Aphelocoma coerulescens (scrub jay): 138105727
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Entry
138105727 CDS
T10543
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoe03019
]
138105727 (TRIM71)
04121 Ubiquitin system [BR:
acoe04121
]
138105727 (TRIM71)
Enzymes [BR:
acoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138105727 (TRIM71)
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138105727 (TRIM71)
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
138105727 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-C3HC4
zf-RING_UBOX
DUF4094
Motif
Other DBs
NCBI-GeneID:
138105727
NCBI-ProteinID:
XP_068861929
LinkDB
All DBs
Position
2:complement(50846754..50903926)
Genome browser
AA seq
879 aa
AA seq
DB search
MASFPESDFQICPLCKEMCGSPAPLSSNSSTSSSSSQTSSSSGGGGGSSCGGPPRRLHVL
PCLHAFCRQCLEAQRHPGAGDALKLRCPICDQKVVISEPSGMDALPSSNFLLSNLLDVVV
VAAAADEQKNGRAAGAGPAAGSSAGGGGGNNRHHGRPPPGPSRAAGSSPAAAASAAPSST
SSSSSSSGGGGGSAALLLRRPHSRQGEPRCSSCDEGNAASSRCLDCQEHLCDNCVRAHQR
VRLTKDHFIERFAAGSAAAGPAAPLALSPPYPASPYNILSVFPDRASYCQHHDDEVLHFY
CDTCSVPICRECTMGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAV
AEQVEMKAKVVQSEVKVVTTRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLN
KLDNTISAVQQVLEEGRTMDILLARDRMLAQVQELKNVRGLLQPQEDDRIMFTPPDQALY
MAIKSMGFVSSGAFAPLTKATGEGLKRALQGKVASFTVIGYDHDGEPRLSGGDMISAVVM
GPDGNLFGADVSDQQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVVVKSGRSYIGI
GLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTLGSR
PGQFDRPAGVACDISRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAVN
AEGKILVSDTRNHRVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNH
RLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLC
KFGTQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttcccgagtccgacttccagatctgcccgctgtgcaaggagatgtgcggc
tcgccggctcccctgtcgtccaactcctccacctcctcgtcctcctcgcagacctccagc
tcctccgggggtggcggcggctcctcctgcgggggcccgccgcggcggctccacgtcctg
ccctgcctgcacgccttctgccgccagtgcctggaggcgcagcggcaccccggcgcgggg
gacgcgctcaagctgcgctgccccatctgcgaccagaaggtggtgatctcggagccctcg
ggcatggacgcactgccctcctccaacttcctcctcagcaacctgctggacgtcgtcgtc
gtggccgccgccgccgacgagcagaagaacggccgtgccgccggggccggccccgccgcg
ggctcgagcgccggcggcggcggcggcaacaaccggcaccacggccgcccgccgccgggg
ccgtcccgcgccgccggctcctcgcccgccgccgccgcctcggccgcgccctcctcgacg
tcgtcgtcgtcctcctcctcgggcggcggcggcggctcggcggcgctcctgctgcggcgg
ccccacagccggcagggcgagccccgctgcagctcctgcgacgagggcaacgccgccagc
tcccgctgcctcgactgccaggagcacctgtgcgacaactgcgtgcgggcgcaccagcgc
gtccgcctcaccaaggaccacttcatcgagcgcttcgccgccggctccgccgccgccggt
cccgccgcgccgctcgccctcagcccgccctaccccgcctcgccgtacaacatcctctcc
gtcttccccgaccgggccagctactgccagcaccacgacgacgaggtactgcatttctac
tgtgatacctgttctgtccccatatgtcgggaatgtaccatgggacgacatgtgggtcac
agctttatctacctccaagatgccctacaggattccaggactctcaccattcagctcctg
gcagatgctcagcaaggacgacaggctattcaactgagtattgaacaggcccaggctgtg
gcagagcaagtcgagatgaaagcaaaggtggtgcagtctgaagtcaaagtagtgaccact
agacataagaaggccttggaagagcgggagtgtgagctgctctggaaggtggaaaagatt
cgccaagtcaaggccaagtcactctacttgcaagttgaaaagttacgtcagaacctaaac
aagctggataacaccattagtgctgtacagcaggtcctggaggagggtcgtaccatggat
attcttctggctcgggaccgcatgctggctcaggtgcaggagctgaagaacgtcagaggc
cttctccagccacaggaagatgacaggatcatgttcacccctcctgaccaggcattgtat
atggccattaaatctatgggctttgtcagcagcggggcttttgctcccttgaccaaagcc
acgggggaaggtctcaagcgtgctctgcagggcaaggtggcctctttcactgtgatcggc
tacgaccacgatggggagcctcgcctttcagggggtgacatgatctctgcagtggtcatg
ggcccagatggaaacctttttggggcagacgtcagcgatcagcagaacggaacctacctg
gtcagctaccgtccccagctggagggagagcacctggtgtccgtgatgatgtgcaaccaa
cacattgagaacagccccttcaaagtggtggtgaagtctgggcgcagctacattggtatc
gggctgccggggctgtccttcggcagcgagggagacagcgatggcaagctctgccgcccc
tggggggtcagcgtcgacaaagagggctacatcattgtcgccgaccgcagtaacaaccgc
atccaggtgttcaagccatgcgggaccttccatcacaagtttggcacgctgggctcccgg
ccgggccagttcgatcgccctgccggcgtggcctgtgacatttcgcgtaggatcgtcgtg
gccgacaaggacaatcatcgcatccagatcttcacgtttgaggggcagttcattctgaag
tttggggagaaaggaacaaagaacgggcaattcaattatccatgggatgtggctgtcaac
gcagagggcaagatcctggtctctgacacgaggaaccatcgcgttcagctgtttgggccc
gacggtgtgttccttaacaagtatggcttcgaaggggcactctggaagcactttgattcc
cccagaggtgtgacattcaatcacgagggccacttggtagtgacagacttcaacaaccat
cgcctcctggtcatacatccagattgccagtcagcacgcttcctgggctccgagggcacc
gggaacggccaattcctgcgcccgcagggagtggccgtggatcaggaagggcgcatcatt
gtggccgactccaggaaccaccgggtgcagatattcgagtccaatggtagctttttatgc
aaatttggcactcagggaagcggctttggtcagatggaccgtccttcaggtatagctgtc
acccctgatggaatgattgttgtggtcgactttggaaacaatcgaattctcgtcttctaa
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