Aphelocoma coerulescens (scrub jay): 138106324
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Entry
138106324 CDS
T10543
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138106324 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acoe02000
]
138106324 (ABCB1)
04147 Exosome [BR:
acoe04147
]
138106324 (ABCB1)
04090 CD molecules [BR:
acoe04090
]
138106324 (ABCB1)
Enzymes [BR:
acoe01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
138106324 (ABCB1)
Transporters [BR:
acoe02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
138106324 (ABCB1)
Exosome [BR:
acoe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
138106324 (ABCB1)
CD molecules [BR:
acoe04090
]
Proteins
138106324 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Rad17
RsgA_GTPase
AAA_5
Zeta_toxin
AAA_15
AAA_28
AAA_29
G-alpha
AAA_30
AAA_19
nSTAND1
DUF87
DUF2057
Motif
Other DBs
NCBI-GeneID:
138106324
NCBI-ProteinID:
XP_068862854
LinkDB
All DBs
Position
2:complement(21761874..21809290)
Genome browser
AA seq
1285 aa
AA seq
DB search
MPSEDEKKYTADGNSHEIAASSQDHEFEDKHQGKKKQKKGEKPKMVSPLTLFRYSSWSDK
LLMILGTLLAVAHGSSLPFAMIIFGDMTDSFVTSGDTNFTGNISMNFTHDMLEKLEEDMT
RYAYYYSGIAAGVLLAAYVQTSFWTLAAGRQIKKIREKFFHAIMRQEIGWFDVNDVGELN
TRLIDDVSKINEGIGDKIGLLVQSLTTFVVGFIVGLIRGWKLTLVILAVSPVLGLSAALW
AKVLSAFTDKEQAAYAKAGAVAEEVLAAIRTVIAFGGQEKEIKRYHKNLEDAKRIGIRKA
ITANISMGAAFLLIYASYALAFWYGTTLILTDDYTIGKVLTVFFSVLIGAFSIGQTAPSI
EAFASARGAAYTIFNIIDNEPQIDSYSETGYKPDHIKGNLEFKNVYFNYPSRPDVEILKG
LNLKINSGQTVALVGGSGCGKSTTVQLIQRFYDPKEGTVTIDGHDIKTLNIRYLREVIGV
VNQEPVLFATTIAENIRYGREDVTMEEIEKATKEANAYDFIMKLPNKFETVVGERGAQLS
GGQKQRIAIARALVRNPKILLLDEATSALDTESESVVQAALDKAREGRTTVVVAHRLSTV
RNADLIAVFNGGVITEQGNHAKLLERKGIYHKLVNMQAIEAEVPLSEDDENAHSAKNSGS
EPEFEESLTTGLRRRSTRRSMKKPGEQNNGPDEEETSPAEELRPASFLKIMKLNKTEWPY
FVAGTLCAIINGGLQPAFAIIFSEIIGIFSETDKDILREKSNLYSLLFLVLGIVSFFTFF
FQGFTFGKAGEILTMRLRFMAFKAMLRQDMGWFDNPKNSTGALTTRLANDASQVKGATGV
RLALIAQNVANLGTGIIISLVYGWQLTLLLLAVVPIIAVAGMIEMKMLAGHAKKDKQELE
AAGKIATEAIENIRTVVSLTRERKFESMYGEHLIVPYRNSVKKAHIFGFCFALSQAMMFF
TYAGCFRFGAYLVVNKYMEYKTVFLVFSAVVFGAMALGQTSSFAPDYAKAKISAAHLFLL
FERVPSIDSYSEEGDKPETFEGNITIKDVAFNYPNRPEVKILQGLNLKVEKGQTLALVGS
SGCGKSTVVQLLERFYDPLDGEMLFDGKNAKALNIQWLRAQIGIVSQEPILFDFTIAENI
AYGDNSRQVSFEEIVSAAKEANIHSFIDSLPNKYNTRVGDKGTQLSGGQKQRIAIARALV
RKPQILLLDEATSALDTESEKIVQEALDKAREGRTCIVIAHRLSTIQNADKIAVVQNGKV
VEQGTHQQLLAEKGIYYSLVNVQSG
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgaagatgaaaagaagtatactgcagatggaaacagtcatgagatcgctgca
tccagccaggatcatgaatttgaagacaaacaccagggaaagaagaagcagaagaaaggg
gaaaaacctaagatggtcagcccattaacactgtttcgatactccagctggtcagataaa
ttattaatgatactaggcactctgctggcggtagcccatggaagcagtctcccttttgcg
atgataatttttggtgatatgactgatagctttgttacttctggagacacaaattttaca
ggaaacatttcaatgaatttcactcatgatatgcttgaaaagctggaagaagatatgaca
agatatgcatactactattctggaatagcagctggtgttcttcttgctgcttacgtgcaa
acttcgttttggaccttagcagcaggtcggcaaataaaaaaaattagagaaaaatttttt
catgcaattatgagacaggaaattggatggtttgatgtaaatgatgtgggagaacttaac
actcgtcttatagatgatgtctccaagattaatgaaggaataggtgacaagattggattg
cttgttcaatcactaacaacatttgtggtaggatttattgttggtctcataagaggatgg
aaattaacccttgtaatacttgcagttagtcctgtcctgggactttcagcagccctctgg
gcaaaggttctctctgctttcactgacaaagaacaagctgcatatgcaaaagcaggtgct
