Aphelocoma coerulescens (scrub jay): 138106187
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Entry
138106187 CDS
T10543
Name
(RefSeq) sodium channel protein type 5 subunit alpha-like
KO
K04842
voltage-gated sodium channel type X alpha
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
Ion channels [BR:
acoe04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
138106187
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GFIT
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NCBI-GeneID:
138106187
NCBI-ProteinID:
XP_068862436
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Position
2:5146153..5179979
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AA seq
1991 aa
AA seq
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MAEFLLPGTNNFRRFTQESLAEIKKRIATKKNCRRNTIEQKTEEKARPQLDLKAFQKLPA
LYGNLPSELIGEPLEDLDPYYKDHKVFIVLNKQKTIYRFTATRALWIFSPFHPIRRRAIK
ILVHSLFTWFIMCTILTNCVFMALTESSSSSWNTYVEFTFTGIYTFESLIKILARGFCLN
EFTFLRDPWNWLDFTVIVMAYVGAFSRLGSVSVLRTFRVLRALKTISVVPGLKIIVGALI
QSVKKLADVMILTVFCLSVFALIGLQLFKGNLRQKCIRNTTEFCNKTWESYEEFANDSDY
FARKNGTVDILLCGHGAGVCPPGYKCCKIGPNPDYGFTSFDTFGWAFLSLFRLMTQDYWE
RLYQQTLRASGKVYIVFFMMVIFLGSFYLVNLILAVVTMAYEDQNKATIAETEAKERKFR
EAMELLQKGQESLGIKGIDILSLSSFEASSLSTKEVKERNNRKKRNKSLGIEDNEEEEVF
PKSQLPESQRKLSLLGLVYGPNATQRRLSHGSVFNFQIPAVEVGSRADFGDEETHGAGGH
KTRCQSLSGTQMGRRSSLQSQRGHSSHPATPNCARSGKGASVDEHLGVGLGVGGGSSRVH
SQDPVSSEGVMLPPVMEDSGKRDLPAVHDESSMMHLPPHLSVEYFNEALQRQRAASVVSI
ITSVLEEHEEAQRKCPPRLKNFALKYLIWDCCPLWLRIKEKVAAFIKDPFFDLTITLCIV
MNTLFMALEHNNMSHTFKFMLKIGNLVFTGIFTAEMILKIIALDPYYYFQQPWNIFDSVI
VTLSLIELSFPKHKSKKERRKGGTLSVLRSFRLLRVFKLAKSWPTLNTLIKIICNSLGAL
SNLTLVLAIIIFIFAVVGMQLFGKNYVLNCTKINKDCKPRWHMKDFFHSFLVIFRILCGE
WIETMWDCMVVAEPSLCLVVFLLVMVIGNLVVLNLFIALLLSSFSTDSLQTTEDDGEMNN
LRIAFARIRKGFHFVKSVTWDACCRKLRQIKKVHRKKIRLTAQNSLSCTETKSCKENYNN
EWIEKNRDKCPGLEDFVSNPNIFVCVPIAEAENTSEGFEDDDKLSSFTDTEHSKQDENHL
RQRGDRVKNSGSWSKGSGFSSEEFSVLYLGKDKKGELSSPEEKESDSVSSSEVSTVDLTN
PEDVLKQIPEFSEDFKTPEQCFPEGCVRYFHCCLGSAVKFGGETWWNLRKTCYQIVEHSW
FESFIVFMILLSSGALAFEDIHIHKRERIRAILGFLDKMFTFIFVLEMLLKWVAYGFKKY
FTNAWCWLDFLIVDVSLVNLFGSTFGPMKSLRTLRALRPLRALSRFEGMRVVVNALLGAI
PSIMNVLLVCLIFWLIFSIMGVNLFAGKFGKCVNMTDENSELNSSIDNKTDCGMYNNTGK
IFWVNVKVNFDNVGSGYLALLQVATFKGWTDIMYAAVDSREVDDQPKMENSLYMYLYFVN
FIIFGSFFTLNLFVGVIIDNFNQQKKKISGEDIFMTEEQKKYYNAMKKLGSKKPQKPIPR
PLNRYQGFLFDIATSQIFDVVIMGLICLNMITMMVETYEQSETKTNVLSKINILFVTIFT
AECVLKLLALRQYYFSNAWNIFDLVVVIISLVALLLSSIGKAFEHLLPPTLFRVIRLVRI
GRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMANFAYVKMEGGIDD
MFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNVKDTIGECGKPAIGIIYFV
SYIIISFLIVVNMYIAVILENFNVATEESTEPLGEDDFDIFYEIWEKFDPEATQFITVSV
LSDFADALSKPLRVPKPNKVELTAMDLPVVSGDKIHCLDILFAFTKRVLGDSGELDSLKV
QMEEKFMAANPSKQSYEPISTTLRHRQEEASATVIQRAYRCHLLLRSLKQASYLYQHRTC
STDTLGEAAPENEGLIASMLCANYGRSANKSETSSSVSIPPSYDSVTRESSGNLMVENGE
ITGNQQSPGVK
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcttgctacctggtaccaacaacttccgtaggttcactcaggaatccttg
gcagagatcaaaaagagaattgccaccaaaaagaattgtcgaagaaataccatagagcag
aaaactgaggagaaagcacgtcctcagcttgatctaaaagctttccagaagttgccagct
