Aphelocoma coerulescens (scrub jay): 138106355
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Entry
138106355 CDS
T10543
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138106355 (VPS50)
Membrane trafficking [BR:
acoe04131
]
Protein recycling
Others
EARP complex
138106355 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
138106355
NCBI-ProteinID:
XP_068862935
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All DBs
Position
2:24173262..24259371
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AA seq
967 aa
AA seq
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MQKIKSLMTRQGLRSPQESVNDLSPIESFRIPTKEELRELHEEPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVEELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAAVVSSV
SDGNNVIGTEENSFDRNYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSSFKYDDFIFVLD
IISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISSTVTLFEQYCNGGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPIKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTFESTGLGLSSSRLRTTLNRIQESLIDLEVSADPSGTLTAAEERKEKVPSPHLSHLVVL
TSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELR
KPVYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNVYVDALLKEFEEFNRRLNDVSKRV
RIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMECWIKEHREYSTKQLTNLVNICLGTYINKKARQKLLATID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccgccagggtctaagaagtcctcaggagagcgtt
aatgacctcagtcctattgaaagctttcggattcctactaaggaggagctcagagaactg
catgaagaaccaactgatcctcaggcacaacaggaaataattaacagcattgaagaagtt
tatttttccaatgactccttcgatattgtgaagtatgagttagagaggcttcctccagta
cttagtcttcaagaactggaagagtacagagacaaactaaaacaacagcaagctgctgta
tctaagaaagttgcagatttaatccttgaaaaacagcctgcatatgttgaggaacttgaa
cgtgttacatcattgcagactggccttcagttagcagcggttatttgcacaaatggaaga
agacacctgaatatagcaaaggaaggcttcacacaaactagtttggggctacttgcaaat
caaaggaaacgacagctgcttattggactgctaaagtctctgagaacaataaaaacactg
caaagaactgatgtgcgtttgagtgagatgttggaggaagaggattatccaggagctatt
cagctgtgcttggaatgccagaaagctgccagcactttcaaacactacagttgtataagt
gaattaaattcaaaactgcaggacaccttggagcaaatagaggaacaattggatgtagcg
ctttccaaaatatgcaagaattttgatatcaatcattatacaaaggttcagcaggcttac
aggctgcttggaaaaacacagacagcaatggaccagttacatatgcacttcactcaagcc
attcacaacaccgtgtttcaagtagtccttggatatgtggagctgtgtgcaggaaacaca
gacaccaagtttcagaagttacagtacaaagacctctgtacacatattacatcagacagc
tacatcccatgccttgctgatctctgcaaagccctctgggaagtcatgctcagttactac
cgaacgatgcagtggcatgagaaccatgaccaagatgaggcagcagttgtgtcttctgtt
tcagatggcaacaatgtcattggaactgaagagaacagttttgaccgcaactatgtaaaa
aagaaattggaacatgggctttcacgaatatggcaggatgttcaattgaaagtgaaaacg
tatcttctgggaacagatctgtctagcttcaaatatgacgacttcatatttgtacttgat
attatcagcaggctgatgcaggttggagaagaattttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacaaagcgttaattatttcaaaacataccacagaacccgtctt
gaagaactaagaatgttcttggagaatgagacctgggaactttgtcctgttaaatcaagc
tttagtattttgcagcttcatgagtttaagttcatggagcagtcacggtccccatccgtg
tcaccgagtaagcaacccgcctcagcgatttcatcaacggtaacgttgttcgagcagtac
tgtaacggaggaaacccctttgaaattcaggccgacagcaaagatgatgagacagaagac
gtgttagcttccaatgggtatgaatcagatgagcaagaaaaaagtgcatatcaggagtat
gatagcgacagtgatgttcctgaagagttgaaaagagattatgtggatgagcagacagga
gatgccccgataaaaagtgtttctcgagaaactctgaggagcagaaagagatcagattat
aacctcaataaagtgaatgcacctattctaacaaacactacactgaatgtaataaggctt
gttgggaaatacatgcagatgatgaatattctgaaaccgattgcatttgatgtgatccac
ttcatgtcccagctctttgattactatctgtatgcagtctatacattttttggccgaaat
gacacgtttgaatcaacgggactgggcctcagtagcagcagattacgcaccacactgaac
agaatccaggagagtctgattgatctggaggtgtctgctgatccttcaggaactctcaca
gccgctgaagagagaaaagagaaggtgccaagcccacatctcagtcacctcgtagttttg
acatctggcaattcgctatatggtttggcagagagagtggtggccacagaatccttggta
tttctggctgagcagtttgaatttcttcagcctcatcttgatgcagtgatgccagctgcc
aagaagccttttcttcagcagttctattctcagacagtgtcaactgccagtgaactacgt
aaaccagtttattggattgttgctgctaaagccattgactatgaacaaatgctgcttctc
atggctaatgtgaaatgggatgtgaaggaaatcatgtcacagcacaatgtatatgtagat
gctcttttaaaggaatttgaagaatttaacaggaggttgaatgatgtgtctaagagagtc
cgtattccattgccagtctccaacatcctttgggagcactgcatacgcttggccaataga
actcttgtggaaggttatgctaatgtaaagaagtgcagcaatgaaggacgtgccttgatg
caactggattttcaacagttcttaatgaaactagaaaagttaacagacattaggcctatt
ccagataaggaatttgtggagacctacattaaagcatactacctgacagaaaatgacatg
gaatgctggataaaagaacatagggaatattccactaagcagttgaccaatctggtgaat
atttgtctgggcacctacatcaacaagaaggcgagacagaagctgttagctaccattgat
gacatagacaggcctaagagataa
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