KEGG   Aphelocoma coerulescens (scrub jay): 138106604
Entry
138106604         CDS       T10543                                 
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
  KO
K10728  topoisomerase (DNA) II binding protein 1
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe03440  Homologous recombination
Brite
DNA replication proteins [BR:acoe03032]
 Eukaryotic type
  DNA Replication Initiation Factors
   Other initiation factors
    138106604 (TOPBP1)
DNA repair and recombination proteins [BR:acoe03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     138106604 (TOPBP1)
SSDB
Other DBs
NCBI-GeneID: 138106604
NCBI-ProteinID: XP_068863574
LinkDB
Position
2:complement(53135296..53160242)
AA seq 1517 aa
MRSSKEPFFVKFIKSSGSSEYFSKALESIKEFQSEEHLQILEEETVLNIKENDKSLYICD
PFQGVGFSHLKKLGCRIVGPQVVLYCMQSQQCVPRAEYPVYNMTMADVTVSCTSLEKDVR
EEVHKYVQMMGGCVYRDLNMSVTHLIAGEVGSKKYLVAASLKKPVLLPSWVKTLWDKSQQ
RIMRYTDVNMEDYACPVFLGCTICVTGLSSSDRKEVQRLTAEHGGQYTGQLKMNECTHLI
VQEPKGQKYECAKKWNVHCVSVQWFSDSIKKGFCQDETMYKVEAGSKLHNAPSTSTPTND
TSKPHNHTLSDVSHISSINLSGVNETACNSAMSSRLDPLPDELENLDISSFQAPEDLLDG
CRIYLCGFSGRKLDKMRRLINCGGGVRFNQLNEDVTHVILGENNDELKHFLDKTAHRPHI
VTAKWLLESFGKGCLCPVEHYIPLNYQLLENPILEQPGMKSIFPKKTSHLKKDAVNMVKH
QRAAEDDFLSQYVNNYPTLDEVEKLTSRTFSDVTNLTAQGENQPSVCNGSLAESSALAEG
GLFFRKRFLLLGFGEEDESCIADIIKDNAGEVLPLQSRTIADYAVVPLLGCTVKATVGDV
VTNTWLITCVEQQVLLDIRSNPLFTPVLVMEGATPLEDCVLSFSQFIGAERDSLVYLAGV
LGARVQEFFVRKASAKKGMFASTHLVVREPNGSKYEAAKKWNLPAVTVAWLLQSARTGKR
ADESKFLVENAEAEESCITQLSKTPATVKSPDSEQPTHLLEAGKKGAVTPLDINRFQSKA
FQAVISHHTGKTTPVAQGGPLQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALEALETPRG
PEQKTRKLSTPLSEVIGRNLKLALASSTAQAAALTASPQLAAAQPEVEEEPKPLADAVIY
VSKKLSKRQRELNAVAASLGADYRWCFDETVTHFIYKGGQNDNNKEYKSVKERGIHIVSE
HWLLESAREYKRLPESLFPHTYNPKMSLDISAVQDTRLSSSSKPLSAGKPAEENEIIPVD
EDDADDDVTTDQIKEMVTIGEEQVVASESKGVLTQALEMREDFQRQLQELMSATSLVKPQ
GQRGSLSRSSFDGSPATPDSTRSVRNGRSRVLEALRQSRQALADINTEPSQSEQIIWDDP
TAREERARLVSNLQWPNSPSQYLEQGQSNTNKNMDESALKGSVPDAEMTGIAVREAGDGD
VIEGLKNPICRSPETPIKDNLIPTPQAPSIAFPLANPPVAPEPKEKVVTEDKKADEETEK
LRKFQLSSLNPQERFDYCHLIEELGGIVLEKQYFDPDCTHIVVGHPLRNEKFLASMAAGK
WVLHRSYLEACRGAGCFVQEEDYEWGSNSVLNVLSGINVNQKKLALAAMRWRKRIQKGSQ
ETGIVEGAFSGWKVILNVDQTKEAGFRRLLQSGGAKVFSGHSVSLFKEATHLFADFSKLK
PDDSRVNVAEAAAQGVNCLKPEYIADYLIQDPPPPTESYRLPEAESYLQNNSDLGSGLSQ
KRKAGGEMSRVKRSRIH
NT seq 4554 nt   +upstreamnt  +downstreamnt
