Aphelocoma coerulescens (scrub jay): 138106817
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Entry
138106817 CDS
T10543
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03013
Nucleocytoplasmic transport
acoe03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138106817 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
138106817 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoe03019
]
138106817 (NUP153)
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138106817 (NUP153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
138106817
NCBI-ProteinID:
XP_068864167
LinkDB
All DBs
Position
2:complement(75528173..75571900)
Genome browser
AA seq
1453 aa
AA seq
DB search
MASGGSGGGGGGKIRTRRHHLGAAKPPYARGKQQLGLISRVTESVKNIVPGWLQKYFNKR
EDKCVDTNESANEEENPVNYHHNYANEDALVIDGRITPESARINLEEPSTSRSALNFSDV
LTRPSLHRSHLNCTVLDSTVPHCQPSTSSSLGIGSPGLSLVKEIKDSTSQHDDDNISTTS
GFSSRASDKDITVSKNTSAPLLWSPEAERSHSLSQHPASSSKKPAFNLSAFGSPSPSLGN
TSVFKTRQLGDSPFYPGKTSYGGAAAAARQTKVQISAYQPPIKRQMKAKQANVQSYGVTS
STARRILQTLEKMSSPLADAKRIPSSVSSPLSSPVDRTVLNVTSFQSRQNQMDSQHPPVQ
KLVTPKPISLTGSRITYFKPSLKSATSSRKIHQRADTDHQDMIEESFPAEQPVKSSESNL
SYPKPNTPASNGLSSGGRMDSACGKMRRERERYCASRPGQKQQLEMEQELPEVPLPISNA
SLPTFNFSFPASSAVSSSPSTVSKAVVNKVQPASNVGSPTFVFSSPIVKSTEVEVLPPLS
QIKFTFSVPVVKSSELSGSTDTPVTSILSPGSATVNSTSNKKEEEEEYDGFCKPAKFLKQ
GSVLDILKSPGFMSGKSPSCSSAQPVTSTVVYTRPAISSFSAGKDTSKQASSFWQSDTHD
PCLQNKTTDGKCVTCEAAKVSTVESTKQTISVSQCVSSKTTVPTAVTLGFEDKFKPAPNT
WDCDTCLVQNKPEATKCVACETPKPGTGVMPALTMPMVTDNAVTVTSTSSSTATTVTLGF
GDKFKQPKGSWNCSVCLEQNTAEYSKCVACESEKPGSSVPVTSSSVSAFSASSGGFLDLD
KFKKPEGSWECEVCLVQNEAEATKCVACENVKPGTKAELKGFGTAAVSTNAAMPSFTFGV
PSSSSESSQTLGSTGSFKFGEQSSFKFGIASESASSNTVTGGFKFPTGSGNFKFGVSSSD
SKSEDSKKESKSNIFTFGLPSTSSQAPSTFQFGTTSLGQQEKKEEPVLGGFGFAATSTSS
IATNENKTGVSGFTFGTMAEKDVASPALPFKKSDEKKDETVSTKGSFSFGSVESAPASQF
VLGRAEEKQDSVTSAGPLAFGKKTDNEELKAQPIFSSGTAEHTKEESTAKPVFNFSFGKP
SEKESEQAKAPFAFGAQTSTCDQGASFSFLNSSSSSTAAPTTSANSSSMFGSTLSSSNPQ
PVPTPFVFGQPSNTVTSSVFGNPAESATSQSFGFSQENKPATTSSSTGSTLTPFLFGSGE
SSTNAANSGFTFGATTTSSSTGSSSSFLFGSGPPAPAAGPAFGAGQPPAFGPSPGSSQPS
APSFGSLSTTLFSAGSHPAPSAFGSVTSSTQPSVFGQQATQQPAFGSGTPSAGSVFHFGS
TTTNFNFPNNPGVFTFGANPPAPAAPAPPSGTPGFSFNQPAAFTVGTNGKNVFSASGSSV
PGRRIKTAVRRRK
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggtggcagcggtggcggcggcggcggtaagatccggacccgacggcaccac
ctgggagccgcgaagccgccctacgcgaggggcaagcagcagctggggctcattagcaga
gtgaccgaatcagtgaaaaacatcgtgccgggatggttgcagaagtatttcaataaaagg
gaagataaatgtgtagatacgaatgaatcggcaaacgaggaagagaatccagtaaattat
caccataattatgcaaatgaagatgccttggtaattgatgggagaatcacgcctgaatca
gcaagaattaatttagaagaaccatccacaagcaggtctgcactgaacttctcagatgtg
ttaacaaggccctctcttcaccggagccatttgaactgcactgtattggattccacagtc
ccacactgtcagccctccacatcatcttcacttggcatcggcagtcctgggctgtccctc
gtaaaggaaataaaagattctacctctcagcatgatgacgataacatctcaacaaccagt
ggcttctcctctagagcatctgataaagatatcacagtttcaaaaaatacttcagcacca
ctgctctggtccccagaggctgaaagatctcattccctctcacagcatcctgcatctagc
tctaaaaaacctgcattcaatttatctgcttttggatctccctctccttcacttggaaac
acttctgtctttaagacaagacagcttggggattctccgttttaccctggaaagacctct
tatggtggtgcagctgcagcagcaaggcagacaaaagtgcagatttctgcttaccagcca
ccgataaaaagacagatgaaagctaaacaagcaaatgtgcaatcctatggtgtgacaagt
tccacagcgcggcgcatcttgcagacattggagaagatgtcaagccctttggcggatgct
aaaaggattccatcttctgtttctagtccactgtcttctcctgtggacaggactgtgctg
aatgtgactagcttccaatccagacaaaaccagatggattctcagcatccacctgtccag
aaacttgtgacaccaaagccaatctccctgacagggagtcgaatcacatattttaaacca
