcaccctgcgggtgcagccccacatcaccatcggcacgctc aaggagcaggtgttccgcgagtacggcttccacccgctggcgcagcgctggatcatcggg cagagcctgtgctcggacgggcgcagcctgggctcctacgggatccgccgcgacggggac ccggccttcctcttcctgctgtcggcgcgggcggcggggctgagcccgcagcgctaccgg gagcagcaggcgcacggcctgctccgcgccctggcgctggacgcgcccgccgacgccgcc ggggacgcgggcacctcgcctggcacaggccgtggcccggagcccccggagcgggtggac atcggggacatgcgcgaccacctggactcgctgcagctctgggacggcgccgggaccccg cccgcggcccctgagccccgcccgccctcacctgagcaggcgggctggccgtgcccccgg tgcacgttcctgaacaagcccacgcgccccggctgtgagatgtgcagctccccccggccc gaggggtaccgggtgcccggggggcaccgccccgaccccgcagagcagcagcggctgcag agggagcaggacgggacccgccagtgccagcaggcgctggaggcggagcggcagcggaac ttccagcagctgctgcgggcggaggaggcggagctggtgccgaacccggagccgctggaa tgcgggatctgcctgcagccggtgccggcgggccggggggtgctgctgcgggactgcctg cacagcttctgccgggagtgcctgcgccaggtgatcacctacagcgaggagccgctggtg ccctgtcccttccgcgatgccacctacgcctgtgccagccacctgcaggagcgcgagatc cgcgcgctgctgtcccccgaggagcacgcgcggttcctggcgcgggggctggcgctggcc gagcgccgcagccggaacagcttccactgccgcggccgcgactgccccggctggtgcttc tacgaggacgccgtcaacgagttcccgtgcccggtgtgcggggccctcaactgcctcctg tgcaaggccatccacgagggccagaactgccgccagtaccaggacgagctgcagctgcgg gcgctggacgacgcggccgcgcgacagacgcgggacatgctgcagacgctggtgcagcgg ggggaggccatgcactgccccacgtgccgcatcgtggtgcagaagaaggacgggtgcgac tggatccggtgcaccgtgtgccagaccgagatctgctgggtcaccaagggaccccgctgg gggccggcgggccccggtgacaccagtggcggctgtcgctgcaacatcaacggccagagg tgccacccccagtgccagaactgccactga

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