Aphelocoma coerulescens (scrub jay): 138106318
Help
Entry
138106318 CDS
T10543
Name
(RefSeq) cohesin subunit SA-2-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
138106318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoe03036
]
138106318
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
138106318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
138106318
NCBI-ProteinID:
XP_068862846
LinkDB
All DBs
Position
1:34280932..34346057
Genome browser
AA seq
1218 aa
AA seq
DB search
MIAEPNAASNLPSQKENAVHDETVPESAAQNGNCVRNGNLKTPREKRKVREQCENIRRNS
TGNRRVSQLQNGQVVEAVTLFEVVSMGKQAMQSVVVDWIEAYKQDRNVALLDLINFFIQC
SGCQGMVTAEMFQSLHKKDVMRKMTETFDKETGLQYKKFMAYPWILTVTWPVDMDNEDYP
LIRSGPYWKKFKANFCEFIAVLVQQCQCSILYDNYLMDTIISLLTGLADSMVRAFRHTST
LAAMKLLTAVVGIHLNLDVNKHNAQRLYEVEKQRISGKRTSYRLDQLERKRKEYEHKLLE
IQNMMNAIFKGTFLNRYRDVIPEIRATCIEEISSWIKTYPDAFLNDSYLKYVGWMLYDKQ
AEVRLKCLLGLQGIYSRKELVSRMDLFTNRFKDRIVSMPLDKDHEVAVQAMKLLMLMSQN
CEDVLSAEDCEMLHQFVYTTHRPLAVAAGEFLYKRLLSHEGDKEVQPKGGGKFGASTDQL
KRLIHFFLESELHKHVAYLIDSLWDWAGKFLKDWECMTTLLLKNAEEDGEALSDAQESAL
IEIILATVREAAEGHPPVGRGAAKKILSVKEKKIQLEDCTKITEHFIMVLPQLLAKYSTD
AQKVANLLQIPQYYDLDVYSTGHLEKHLDALLREIKDIVAKHSDMSVLEASSRTYYILCS
EEIAIYSQVDCARTQMIDELMDQLNQLLDCFWQKEGGFCTDAGEISRMHSTLRRIAAFHN
AHDLTKWNLYDKTLRFLVFETEHGSLPVLIILPALQCTYFSLLWQLAAVSENSPKETLFP
LRRELRRFSQICTCFLQHKEKDVREKAFMILCDWLLILSHLDSNNNQEAVGLLGYLPNTP
LQEKLLSFIREHVFMDEEDEKKDLTEEEKDESCKLDDLHKKRSLLAAYCKLIVYNVVEMT
AAAEIYKYYVKTYSDFGDIIKETLSKTRHNNKIQSAKTLILCLQQLFQTHAENQDSSSGV
DFSSASFTNIKELARRFSLTFGWDQVKSRESIAMIHKEGIEFAFQGATGVDGKCLPPNLS
FLVIISEFSNKLLKPDKRLVYSYLQRYMTEPLPCRGDEWQPLVWYRNSLLANEDEESSVF
GSLGEWPPMSSSKTSFKRKLSNGSLPETSQTEAASKALEQQGASQLPSAAGKSRKRLKSQ
EMRLQEHLPFLCPGGLRRRYCKDEIKTEDVSEEGPAEDTIEDVDIVGTDQVILAGFPALR
TAVVEVGECQVRASWVAV
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgatagccgagcccaacgcagccagtaaccttcccagccaaaaagagaatgctgtccat
gatgagactgtgccagagtctgctgcgcagaatggcaactgtgtgagaaatggcaacctg
aaaacaccaagagagaagcggaaggtccgagagcagtgtgaaaacataaggaggaattct
actggtaacagaagagtgagccagctgcagaatggccaagtggttgaggcagttaccttg
tttgaagtggttagcatggggaagcaggccatgcagtctgtagtagttgactggattgaa
gcttacaaacaagacaggaatgtggcacttctggatctcatcaacttcttcattcagtgc
tcaggctgtcaaggcatggtaactgcagagatgtttcaaagtttgcacaagaaggatgtc
atgcgaaaaatgacagagacctttgataaggaaactggattgcagtacaagaaattcatg
gcctatccttggatcctgacagttacttggccggtggacatggacaatgaagactaccca
ctcatccgatcaggaccctattggaagaagttcaaggccaatttctgtgaattcattgca
gtgcttgtccagcagtgccagtgcagcatcctgtatgataactacttgatggacaccatc
atctcgctgcttacaggcttagcagattccatggtcagagcattcaggcacacaagcact
ttggcagcaatgaaacttctgacagcagttgtaggcatccatctgaaccttgatgtcaac
aaacacaatgctcaaagattgtatgaggtggagaagcagaggataagcggcaagaggacc
agttacagacttgatcagctagagagaaaaaggaaagagtatgagcataagcttctagag
atacagaacatgatgaatgctattttcaaagggacatttctaaaccgttaccgtgatgtt