gttgcagaagaagttctggcagcaatccgtactgtaatagcttttggaggacaggaaaaa
gaaattaaaagataccataaaaatttagaagatgctaaacggattggaataagaaaggct
attacagctaatatttctatgggtgctgctttcttactgatatatgcatcatatgcactg
gcattctggtatggaactactttgatcttaactgatgattacactattggcaaagttctt
acagtctttttctctgtattgattggagctttcagcattggacagactgctccaagcata
gaggcatttgctagtgcaagaggagctgcctatacaatctttaatataatagacaatgaa
cctcaaattgacagctattcagagacaggttacaaaccagaccacataaaagggaacttg
gaattcaaaaatgtttacttcaattatccatccagaccagatgttgagattctgaagggc
ttgaatctcaagattaattctggccagacagtggccctggttggtggcagtggctgcggg
aaaagtacaactgttcagctcatccagagattttatgatcccaaggaaggcacggttaca
attgatgggcacgatattaagaccttaaacataaggtatctgcgggaggttattggtgtg
gtgaatcaggagcccgtgctctttgccactactattgcagaaaatattcgttatggccgt
gaggatgtcaccatggaagagattgaaaaagccaccaaggaagcgaatgcttatgacttc
atcatgaagctacccaacaagtttgaaactgtggttggagaaagaggagcacagctgagt
ggaggccagaagcaaagaatagcaattgcccgagctctggttcgcaatcccaaaattctt
ctgcttgatgaggcaacatcagctttggatactgagagtgaatcagttgtgcaggcagca
ctggacaaggcaagggaaggacgcactacagttgtggtagctcatcgactgtcaacagtc
cgcaatgcagatctgatagctgtgttcaatggtggagttatcacagagcaagggaatcat
gctaaattgcttgagagaaagggaatctaccacaaacttgttaacatgcaggcaatagaa
gctgaagttccactatcagaagatgatgagaatgcacatagtgccaaaaacagtggatct
gaaccagaatttgaagaatccttaacaacaggtttgagaaggcgatcaactcggagaagc
atgaaaaagccaggagagcaaaataatggtcctgatgaggaagaaacttcacctgctgaa
gaactacgtccagcttcatttctgaaaattatgaagttgaacaaaactgaatggccatac
tttgtagctggaaccttgtgtgcaattatcaatggaggtttacaacctgcatttgcaatc
atattttccgaaattatagggattttttcagaaactgacaaggacatcttaagagaaaag
agcaacttatattcactgctatttttagtacttggaattgtttccttttttacttttttt
ttccagggtttcacatttggcaaagctggagaaattcttacaatgaggcttcgattcatg
gcatttaaagcaatgcttagacaggatatgggctggtttgataatcctaaaaatagcact
ggagcattaaccacaagacttgctaatgatgcctctcaagtgaaaggagcaactggtgtc
agactagcattaattgcccaaaacgtagccaacctggggactggaattattatatcatta
gtttatggctggcagctgaccctgctacttttagctgttgtgcccatcattgcggtggca
ggaatgattgaaatgaaaatgttggctgggcatgctaagaaagataaacaagagctggaa
gctgcaggaaagattgccacagaagcaatagaaaatattagaactgttgttagcttgacc
cgagaaagaaaatttgagtcgatgtatggagaacatttgattgtaccatacagaaattct
gtgaagaaggcacatatatttggcttttgttttgccctttcacaagcaatgatgttcttt
acctatgccggctgtttccggtttggtgcctatctagtggtaaacaaatacatggagtat
aaaactgtatttttagtgttttcagctgttgtatttggtgcaatggcattaggacaaacc
agttcttttgctccagactatgccaaagccaagatatcagcagcccacttgtttctgctg
tttgaaagagtgccctcaatagatagttacagtgaggaaggagacaagcctgaaacgttt
gagggaaacataacaatcaaagatgtggcatttaactacccaaaccgaccagaggtcaaa
atccttcaaggtttgaatctgaaagtagaaaagggacaaaccctggctcttgttggtagc
agtggctgtggaaagagcacagttgttcagctgcttgagagattttatgacccacttgat
ggagaaatgctttttgatggtaaaaatgcaaaggcactgaatatccagtggttgagagct
cagattggtatagtgtcacaagaaccaatcctgttcgacttcactattgctgaaaatatt
gcctatggagataacagtcggcaggtgtcctttgaggaaattgttagtgcagcaaaagaa
gccaatattcattccttcattgactcactgccaaataaatacaacacccgtgtgggagac
aagggaacccagctttctggtggccagaaacaacgtattgctattgcccgagctcttgta
cgtaagccccaaattctgctactggatgaagctacttctgccttagacacagagagtgaa
aagattgtccaggaagctctggataaagctcgagaaggtcgtacgtgcatcgtgatagct
caccgcctctccaccatccaaaatgctgacaagattgcagtggtccagaatggcaaggtc
gtagagcagggcacccatcagcagcttctggctgaaaaaggcatctactattccctggtc
aatgttcaaagtgggtaa
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integrated database retrieval system
