Aphelocoma coerulescens (scrub jay): 138106457
Help
Entry
138106457 CDS
T10543
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
acoe04990
]
138106457 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
acoe04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
138106457 (SNX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Syntaxin_2
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
138106457
NCBI-ProteinID:
XP_068863173
LinkDB
All DBs
Position
2:complement(38832336..38898671)
Genome browser
AA seq
968 aa
AA seq
DB search
MLTETSLSIWGWGSLGLVLFLVTFGPFAIFYFAFYILCFVGGGFVVTLLFGKSNSEKYLE
QCEHSFLPCTSVGISKCIEEMKREARPIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWY
YTLSDDESFLLEIRQALQYALVQFSARSKETDWQPYFTTRLVDDFGTHLRVFRKAQQRIA
EKGDQMKDQAEELVDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYILLPPGD
FQNKIMRYFVREILSRGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDNI
GELEAVKDKASEELQYLRSLDTAGDDINTIKNQINSLLYVIKVCDSRIQRLQSGKEIDTV
KLAANFGKLCTVPLDHILVDNVALQFFMDYMQQIGGQAHLFFWMTVEGYRVTAQQQLEVL
QSRQKDGKHQTNQTKGLLRAAAFGVYEQYLSEKASPRVNIDDNLVAKLAETLNHEDPTPE
IFDDIQRKVYELMLRDERFYPSFKQNVLYVRMLAELDMLKDPSFRGSDDGEGESFNGSPT
GSINLSLDDLSNVPSDETVQLHAYISDTVYADSDPYAVAGVCNDHGKTYALYAITVHRRN
ANSEEMWKTYRRYSDFHDFHMRITEQFENLANILKLPGKKTFNNMDREFLEKRKKDLNAY
LQLLLNPEVMKASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKS
IPDSLAEGMTKMSDNMGKMSERLGQDIKQSFFKVPPLMQKTYSDPDHCRVAAPIDDNVDD
NIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQ
VADAVKRFRDAFWPNGILAETVPRRDKAIRMRTRVAGKTKLLEVMPDELKHIIGAETTRK
GILRVFEMFQHSQLNKRMVYVFLERFLETLFPQNKFPELFNKLHSRSKQMQRYKQRLHST
QAPSLQKR
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgttaacagagaccagtctttccatatggggatggggaagtcttggccttgtgcttttt
ctagtaacttttggacccttcgctatattttactttgcattttatatcctctgctttgtg
ggtgggggttttgtggttactcttttatttggaaaaagcaattcagaaaaataccttgag
cagtgtgaacattcatttctcccttgtacatcagttgggatctctaagtgcatagaagaa
atgaaacgtgaagccagacctattaagattgacagaagactgacaggtgcgaacataatt
gatgagcctttgcaacaggtaatccagttttccctgagagactatgtgcagtattggtat
tacacactaagtgatgacgagtcctttcttctggaaattaggcaggctcttcagtatgca
cttgttcagttttctgccaggtcaaaggaaacagactggcagccttatttcactacgcga
cttgttgatgactttggcactcatcttcgagttttcagaaaagctcagcaaaggatagca
gagaaaggtgatcagatgaaagatcaagctgaggaacttgtagatacattctttgaggtt
gaagttgaaatggaaaaagaagtctgtcgtgatctagtctgcacttctcccaaagatgaa
gaaggattcctaagggatctgtgtgaggttttactgtatatattgctacctcctggagac
ttccagaacaagatcatgcgatactttgtcagggaaatcctctcccgaggaattcttctt
ccattaataaaccagctcagtgatcctgattatattaatcagtatgtcatatggatgatt
cgtgattccaactgtaactatgaggcctttatgaatattattaaattaagtgataatata
ggagaattggaagcagtgaaagataaagcaagtgaagagctgcagtatcttcgctctcta
gatacagcaggagatgatatcaacactataaaaaatcaaataaacagtttattatatgtt
attaaagtatgtgattcaagaattcagaggttgcagtcaggaaaagaaatagatactgtg
aaactggcagcaaactttggaaaactttgcacagtccctctggaccatattctggtagac
aatgttgcactacagttttttatggattacatgcagcagattggtggccaagcacatctg
tttttctggatgacagtggaaggatacagggttacagcacagcaacagctggaggtactt
caaagccggcagaaagatggaaaacatcagactaatcagaccaagggtctattaagagca
gctgcatttggagtttatgagcaatatttatcagaaaaggcatctccaagagttaatatt
gatgacaacttagtagcaaaacttgcagaaacactgaaccatgaggatccaacacctgaa
atctttgatgacattcagagaaaggtgtatgagttgatgctgcgagatgagaggttctac
ccttcgttcaagcagaatgtgttgtatgtgcgtatgttagctgagctggatatgctgaag
gatcccagtttcagaggatcagatgatggtgaaggagaatcttttaatgggtctcctact
ggcagcataaatctgtccttagatgacctttcaaatgtcccttctgatgagacagttcag
ctccatgcatacatctcagatactgtctatgctgactctgacccatatgctgtggcagga
gtgtgtaatgaccacggcaagacatacgccctgtacgccatcaccgtccaccgacgaaat
gcgaacagcgaggagatgtggaagacatatcggcgctacagtgacttccatgactttcac
atgaggatcactgagcagtttgaaaaccttgcgaatatactaaaacttcctggcaaaaaa
acatttaacaatatggacagagagtttttggaaaagaggaaaaaagatttaaatgcttat
ttgcagctcttgttaaatcctgaagtgatgaaagcttctccagctttagcccattatgtg
tatgacttcctggagaataaagcctacagcaaagggaagggggattttgcacggaagatg
gacacatttgtaaatccactgcgtaactctatgagaaatgtatcaaatgcagtcaagtct
atccctgacagcctggcagagggaatgactaaaatgtcagacaacatgggtaaaatgtca
gagagattgggacaagacataaagcaatcatttttcaaggtgccacctctgatgcagaaa
acctattcagatccagaccattgccgtgttgcagcaccaattgatgacaacgtggatgac
aatattcccctgagagtaatgctcctacttatggatgaagtcttcgatttaaaggagaga
aatcagtggttaagaagaaatataaaaaatctgcttcagcaacttattagagcaacatat
ggcgacacaattaatagaaaaatagttgatcatgttgattggatgacatctcccgagcaa
gtagcagatgcagtgaaacgcttcagagatgctttttggcccaatggcattttagcagag
actgttccacgaagggacaaagctattagaatgagaacaagagtggcagggaagaccaaa
ttactggaggtgatgccagatgaactgaagcacatcataggcgctgagactacacggaaa
ggcattcttcgggtttttgaaatgttccagcatagtcagctgaataagagaatggtgtat
gtgtttctggagagattcctagaaaccttatttccacaaaataagtttcctgagctcttc
aacaaactgcattcaaggtcaaagcaaatgcagagatataagcagagactacactctact
caagcgccttccttacagaaaaggtga
DBGET
integrated database retrieval system