ctctatggaaaccttccttcagagctcattggggaaccactggaggatctcgacccatac
tacaaagatcataaggttttcatagtgctaaacaagcagaaaacaatctacagatttact
gctacacgtgccctgtggatcttcagtccctttcatccaatacgaagaagagcaattaaa
attttagtacattcattattcacctggtttatcatgtgcaccatattaactaattgtgta
ttcatggctctgactgagtcgtcgtcgtcttcatggaacacatatgttgaatttactttc
actggaatttacacttttgaatcattgataaaaatattggcaagaggattctgtctaaat
gaattcactttccttcgggatccctggaactggttggatttcaccgttatcgtcatggcg
tatgtgggagcgtttagccgcttggggagtgtgtcagtccttcggactttcagggttctg
agagctttaaaaaccatttcagtagtcccaggactcaagatcattgtaggggcacttatc
cagtctgttaagaaactcgctgatgtgatgatcctgaccgttttctgcttgagtgtcttt
gccctcataggcctccagctttttaagggcaatctcagacaaaagtgcatcaggaacact
acagagttttgtaataaaacatgggaaagttatgaagagtttgctaatgattcagattat
tttgctaggaaaaatggtactgtggatattttgctgtgtggtcatggtgctggggtctgt
cctcctggctataaatgctgtaaaattgggccaaatcctgattatggtttcaccagtttt
gatacatttggctgggcttttctttccttattccgcctgatgacccaggactactgggag
cgtctgtaccaacagaccctcagagcttctgggaaggtgtatatagtcttcttcatgatg
gtcatctttctgggctcattttatctagtcaacttgattctggctgtagtaacaatggca
tatgaggaccagaacaaggccaccattgctgaaaccgaggcaaaggaaaggaaatttcgg
gaagccatggaattattgcagaaggggcaagagtcattgggcattaaagggattgatatc
ctgtcacttagctcctttgaagcctcttctctgtctaccaaagaagtcaaagaaaggaac
aataggaaaaagagaaataagtcattggggatagaagataatgaagaagaagaagtattc
cccaagtcacagctcccagagagtcaacgaaagttgtctctcctcggcctggtgtacggc
cccaacgccacccagcgcaggctgagccacggcagcgtgttcaacttccaaatccccgcc
gtggaggtgggttccagggcggatttcggtgatgaggagacccacggcgctgggggacac
aaaacccggtgccagtccctgtcgggaacgcagatgggaagacgctccagcctgcaaagc
caaaggggccacagctcccaccccgcgaccccgaactgcgcgcggagcggcaagggcgcc
agcgtggatgagcacctcggggtgggtttgggggtgggaggagggagcagcagggtgcac
agccaagatccagtgtcctctgaaggagtcatgcttccaccagtcatggaagactcggga
aagagggatctgccagctgtgcatgatgagagcagcatgatgcatttacctcctcatctg
tcagtggagtactttaatgaggctcttcagagacaaagggcagcaagtgtcgtcagcata
attaccagtgtcttggaggaacacgaagaagctcagaggaaatgcccaccacgcctgaag
aactttgctttaaagtatctaatttgggactgttgtccactttggttgagaatcaaggaa
aaagtggctgctttcataaaggatcctttttttgatctcactatcaccctctgcattgtg
atgaacactttgttcatggcactggagcacaataacatgtcacatacttttaaattcatg
cttaaaataggcaacttggttttcacaggaatcttcactgcagaaatgatcttaaaaatc
attgctctagatccctattattattttcagcagccctggaatatttttgacagtgtcatt
gtcacactgagtttaattgaactgagtttccccaaacacaaaagcaagaaagaaaggcga
aaaggaggaactctgtcagttttacgatccttcagactgctgagggtcttcaaactggca
aagtcctggccaactttaaacactctaattaaaataatttgtaactccctgggagcactg
agtaatctgaccctcgtcctggcaatcatcattttcatttttgctgtagtagggatgcaa
ctttttgggaaaaattatgtgctcaactgcactaaaataaacaaagactgcaagccacgc
tggcacatgaaggactttttccattcattcctcgtcattttccgaattctgtgtggagaa
tggattgagaccatgtgggactgcatggtggttgctgaaccatcactgtgtcttgttgtc
tttctgctggtcatggtgataggaaatttagtggttctcaaccttttcattgcattgctg
ctgagttcttttagtactgacagtctccagacaacagaggatgatggagaaatgaacaat
cttcggattgccttcgctcggatccgcaagggattccactttgtcaagagcgtgacgtgg
gatgcctgttgtaggaagctcaggcagataaagaaagtacacaggaagaaaatcagattg
actgcacagaactcactttcttgcacagaaacaaagagttgtaaagagaattacaataat
gaatggattgagaaaaacagggacaaatgcccaggtcttgaagactttgttagcaacccc
