Aphelocoma coerulescens (scrub jay): 138106184
Help
Entry
138106184 CDS
T10543
Symbol
CYFIP1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04810
Regulation of actin cytoskeleton
acoe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
138106184 (CYFIP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
138106184 (CYFIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoe03019
]
138106184 (CYFIP1)
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138106184 (CYFIP1)
Factors involved in mRNA localization
Other mRNA localization factors
138106184 (CYFIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
zf-CW
LRIF1
Motif
Other DBs
NCBI-GeneID:
138106184
NCBI-ProteinID:
XP_068862437
LinkDB
All DBs
Position
1:complement(33852566..33930875)
Genome browser
AA seq
1253 aa
AA seq
DB search
MTAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAIMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVIVGYEELLAD
IVNLCVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLAKIDKYFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSSSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLSLQGLQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YAALQDFAQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWEAGHEPFNDPALRGEKDPK
SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGS
LLLDKRLRSECKNQGATIQLLQSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYRSM
ELAIGRFESEDLTSIVELDGLIEVNKMTHKLLSRYMTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLYGSKALNLAYSS
IYSNYRNFVGPPHFKVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLIEQSLSLEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYASLHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRIRSFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFDVLDFCYHLLKVQKHDGKDEVIKNVP
LKKMVERIRKFQILNDEIIAILDKYLKSGDGESTPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgactgctcaagtaactctggaggatgccttgtccaatgtggatctcttggaggaatta
ccattgccagatcagcaaccatgtattgagcccccaccatcatctcttctttaccagcca
aacttcaacactaactttgaagacagaaatgcatttgtcactgggattgcaagatacatt
gagcaagctacagtccattctagcatgaatgaaatgctagaagaaggtcaggaatatgca
attatgttatacacatggagaagctgctcaagagccattccccaggtcaagtgcaatgag
cagcctaacagagtagaaatttatgagaaaactgtggaagttctggagccagaagtcaca
aaactgatgaattttatgtattttcagagaaatgcaattgaacggttttgtggggaggtg
agacgcttgtgccatgcggagagaaggaaggactttgtgtctgaagcgtatctgatcaca
ctgggaaaattcatcaatatgtttgctgtgttggatgaattgaaaaatatgaagtgcagt
gtgaagaacgaccactcagcctacaagcgagctgctcagttcctgcggaaaatggcagat
cctcagtccattcaagaatctcagaacctttccatgttccttgccaaccacaacaagata
acacaatctttgcagcagcaattggaggtgattgttggctatgaagagctgcttgcagat
attgtgaatttgtgtgtggactactatgaaaacaaaatgtatctaacacccagtgagaaa
catatgcttttgaaagtgatgggctttggattatacctaatggatggaagtgtcagtaac
atctataagttggatgcaaagaaaaggataaatttagccaagatagacaagtactttaag
cagttgcaggttgtcccactgtttggtgacatgcagattgaacttgcaagatacattaag
accagtgcccattatgaggaaaataaatccagatggacatgcacatcttccagcagcagt
ccccagtacaatatatgtgaacagatgatccaaatcagagaagaccatatgcgtttcata
tctgaactggctcgttacagcaacagtgaggtggtgactgggtctggtcgacaggaagct
caaaaaacagatgcagaatatcggaagctctttgatctctctctccaaggcctgcagctt
ctctcccagtggagtgcccatgtcatggaagtgtattcgtggaagctggttcacccaact
gacaaatactctaataaagattgtcctgacaatgcagaagagtatgaaagagcaacaaga
tacaattatactagtgaggagaagtttgctttggttgaggtgattgccatgatcaaaggt
cttcaggtgctgatgggacggatggaaagtgttttcaatcatgccattcgtcatactatt
tatgcagctcttcaggactttgcccaggtcacacttagggagccattaagacaagccatt
aaaaagaagaaaaatgtcattcagagtgttttgcaggccataaggaagacagtgtgtgac
tgggaagcgggtcacgagccattcaatgacccagcactaaggggagagaaggaccccaaa
agtggttttgacatcaaagtcccaagacgtgcagttggaccttccagcactcagctttac
atggtgagaactatgttagagtccctcattgctgacaaaagtggttccaagaaaaccttg
agaagtagccttgaggggcccaccatattggacatagaaaaattccatcgcgagtctttc
ttctacactcatttgataaatttcagtgaaactctgcagcaatgctgtgatctgtcccag
ctgtggttcagggaattcttcttagaactgaccatgggcagaagaatccagtttcccatt
gagatgtccatgccttggattttgacggatcatattttggagacaaaagaggcatcaatg
atggagtatgttctgtattctttggacctttataatgacagtgctcattatgcactgacc
aaatttaagaagcagttcctctatgatgaaattgaggcagaggtaaacctgtgttttgac
caatttgtctacaagctggcagaccaaatatttgcatactacaaggcaatggctggcagc
ctgcttctggataaacggctgcgctcggagtgcaagaaccagggagcaaccattcagctg
ctgcagtccaaccgctatgagacactgctcaaacagagacatgttcaacttctcggtagg
tccatagacctgaaccgactgatcacgcagcgcatttcggcagccatgtacaggtcgatg
gaactggccattggccgctttgaaagcgaggatttgacttctattgtggagctggatggc
ttgatagaggtaaacaaaatgactcacaagcttctgagtagatacatgaccctggacagc
tttgatgccatgttcagagaagccaatcacaatgtttcagccccttatggcagaatcact
cttcatgtcttttgggaactcaattacgatttccttccaaactactgctacaatggatcc
actaacagatttgttcggaccgtgctaccattttctcaggagtttcagcgcgataagcag
cctaatgcacagccacagtatctctatggatcaaaggcattgaatttggcatattccagc
atttacagcaactacaggaattttgtcggtccccctcactttaaagtcatctgtagactt
cttgggtatcagggcattgctgtggtgatggaggagttgctgaaagttgtcaagagcctg
ttacaagggaccattcttcagtatgtcaagaccctaatggaagtgatgcctaagatctgt
aggttaccaagacatgagtatggttctccaggtatcttggagttttttcaccatcagttg
aaggacattgttgaatatgcagaactgaagactgtctgcttccagaatttacgggaagtg
ggaaatgctgtcctgttttgcctcctcattgaacagagtctgtctctagaggaggtgtgt
gacctgttgcacgcagcgccattccaaaacatcctgcccagggttcacgtcaaagagggt
gaaagacttgatgctaaaatgaagagactggaatcaaaatatgcttcactacatttggtt
cctctcattgaaagacttggcacaccccagcaaatagcaatcgcgagggaaggggacttg
ctgaccaaagaacgcctctgctgcggcctgtccatgtttgaggtcatcctgacgaggata
cgctccttcctggacgatcccatctggcgcggacccctgcccagcaacggggtgatgcac
gtggatgagtgtgtggaattccatcgcctctggagcgcaatgcagtttgtctactgcatc
cccgtgggaacacacgagttcactgtggagcagtgctttggggacggcttgcactgggct
ggctgcatgatcatcgtgcttttgggacagcagcggcgctttgatgtcttggatttctgc
taccacctgttgaaagtccaaaagcacgatggcaaagatgaggttatcaagaatgtgcct
ttgaagaaaatggttgagagaattcgcaagttccagattctgaatgatgaaataattgct
attttggacaagtatttgaagtctggcgatggagagagcacacccgtggaacacgtgcgc
tgcttccagccaccaattcatcagtctcttgccagcaactag
DBGET
integrated database retrieval system
