Aphelocoma coerulescens (scrub jay): 138106675
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Entry
138106675 CDS
T10543
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03250
Viral life cycle - HIV-1
acoe03272
Virion - Hepatitis viruses
acoe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
138106675 (PDCD6IP)
03272 Virion - Hepatitis viruses
138106675 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138106675 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138106675 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acoe04147
]
138106675 (PDCD6IP)
Membrane trafficking [BR:
acoe04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
138106675 (PDCD6IP)
Exosome [BR:
acoe04147
]
Exosomal proteins
Proteins found in most exosomes
138106675 (PDCD6IP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
T2SSM
Motif
Other DBs
NCBI-GeneID:
138106675
NCBI-ProteinID:
XP_068863800
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Position
2:complement(58336946..58367374)
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AA seq
879 aa
AA seq
DB search
MTNFISVQLKKASEVDLAKPLCKFIQQSYPGAEAQAEHCRAAEELSRLRKSALGRPLDKH
ESALETLLRYYDQLCSIEPKFPFSENQVCVTFTWKDAFDKGSLFGGSAKLALASLGYEKT
CVLFNCGALASQIAAEQNLDNDEGLKAAAKHYQFASGAFQHIKDTVLSALNREPTVDISP
DTVGTLSLIMLAQAQEVFFLKATRDKMKDGIIAKLANQAADYYGDAYKQCQYKDTLPKYF
YFQEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIGRLQHAADLVKTVASRYDEYIN
VKDLVDKINRALAAAKKDNDFIYHDRVPDLKDLESIGKASLVKSTPVVVPLSQKFTDLFE
KMVPLQVQQSVSVYNQRKADLVNRSIAQMREATNLANGVLASLNLPAAIEDVSGDTVPQS
ILNKSKSVIEQGGIQTVDQLIKDLPELLQRNKEILDESLRLLDEEETTDNDLRTKFKERW
QRTPSNELYKPLRAEGANYHNILSKAMQADGQVKERYQTHRDTIALLCKPEAELNAAIPS
ANPAKTLQGSEVVNVLRTLLANLDEVKKEREQLENDLKSVNFDMTSKFLTALAQDGAINE
EAISVTELDRIYGSYTQKVQESLKKQEELLKNIQNAHQDFSKMKQSNNESNLREEVLKNL
AVANDNFVELVANLKEGTKFYNELTELLLKFQNKCSDIVFARKTERDELLKDLQQSIARE
PSAPSIPLPTYQTTSAAGSKPAASPTPTPAPRTMVGTKPQPPARPPPPVISAASSSSSAL
APSGTAAAPAAAPAPTPGASAPAAGTAPSQAQGPPYPTYPPYPGYCQMPMPMGYNPYMYG
QYNLPYAPSPVYQNPGQPPYPQPQQPGYPFPQQPYYHQQ
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacttcatctcggtgcagctgaagaaggcctcggaggtggacttggccaagccg
ctgtgcaagttcatccagcaaagctacccgggcgccgaggcgcaggccgagcactgccgc
gccgccgaggagctcagcaggctccgcaagagcgcgctcggccgcccgctcgacaagcat
gagagcgcgctggagaccctcctcagatactatgatcagctgtgttccattgaaccaaag
tttccattctctgaaaatcaggtctgtgtaacatttacgtggaaagatgcttttgataaa
ggatcactttttggaggatctgccaaactggctctggcaagtttgggatatgagaagacc
tgtgttttgttcaactgtggagcattggcaagccagattgcagcagaacagaatctggat
aacgatgaagggctaaaagctgcagctaagcactatcagtttgctagtggtgcttttcaa
cacattaaagacacagttttgtcagccttgaatcgagaacctacagtggacatctctcca
gacacagttgggactctcagtcttattatgctggctcaagcccaagaagtcttttttttg
aaagcaacaagagataaaatgaaagatggtatcatagccaaactagcaaatcaagctgca
gattactatggtgatgcttacaagcagtgccagtataaagatactttgcccaagtatttt
tatttccaggaggtgtttcctgttctggcagcaaagcactgcattatgcaggccaatgca
gaataccatcaatctatcctggcaaaacaacagaagaaatttggtgaagaaattgggagg
ttacagcatgcagcagatttggtcaaaacggtggcatctcgctatgatgaatatataaat
gttaaagatctggttgacaaaatcaaccgtgcacttgcagctgccaaaaaagacaatgac
ttcatttaccatgaccgggttcctgacctgaaagatttggagtccattggaaaagccagt
cttgtgaagtctactcctgttgttgttccactcagtcagaaattcactgacctgtttgag
aagatggttccattgcaagtgcagcaatctgtgagcgtttataaccagaggaaagcggat
ctggtaaacaggtcaatagcccagatgagagaagccacaaatctggcaaatggtgtgttg
gcttccctcaaccttcctgctgctatcgaagatgtgtctggggatactgttcctcagtct
attttgaacaagtctaagtctgtgattgaacaggggggaattcagactgttgatcagctg
attaaagatctgcctgaactgctgcaaaggaacaaagaaattttagatgaatctctgaga
ttactagatgaagaagaaactacagacaatgacctgcgaacaaaattcaaggaacgctgg
cagagaacaccatccaatgaactctataagcctttgagggcagagggagccaattaccat
aatattttgagtaaagctatgcaagcagatgggcaggtgaaagagcgctatcagactcac
cgggatacgattgcacttctgtgtaagccagaggcagaactcaacgcagccattccttct
gccaacccagcaaaaacattacagggaagtgaggttgttaatgtcttaagaactttgctg
gccaatctggatgaagttaagaaggagagagaacaactggaaaatgacctgaaatctgtg
aattttgacatgacaagcaaattcctgactgcacttgcacaggatggtgctataaatgag
gaggctatctctgtgactgagttggacagaatttatggaagttacacacagaaagtgcag
gagtccctaaaaaagcaggaagaacttctcaaaaacattcagaatgcacatcaggatttt
tcaaagatgaaacaatcaaacaacgaatctaatttaagagaagaagtcttgaagaactta
gctgtagcaaatgacaactttgtggaacttgtagccaatttaaaagaaggcacaaagttt
tacaatgagctgacagaactcctgctgaaattccagaacaagtgcagtgacattgtcttt
gctcgcaagactgaaagagatgaactgctcaaggatttgcagcaaagcattgctagggag
cccagtgctccctccattccactgcctacatatcagaccacttcagcagcaggaagtaag
ccagcggcatctccgactcccactccagccccaagaaccatggtggggactaaaccacag
ccaccagcacggccaccacccccagtgatttctgcagcaagcagttcctcttctgcatta
gcaccctctggaacagctgcagcacctgctgctgctccagctcctactccaggagccagt
gcacctgcagcaggcactgcaccttcgcaggctcaaggaccaccttaccccacttatccc
ccttacccagggtattgccagatgccaatgccaatgggctataatccatacatgtatggt
cagtataatctgccatatgcaccctcacctgtgtatcaaaatcctggacaaccaccatat
ccgcaacctcaacaacctggatacccttttcctcaacagccttattaccatcagcaataa
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