atgagaagtagtaaggagccgttttttgtgaagttcataaagtcttccgggagctcggaa
tatttttctaaagcccttgagtctataaaagaattccagtcagaagaacatcttcagatc
cttgaagaagaaacagtactcaatataaaagaaaatgataaatcactttacatttgtgat
cctttccaaggcgtgggtttcagtcacctcaaaaagcttggctgtaggattgttggacca
caggtagtcctgtactgcatgcagtcgcagcagtgtgtcccgagagctgagtatcctgtg
tacaacatgaccatggccgacgtcacggtgtcctgtaccagcctggagaaggatgtgagg
gaagaagttcacaagtatgtgcaaatgatgggtggatgtgtatacagagacctcaacatg
tcagtgactcatctgatagctggagaagttggaagcaagaaatacttggtagctgcttcc
ctgaagaaacctgttttgcttccctcttgggttaagacattgtgggataagtctcagcaa
cgcataatgaggtacactgatgttaacatggaggactacgcttgtcctgtgttcctcggc
tgcacaatctgtgtaactggcttaagcagctctgacaggaaagaagtccagcgcctcact
gctgagcatggtgggcagtacacggggcagctcaagatgaatgaatgcactcacctcata
gttcaagagccaaaaggtcagaagtatgaatgtgccaaaaagtggaatgtgcactgtgtg
tctgtgcagtggttttctgacagcatcaagaaaggcttctgtcaggatgagacaatgtat
aaagtagaggctggatcaaaactgcataatgcacccagtacatcaacacctacaaatgac
accagcaagcctcataatcataccctttcggatgtcagccacatttccagtatcaattta
agcggtgttaatgaaactgcatgtaattcagctatgagcagcagactggatcctcttcct
gatgagctggaaaacttggacataagttcttttcaagcccctgaagatttgttagatggg
tgtcgaatctatctctgtggcttcagtggcaggaagttggacaagatgagaaggcttatt
aattgcggtggtggtgttcgatttaatcaacttaatgaagatgttactcatgtcattctg
ggggaaaataatgatgagctgaaacactttttggacaaaacggctcacaggcctcatata
gtgacagcaaaatggttgctggagtcatttggtaaaggttgtctctgtccagtggagcac
tatatccctctaaactaccagctgttagagaatccaattttggaacaacctggaatgaag
tcaatttttccaaaaaaaaccagtcacttgaagaaagatgctgtgaacatggtaaagcac
cagagagctgctgaagatgacttcctctctcaatatgtaaataactatcctacactagat
gaagttgaaaaactaacatccagaaccttcagtgatgttactaacttgactgctcaagga
gagaatcagccttctgtctgtaatgggtctttggcagagtcttctgcactggctgaagga
ggcttatttttcagaaagagatttcttcttctgggttttggtgaagaggacgagtcctgc
attgcggatattataaaggacaatgctggggaagttctgccactgcaaagcagaaccatt
gcagactatgctgtggtacctttattagggtgcacagtgaaggcaactgttggtgacgtt
gtcacaaatacatggctgataacatgcgtggaacagcaagtccttctagacatccgatcc
aatcctctcttcacaccagtcctggtaatggaaggagctactcctctggaagattgtgtt
ctttcttttagccagttcatcggtgccgagagagactcccttgtttatctggcaggagtg
ctgggagccagagtccaggaattctttgtgcggaaagccagtgcgaaaaaaggaatgttt
gccagcacccatcttgtggtgagagaaccgaacggctccaagtatgaagctgcaaagaag
tggaatttgccagcagtcactgtagcttggcttttgcagtctgcaaggacaggaaagaga
gcagatgaaagcaagttcttggttgaaaatgcagaggctgaagagagttgcattacccag
cttagcaaaacaccagcaactgttaaatctcctgattcagaacagcctactcatctcctt