aatatatttgtttgtgtccctattgctgaggcagagaatacaagtgagggttttgaagat
gacgataaactgagctcatttacagacacagaacacagcaaacaggatgaaaatcacctg
aggcaaagaggagacagagtaaaaaattcaggcagctggagtaaaggatcgggattttcc
tctgaagaattcagtgtgctttatctaggaaaggacaagaagggtgaactgtcatcacca
gaagaaaaagagtcggacagtgtcagctcttctgaagtcagcacagtggatctgacaaat
cctgaagatgttttaaagcagattccagaattttctgaagacttcaagactccagaacaa
tgttttccagaaggttgtgttcggtactttcattgttgcctgggtagtgctgtaaagttt
ggaggagaaacctggtggaatctgagaaaaacctgctaccagattgttgaacactcttgg
tttgaatcctttatcgtattcatgattcttctgagcagtggagccctggcatttgaagac
atccatattcataagagagaaagaattcgagcgatattgggatttcttgacaaaatgttc
actttcatctttgttctggagatgctcctgaagtgggtggcttatggcttcaagaagtat
tttaccaatgcctggtgctggctggacttccttattgtagatgtctcattggtaaatctc
tttggcagtacctttggccccatgaaatctcttaggactctgcgagctctgagacccttg
agagcattgtcacggtttgagggaatgagggttgtggtcaatgccctcctgggagccatc
ccttcaatcatgaatgttctgcttgtctgcctcatcttctggctcatcttcagcatcatg
ggagtgaacctcttcgctgggaagtttgggaaatgtgtcaatatgacagatgaaaattct
gaattaaatagctcgatcgacaacaaaacagactgtgggatgtataacaacactggaaaa
atattctgggtcaacgttaaagtcaattttgataatgttggctctggctacctggctctt
cttcaggtggcaacatttaagggttggacggacatcatgtatgcagcagtagattcacga
gaggtcgatgatcagccaaagatggagaacagtctgtatatgtatctctactttgtgaac
ttcatcatctttggatcttttttcaccctgaacctctttgtcggtgtaatcattgacaac
ttcaaccaacaaaagaaaaagataagtggggaagatatctttatgacagaagaacagaaa
aaatactacaatgcaatgaaaaagttgggatccaagaaacctcaaaaacctattccaaga
ccactgaacagatatcaaggcttccttttcgacattgcaacatcccaaatctttgatgtt
gtcatcatgggtctcatctgcctcaacatgatcacgatgatggtggaaacctatgagcaa
agtgaaacgaagacaaacgtcctcagcaaaatcaatatactctttgttactatctttact
gcagaatgtgtgctgaaattgctggctctgaggcagtactatttctcaaatgcctggaac
atatttgatttagttgttgttattatatcacttgttgccttactgctttccagcattggc
aaagcctttgaacatctcttaccacccacactcttcagggtcattcgcttggtccggatt
gggcgaatactgagactcatccggggagccaaaggaattagaactctgctttttgcctta
atgatgtccctacctgctctgttcaacattggcctcttgctgtttctggtcatgttcatt
tatgccatttttggcatggctaactttgcctatgtgaagatggaaggtggcattgacgat
atgttcaacttccaaacctttgctaacagcatgctctgtctcttccaaatcaccacatca
gctggctgggatggtcttctcagtcctattttaaacactgggccaccctattgtgatcca
aatgtaaaagataccataggtgaatgtggtaaacctgccataggtattatttattttgta
agttacatcatcatatcatttctcattgttgtaaacatgtatatagctgttattctagag
aacttcaatgtggccactgaggaaagtacagagcctttaggggaagatgactttgacatc
ttttatgaaatctgggagaaatttgatcccgaggcaacccagtttataacagtctctgta
ctttcagactttgcagatgctctgtctaagcctttgcgtgtaccaaaaccaaacaaagtt
gaactcacagcaatggacctgcctgtggtcagtggggacaagatacactgcttggatatc
ttgtttgctttcaccaagagggtgctgggagattctggggagctggattctctgaaagta
caaatggaggagaaattcatggctgccaacccatcaaaacaatcctacgagccaatatcg
actacgctcagacacaggcaagaggaagcatcagccacagtgatccagcgtgcctacagg
tgccacctgctcctgcgctccctcaaacaggcttcctacctgtaccagcacagaacttgc
agcactgacactctgggggaggctgctccagaaaatgaaggacttattgcatctatgctg
tgtgcaaattacggtaggagtgctaacaagtctgaaacttcgtcctcagtgtccatccct
ccgtcgtacgacagcgtcacaagggagagtagtggcaatctcatggttgagaatggagaa
ataacaggcaatcaacaatctccaggcgttaagtag
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integrated database retrieval system
