Aphelocoma coerulescens (scrub jay): 138106808
Help
Entry
138106808 CDS
T10543
Symbol
LCMT2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acoe03016
]
138106808 (LCMT2)
Enzymes [BR:
acoe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
138106808 (LCMT2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
138106808 (LCMT2)
Transfer RNA biogenesis [BR:
acoe03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
138106808 (LCMT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_5
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_2
Kelch_1
Glyoxal_oxid_N
Kelch_3
Motif
Other DBs
NCBI-GeneID:
138106808
NCBI-ProteinID:
XP_068864492
LinkDB
All DBs
Position
1:complement(198462..223532)
Genome browser
AA seq
684 aa
AA seq
DB search
MLVGSGSAVSLSRQVQGTGGSSAVSKCSAAARGYIQDRFLRLLAGRRRRRAPLIHRGYYI
RARAVDHCVQDFLLKTQSLPRTQILSLGAGFDSLYFRLKDMGLLRHTVVYEVDFPNVACQ
KATLIKRMKELSALVGDTGGEGLGAITFSGEDYKLLGVDLSELSELERTLEEAGLNNETP
TLFIAEVVLTYMENTRSDALIQWAAEHFPQACFLVYEQVHPEDPFGSVMQQHFSQLNCAL
RSLARYPDCEAQQRRFLGKGWTDCSVMDMNEFFTCCIPEDEQQRVQTLEPFDEYEEWHLK
CSHYFVLAASKGMEPSWTPLLPSVTVPLHAGPVGMAGSVPAAVCARLSGSPGLRRYGHHS
VLIKPGVILTTGGFGEENGQHCRMRNFHVLSKLEGYWKAVCVTQNIPDKRWGERLYHTVS
CLSDTLALVVGGRTSPSSTGLGMLWLKFPKTCNASDPDDVSVEPVSLQPAAEAAASRWRH
STTEMTFKGEQYLFVYGGRSALEPVLGDWYFLHTPELSYTAIAVEGPVPESRHSHSACSW
EGGVLIAGGLGAAEQPLGSVFLLRELEHGFQWQTIETHPPLVPRYSHTAHVHEGKLLLVG
GVWFHASSVPGITVIDLMTGLCLDYVINVGHLEWPLMLHNHSSVFLPNEKELLVIGGGGN
CFSFGTHLNPEPVALRLSSILISH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgttggtcggaagcggcagcgccgtgtcattgtcccggcaggtccagggcaccggcggc
agcagcgccgtcagcaagtgctcggcggcagcgcggggctacatccaggaccggttcctg
cggcttctggcggggcggcggcggcggcgagcgccgcttatccaccggggttattacatc
cgtgcccgtgctgtagatcactgtgttcaggacttcctgctgaagacacaaagcctaccc
aggacacagatcctatctttaggtgctggttttgattccttatacttccgtttgaaggat
atgggtcttctgcgtcacactgtggtatatgaggtagacttcccaaatgtggcatgccaa
aaagccactctgatcaaaagaatgaaagagttgtcagcactggtgggagacactggaggg
gaaggattaggagccattaccttttctggagaggattataaattactgggagtggattta
tcagagctgtctgagctggagagaaccctggaggaagcgggtctgaacaatgaaaccccc
accctcttcatcgcagaggtggtgctcacctacatggagaacaccaggtcagatgccttg
attcagtgggcagcagagcatttccctcaggcatgcttcctggtgtacgagcaggtgcac
ccagaggacccttttggatctgtcatgcagcagcatttcagccagctgaactgtgcactg
cgctcactggcacggtaccctgactgtgaggcacagcagaggcgctttctgggaaagggc
tggactgactgcagtgtcatggatatgaatgagtttttcacctgttgtattccagaagat
gagcagcaaagagtgcagactctggagccttttgatgagtatgaggaatggcatctgaaa
tgttctcattactttgtgttggctgcatcaaaggggatggaaccttcctggactccgttg
ttacccagtgtgacagttcctcttcatgctggtcctgttgggatggctgggagtgtccct
gcagcagtatgtgcaaggctctcaggaagtcctggcctgagacgttacggtcaccactcc
gttcttataaaacccggcgtgattcttaccacaggaggctttggggaggagaatggacaa
cactgccgcatgagaaatttccatgtgctgagtaagcttgaaggctactggaaagctgtc
tgtgtgacacagaatattcctgataaaagatggggtgagaggttgtaccatactgtgtct
tgtctctcagacactctggccctggtcgtaggaggacgaacatccccatcgagcacaggc
ttgggaatgttgtggctaaagttccccaaaacttgtaatgcttcagacccagatgacgtt
tcagtggagcctgtaagtctgcagcctgctgctgaagcagcagcttcacgttggagacac
agcacaactgaaatgacatttaaaggtgagcagtacctgtttgtgtatggtggccgctct
gctctggagcctgtgctcggggattggtatttcctgcacactccagaactctcctacact
gcgattgctgttgagggtccagtcccagaaagccgccactctcacagtgcctgcagctgg
gaaggaggagtgctgatcgcaggaggtctgggagcagctgagcagcccttgggttcagtt
ttccttctgagggagcttgaacatggctttcagtggcagacaatagagacacaccctcct
cttgtcccaaggtattcacatactgcacatgtgcatgaaggaaagcttctgctcgtcggt
ggagtatggtttcatgcatcctctgtgccaggcatcactgtcattgacttaatgactggt
ctctgcttggactatgtgattaatgtggggcatctggagtggccattaatgctacataat
catagcagtgtctttctgccaaatgagaaggagttgttggttattggtggtggtggaaac
tgcttctcctttgggacacacttgaacccagagcctgtcgcgctgaggctaagcagcatc
ctgatcagtcactga
DBGET
integrated database retrieval system