tctctgaaatcagctactagttccagaaaaattcaccaaagggcagatacagaccatcaa
gacatgatagaggagagttttcctgcagaacagcctgtaaaatcatctgaaagcaatctg
agctaccccaaacccaatactcctgcatccaacggtctgtcttcaggaggaagaatggat
agtgcctgtggcaagatgagaagggaaagagagcgatactgtgcatcaagacctggacaa
aaacaacaactggagatggagcaagaactacctgaagtaccgctgcccatcagtaatgca
tcgctgccaacattcaacttcagtttccctgccagtagtgctgtctcttcatcacccagc
actgtttcaaaagcagtggtgaacaaggtacaaccagcaagtaatgttgggagtcctacg
tttgtattttcatctccaattgtgaaatctactgaggtggaagtgctacctccattgtct
cagattaagtttacatttagtgttcctgttgtaaagtcatcagagctttctggatccact
gatacaccagtgacatccattcttagtccaggtagtgccactgtaaacagcaccagcaat
aagaaggaagaggaagaagaatatgatgggttctgcaaacctgctaagttcttaaagcaa
ggaagtgtgttagacattctaaaaagccctggctttatgtctgggaaatcaccctcctgt
tcatctgcacagcctgttacaagcacagtggtctatacaaggcctgcaataagtagtttt
tctgcaggtaaagacacctctaaacaagcatcctcgttttggcagtctgacacacacgac
ccatgcctgcagaacaaaaccaccgatggcaaatgtgtaacatgtgaagctgctaaagtg
tccactgttgagagtacaaagcagacgataagtgtgagtcagtgtgtctcctccaagaca
acagtccctacagcagtgacactgggctttgaagacaaatttaaaccggcacccaacacg
tgggattgtgatacctgtctggtccagaacaaacctgaagctacaaaatgtgtagcatgt
gagacaccaaagcctggaacaggagtgatgcctgctctgacaatgccaatggtcacggac
aacgcggtgacagtgacatccacctccagcagcactgccacaacagtcactctggggttt
ggagacaaatttaaacagccgaaaggctcttggaactgttcagtgtgccttgaacaaaac
acggcagaatacagcaaatgtgtagcttgtgagtctgagaaaccagggagttcagtgcct
gtgaccagtagcagtgtttctgcattttctgcttcttctggaggttttctggatttagac
aaattcaagaagcctgaaggaagttgggaatgtgaggtctgcttggtccaaaacgaagca
gaagccacaaaatgcgtagcctgtgaaaatgtgaagccaggcaccaaagcagagctcaaa
ggttttggtactgctgctgtgtctacaaatgctgcaatgccatcatttacattcggtgtc
ccatcatcgtcctctgaatcttctcaaaccttaggtagcacaggaagttttaaatttgga
gaacaaagtagctttaaattcggcattgcatccgaatctgcatcgtccaacactgtgact
ggaggatttaagtttcctactggttcagggaacttcaagtttggagtttcttcctcagac
tctaaatcagaagacagtaagaaagaaagtaaaagtaacatttttacctttggacttcca
tctacaagcagtcaggctccttcaacatttcagttcggaacaacgagtctggggcagcag
gaaaagaaagaggaaccagttttgggaggttttggtttcgctgcaacttctacttcttcc
atagctactaatgagaataaaactggagtcagtggcttcacttttggaactatggcagaa
aaggacgtagcatcacctgctttgccatttaagaagtcagatgagaagaaggatgaaact
gtttcaacgaagggaagcttctctttcggcagtgtggagtctgcacctgcttcacagttt
gttttgggaagggcagaagagaaacaggactctgtcacttctgctggtccgttagcattt
ggaaagaaaactgacaatgaagagttaaaggcacagcctatcttttcatctgggacagct
gagcataccaaagaggagagcacagcaaaacctgtattcaattttagttttggtaaacca
tcggaaaaggaaagtgagcaggcaaaggcaccttttgcatttggggcacaaaccagtact
tgcgatcaaggagcatccttcagcttcttgaactccagttcctccagcacagctgcaccc
actacttcagccaacagcagcagcatgtttggcagcaccctctcctcctcaaaccctcag
ccagttcccactccctttgtgtttggacaacccagcaacactgtgaccagctctgttttt
ggcaatcctgcagaatctgcaacatctcagtcatttgggttctctcaagaaaacaaacca
gcaaccacatcttccagcactggctcgactcttactccatttctctttggttcaggagag
agcagtaccaatgcagcaaattcaggatttacttttggagcaacaactacttcaagttca
acagggtcatcgtcttcgtttctgtttggctctgggcctccagcgcctgctgctggccca
gcctttggcgccggtcagccaccagcatttggcccaagcccaggctccagccagccaagt
gctccaagttttggatcgctgtcgacaacgttgttttctgctggctctcaccctgctcct
tctgcctttggctcggtgacgagcagcactcagccctctgtgttcggacagcaggcaacc
caacagccagcttttggctctggtacccccagtgctggttctgtgttccattttggaagt
actactactaatttcaactttccaaataacccaggggtattcacttttggtgcaaatcct
cctgcaccagcagctcctgcaccgccttctggcactccaggattttcgttcaaccagcct
gcagcatttacagtggggactaatgggaaaaatgttttctctgcctctggatcttcagtt
cctggtcggaggataaagactgcagttagacgtagaaagtaa
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integrated database retrieval system