gaagctggaaaaaaaggagctgtgaccccccttgatatcaacaggttccagagtaaagct
ttccaagctgtaatctctcatcatactgggaagacaacccctgttgcacaagggggacca
ctccagaaagagccgtctttacatcttgacacaccatcaaagtttctttccaaagacaag
ttgttcaagccttcttttgatgtaaaggatgctctggaagctttggaaactcctagaggt
cctgaacaaaaaaccaggaaactgagtacacctctctctgaagtcatcggcagaaacttg
aaactggcactggcaagcagcacagcgcaggcagcagctcttactgccagccctcagttg
gctgctgcacagccagaagtggaagaagagcccaagcctctagctgatgctgttatatat
gttagtaaaaaacttagtaagaggcaaagggagctgaatgcagtagcagcttctcttgga
gcagactacagatggtgctttgatgaaacagtaacacacttcatctataaaggaggacag
aatgataacaataaagagtacaaatctgttaaagaacggggtatacatattgtttcagaa
cactggcttttagagagtgcccgagaatataaacggcttcctgaatctctctttcctcac
acttacaatcccaaaatgagcttggacatcagtgcagtgcaagacaccaggctctcctcc
tccagtaaacctctttcagctggaaaaccagccgaggaaaatgagattattccagtggat
gaagatgatgctgatgatgatgtaactactgaccaaataaaggaaatggtcactataggg
gaagaacaagttgtagcaagcgaatccaaaggagttttaacccaagcactagaaatgagg
gaggacttccaaaggcagctgcaggagctcatgtctgccacatcactagtgaaaccacaa
gggcaaagaggatccctttccaggagcagctttgatggctctccagccactcctgatagc
acacggtctgtgcgaaatggccgcagcagggtcttggaagctctaaggcaatcccgccag
gcactggcagatataaacacagagccatcccagagtgagcagatcatttgggatgatcct
actgcaagggaagagagagcaagacttgtcagcaaccttcagtggcctaatagtccttct
cagtaccttgagcaaggtcagagtaacaccaataagaacatggatgagtctgccctcaaa
ggatctgtaccggatgcagagatgactggtatagctgttcgtgaggctggggatggagat
gtgattgaaggtctaaagaatcccatatgtagatcccctgaaacaccaattaaagataac
ttgatccccactccacaggcccccagcattgctttccccctggctaaccctcctgtggca
ccagagcccaaagaaaaggttgttacagaagataagaaggctgatgaagaaacagaaaaa
ctccgtaaatttcagctgtcttctcttaatcctcaagaaagatttgattactgccacctg
attgaggaattaggtggaatagtacttgagaaacagtactttgatccggattgcacacac
attgttgtgggacatcctcttcggaatgaaaaattcttggcctcgatggcagctggaaag
tgggtgcttcatcgttcctacctggaggcatgtagaggagctggctgctttgttcaggaa
gaagactatgagtggggaagtaactctgtacttaatgttttgtctggaatcaatgtaaac
cagaagaaactagcactggcagccatgaggtggaggaaaagaattcaaaaagggagtcaa
gaaactggtattgttgagggagctttcagtggttggaaagtaatcctgaatgttgatcaa
accaaggaagcgggattcaggcgccttcttcagtcaggaggagcaaaagtgttttctggc
cattctgtgtctctctttaaagaagcaactcacctctttgctgacttcagtaagctgaag
ccagacgactccagggttaacgtggcagaggcggcagcccagggagtgaactgcctcaaa
ccggagtacatcgctgactacctcatccaggatccacctccccctacggagtcttaccgc
ctgccggaagccgaatcttaccttcagaataactcagatctcggaagtggattatcccag
aaaagaaaagcagggggagaaatgagcagagtcaagcgatccagaatacactaa

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