KEGG   Aphelocoma coerulescens (scrub jay): 138106459
Entry
138106459         CDS       T10543                                 
Symbol
POLR1F
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA43
  KO
K03004  DNA-directed RNA polymerase I subunit RPA43
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    138106459 (POLR1F)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acoe03021]
    138106459 (POLR1F)
Transcription machinery [BR:acoe03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     138106459 (POLR1F)
SSDB
Motif
Pfam: RPA43_OB SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 138106459
NCBI-ProteinID: XP_068863182
LinkDB
Position
2:complement(39648324..39651990)
AA seq 332 aa
MAVPREPPPAPALPPAPAAPSPAAAAAAAAPSFAAARALVARRYSCLVAAPHRRHVALPP
RFLGRKRSGIRAQLDAELLRYSESLQGVPVAYDNIKVVGELGDIYDDQGFIHLNIEADFI
IFSPKKGKKLVGVINKVAPSHIGCLIHGCFNASIPKPEQMSIVQWQELGLKIGDELKFQV
LHLDSDAAGVFFIRGGLTKSSMKPKKSDTVTESTNGDKIQKLGHQENGLNNCGEDTVTEE
PLNETDNLGRENEEEPSVDAVNGLCDDKNKKKKKKKKDKQEEQELVLPASDSSGYQSDHK
KSKKKKRKHCDEVEENELSQMSEKPKAKKKRD
NT seq 999 nt   +upstreamnt  +downstreamnt
atggccgtgccgcgggagccgccgcccgccccggcgctgccgcccgcccccgccgccccc
tcccccgccgccgccgccgccgccgccgccccgtcgttcgccgcggcccgcgcgctcgtg
gcgcgccgctactcgtgcctggtggcggcgccgcaccggcggcacgtggcgctgccgccg
cgcttcctgggccgcaagcgctccggcatccgcgcgcagctggacgccgagctcctgcgc
tactcggagagcctgcagggtgtgccggtggcttacgacaacatcaaagtggtgggggag
ctcggcgacatctacgacgaccaaggattcatccacctgaacatcgaggcggacttcatc
atcttcagccccaagaaagggaagaagctggtgggtgtaattaataaagtggcccctagt
catattggctgcctgatacatggatgcttcaatgcatctatccctaagcctgaacaaatg
tccattgtacagtggcaagagctggggttaaaaataggggatgaactgaaatttcaagtg
ttgcacttggattctgatgcagctggggtgttcttcattcgaggaggactcactaaaagc
agcatgaaacccaaaaaatctgacacagtcactgaaagtacaaatggggacaaaattcaa
aagcttggccaccaggaaaacggcttgaataactgtggggaagatactgtcacagaagag
cctttaaatgagacagataaccttgggagggaaaatgaagaagagccaagtgttgatgct
gtgaatggattatgtgatgataaaaacaagaagaaaaagaaaaagaaaaaggacaagcaa
gaagaacaggaactcgtattgcctgccagtgactccagtggttaccaaagtgaccataaa
aagtcaaagaaaaagaaaagaaagcactgtgatgaagttgaggaaaatgagttgtctcag
atgtcagaaaaacccaaagcaaaaaagaaaagggactaa

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