Aphelocoma coerulescens (scrub jay): 138106083
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Entry
138106083 CDS
T10543
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
acoe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138106083 (SMARCD3)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138106083 (SMARCD3)
PBAF complex
138106083 (SMARCD3)
GBAF(ncBAF) complex
138106083 (SMARCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138106083
NCBI-ProteinID:
XP_068862191
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Position
2:complement(120682..198227)
Genome browser
AA seq
503 aa
AA seq
DB search
MKLQEGLAKLRKANFLSFWSMGCSDESLMKPWGAASDSCLQSWLRPGMPSGARMPHQGGP
MGPPGPPYVGSPSVRPGMPQTVMETTRKRTAPQQVQQQQVQQQVQQQQQATQNRARSAKR
RKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLY
ISNTFNPAKSDADDSDGSIASWELRVEGKLLDDLSKQKRKFSSFFKSLVIELDKDLYGPD
NHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTR
SAIIQALWQYIKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIV
INHIISVDPNDQKKTACYDIDVEVEDPLKGQMSSFLLSTANQQEITALDNKIHETIESIN
QLKIQRDFMLSFSKDPKGYIQDLLRSQSRDLKVMTDVVGNPEEERRAEFYHEPWSQEAVS
RYFYCKIQQRRQELEQSLGVRNT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaagttacaggaggggctcgcaaagctacgaaaagcaaactttttgagtttctggtcc
atggggtgttctgatgagagcctgatgaagccttggggtgctgcctctgattcttgtctc
cagtcttggctccgccctgggatgccatcaggagctcgaatgccccatcaggggggtccc
atgggtcctccaggccccccatacgtcggaagcccctccgtgcgacctgggatgccccag
actgtgatggaaacaacaagaaaacgcactgcaccacagcaggtccaacagcagcaggtg
cagcagcaggtgcagcagcagcagcaagccactcagaaccgagctaggagtgccaagagg
aggaagatggctgacaaaattctccctcagaggatccgggagctggttcctgagtcccag
gcctacatggatctcttggcctttgaacgcaaactagaccagaccattatgaggaagcgc
gtggatattcaggaagcactgaagaggccaatgaagcaaaagcggaaactgagactttac
atctccaacacatttaatcctgcaaaatcagacgctgatgactctgatggcagcattgct
tcgtgggagctgcgcgtggaggggaagctcctggatgatctcagcaaacagaaacggaag
ttttcatctttttttaagagtttggttatcgaactggacaaagatctttatggacctgac
aatcatcttgtggagtggcacagaactcccacgacccaggaaacggatggcttccaggta
aagagacctggggatgtcagtgtgcgatgcacgttacttctcatgttggactaccagcct
ccccagtttaaattggacccacggttggcccgtctgctggggatccacacgcagacacgc
tcagccatcatccaggctctctggcagtacatcaaaacaaacaagctgcaagactcccac
gataaggaatacattaactgtgacaagtacttccagcagatctttgactgtccacggcta
aagttttctgaaattcctcagaggctcactaacctactgctgccaccagacccgatagtg
ataaaccacatcatcagtgttgaccccaacgatcagaagaagacggcttgttatgacata
gatgtagaagttgaagacccattaaagggccagatgagtagttttcttctctcaacagct
aaccaacaggagattacagcattggataacaagattcatgagacaattgagtccataaat
cagctaaaaatacaacgtgattttatgctgagtttctccaaggatcctaaaggatacatc
caagaccttctccggtcccaaagtagagatcttaaggtgatgactgatgtggttggaaac
ccggaggaagaacgcagagccgaattttatcacgagccatggtctcaagaagctgtgagc
agatatttctactgcaagatccagcagcgccgacaggaattggaacaatctttgggagtg
cgtaacacataa
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integrated database retrieval system