atccctgaaatcagagcaacttgcattgaagaaattagcagctggattaaaacataccca
gatgcttttttgaatgacagctacttaaaatatgttgggtggatgctgtatgataagcaa
gctgaagtacggttgaagtgtcttctgggactgcagggaatttatagcagaaaagaactt
gtttccaggatggatctctttactaacagattcaaggatcgaattgtgtccatgcctctg
gacaaggaccatgaagtagcagttcaagccatgaaactcttgatgcttatgtcacagaac
tgtgaggatgtgttatcagctgaagactgtgaaatgttgcaccagtttgtttataccaca
caccgtccgcttgcagtagcagctggggaattcctttataaaaggctgcttagtcatgag
ggagataaagaagttcagcccaaaggaggaggaaagtttggggcgagtactgaccaattg
aaaagattaatacactttttcctggagagtgagctacacaaacatgttgcatacctaata
gacagcttgtgggattgggcaggcaaattcctgaaagactgggagtgcatgaccactctt
ctactaaaaaatgctgaagaagatggagaagcactgagcgatgcccaggaaagtgctctc
atcgaaatcatcctcgcaacagtcagagaagcagctgaaggtcatcctccagtgggcaga
ggtgcagccaaaaaaattttgtcagtgaaagagaagaaaatacaattggaagattgtacc
aaaattactgaacactttattatggtgcttcctcagctcttggcaaagtattcaacagat
gcacaaaaagtggcaaatcttctgcagattcctcagtattatgatttagatgtttacagt
acaggacatctagagaagcatttggatgctttgctgagagagattaaagacattgtggcc
aaacactccgacatgtctgtcctcgaggcttcttccaggacttattatatcctctgcagt
gaagaaattgccatctatagccaggtggattgtgctcgaactcaaatgatagatgaatta
atggatcagcttaaccagctactagattgcttctggcaaaaggaaggaggattttgtacg
gatgcaggagaaatatcccggatgcattctactttgagaagaatagcagcttttcataat
gcccatgatctcaccaagtggaatctgtatgacaagactttaaggttcctggtgtttgaa
acggaacatggcagtttgcctgttctgattatcctgccagctctccagtgcacatatttt
tctctcctatggcaactagctgccgtttcggaaaattctcccaaggagactctttttcca
ctaagaagggagctgagacgtttcagtcagatttgtacatgcttcctccagcataaggaa
aaagatgtaagagaaaaggccttcatgatactctgtgactggttgctgattttgagtcac
ctggattcaaataataatcaagaagcagttgggcttctaggttatcttcctaacacacca
cttcaggaaaaactgctttcatttatccgggaacatgttttcatggatgaagaagatgaa
aaaaaagatctgacagaagaggaaaaggatgaaagttgcaaacttgatgacttgcacaaa
aagcggagtcttcttgcagcatattgcaagttaatagtgtataatgtggtagagatgact
gcagcagctgagatctataagtattatgtgaagacctacagtgattttggagacataatt
aaagaaacattaagcaagacgaggcacaataacaaaattcagagtgccaagacactgatt
ctctgtctgcagcagctgtttcagacacatgcagaaaaccaagacagcagtagtggtgtg
gacttctcctctgcttcctttacaaacatcaaagaacttgctcgtcgcttttcactaaca
tttggttgggaccaagtgaaatctagagaatctatagccatgatacacaaggaagggatt
gaatttgcttttcaaggagctactggagtagatggaaaatgcttgcctcctaacttgagc
tttctggtaatcatcagtgaattttccaacaagctgctaaagccagacaaaaggctagtg
tacagttacttacagaggtacatgacagagccactgccctgcagaggagacgaatggcag
cccttggtctggtacagaaactctttattggcaaatgaagatgaggagagctctgtcttc
ggcagtttgggagagtggccccccatgagctcatctaagacatcttttaaaaggaaattg
tctaatggctctttgcctgaaaccagccagactgaagcagcaagcaaagccctggaacag
cagggtgcttcccagcttccctctgcagcagggaaaagcagaaagaggctgaaatctcaa
gagatgcgcttgcaggagcatttgccattcctttgtccaggagggctgcgcaggagatac
tgcaaagatgagattaagacagaagatgtctccgaggagggtccagcagaagacacaatt
gaagatgttgacattgttggtacagaccaggtaattctggctggttttccagctctgagg
acagctgtagttgaggtgggtgaatgtcaggtcagagcctcctgggtagccgtgtag
DBGET
integrated database retrieval system
