Aphelocoma coerulescens (scrub jay): 138106789
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Entry
138106789 CDS
T10543
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 2
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoe03036
]
138106789 (KDM1B)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
138106789 (KDM1B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Thi4
SWIRM
DAO
Pyr_redox
Pyr_redox_2
Pyr_redox_3
FAD_binding_3
HI0933_like
FAD_binding_2
FAD_oxidored
Lycopene_cycl
2-Hacid_dh_C
GIDA
NAD_binding_9
AlaDh_PNT_C
KARI_N
NAD_binding_7
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
138106789
NCBI-ProteinID:
XP_068864112
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All DBs
Position
2:complement(73746537..73774275)
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AA seq
820 aa
AA seq
DB search
MSMGRVRTKKKACSLDQSPDSLPVRSSGRQVKKKAAEAADDDDEASEKKYRKCEKAGCTA
TCPVCFASAAERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYTAWKRIWTSN
GKSEPSPKAFMADQQLPYWVQCTKPECGKWRQLTKEIQLTPQIAKTYRCGMKLNNSTKTE
GSDQCSMPEDLRVAEVSDHWWYSMLILPPLLKDSVAAPFLAAYYPDCVGMSPSCTSTNRL
PGESNLVKLEHLKSVPNVTVAGMNKYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSR
DPTMYLALRNLILALWYTNCKEALTPQKCIHHIIVRGLVRIRCVQEMERILYFMTRKGLI
NTGILSVSPDQYLLPKEYHNKSVIIVGAGSAGLAAARQLHNFGIKVFVLEAKDRIGGRVW
DDKTFTGVTVGRGAQIVNGCVNNPMALMCEQLGIKMHKLGEKCDLIQEGGRITDPTIDKR
MDFHFNAILDVVSEWRKDKTQHQDVPLGEKIQEIYKAFIQESGIQFSELEEKVLQFHLSN
LEYACGSNLSQVSARSWDHNEFFAQFAGDHTLLTVGYSTVIDKLAEGLDIRLNFPVQSID
YSGEEVQVTTADGTVWTTQKVLVTVPLALLQKNAIQFNPPLSEKKIKAINSLGAGVIEKI
ALQFPYRFWDSKIQGADFFGHVPPNSSQRGLFSVFYDMDPEGKESILMSVVTGDAVTTIK
NLDDQQVLQQCMTVLRELFKEQEVPDPVKFFVTRWSNDPWLQMAYSFVKTGGSGEAYDII
AEDIQGKVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgggaagggtacgaacgaaaaaaaaggcatgttctttggatcagtctccagac
agccttcctgtgaggagttctggaagacaggtgaagaagaaagcggctgaagcagcagat
gatgatgatgaagcatcagagaagaaatacagaaagtgtgaaaaagctggatgcactgca
acatgtcctgtttgctttgccagtgcagctgaaagatgtgcgaaaaatgggtatacatct
agatggtatcatctgtcctgtggggaacacttctgcaatgaatgttttgaccactattac
cgaagccataaagatggttatgataaatatactgcctggaaaaggatttggacaagtaat
ggtaaaagtgagcccagtccaaaagcctttatggctgatcaacagcttccttactgggtg
cagtgtacaaagccagaatgtggtaaatggcgtcagctgacaaaggaaatccagctgaca
ccacaaatagcaaaaacctacagatgtggtatgaaactgaacaattccaccaagactgag
ggctcagaccagtgttccatgcctgaggacttgagagtggctgaagtttcagaccattgg
tggtactccatgctcatactccctcctttgctgaaagacagtgtggcagctccctttcta
gctgcgtattatccagactgcgtgggcatgagtccatcctgtaccagcactaatcggtta
cctggtgaatccaaccttgtgaagttagagcacttaaagagtgttcctaatgtgactgtt
gcaggcatgaacaagtattttcagcctttttaccagcccaatgaatgtgggaaagcactt
tgtgtgaggccagatgtcatggaactcgatgagctctatgagttcccagaatattcacga
gaccctaccatgtacctggcgttgagaaacttgattttggctttgtggtacacaaactgc
aaggaggctcttacccctcaaaaatgtatccatcatatcattgttcgggggctcgtgcgg
attcgctgtgtacaggaaatggagaggatcctgtattttatgacaaggaaagggctaatt
aatacagggattttgtcagtcagtcctgaccagtaccttcttcctaaggaataccacaat
aaatctgtcattattgttggggctggttcagcaggattagcagcagcccgacaactgcac
aactttggaattaaggtctttgtcttagaagctaaagacagaattggtggccgagtgtgg
gatgataagacattcacaggtgtcactgttggaagaggtgcacaaatcgtcaatggatgt
gtcaacaacccaatggcactaatgtgtgagcaacttggcataaaaatgcacaaactaggg
gagaaatgtgacttgatccaggaaggtggaaggataacagatcccactattgataaacgt
atggactttcatttcaatgccatcctagatgtcgtctctgagtggagaaaagataaaacc
caacatcaagatgttcctcttggtgaaaaaatacaagagatctataaagcctttattcag
gagtctggtatccagttcagtgagctggaagaaaaagtactacagttccatctcagtaat
ttggaatatgcctgtggcagcaatctctctcaggtatctgcacgctcatgggaccacaac
gaattttttgcccagtttgctggagatcacactcttctaactgtgggatattccactgtg
attgataagttggcagaagggctggacatccggctgaatttcccagtacagagtattgac
tattctggtgaagaagtgcaggtcactactgcagatggaacagtgtggacaacacaaaag
gtattagtgactgtaccactggcccttcttcagaaaaatgccattcagtttaatcctcca
ctgtcagaaaaaaaaattaaagccattaatagtttgggagcaggagtcattgagaaaatt
gccttgcagtttccatatagattttgggacagtaaaattcaaggggctgatttttttggt
cacgttccacccaattccagccaacgtgggctctttagtgtcttctatgacatggatcca
gagggcaaagaaagcattttaatgtcagtggtcactggagatgctgtgacaaccattaag
aatttagatgatcagcaagtactgcaacagtgtatgactgtactccgagagctgtttaag
gagcaggaggttcctgacccagtgaagttttttgttactcgatggagcaacgacccttgg
ctgcagatggcgtacagttttgtgaaaactgggggcagcggtgaagcttacgacatcata
gctgaagacatacaaggaaaagttttttttgctggtgaggccacaaataggcactttccc
cagaccgttacaggagcttacttgagtggggttcgagaagcaagcaagatagcagcattt
taa
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