Aphelocoma coerulescens (scrub jay): 138106919
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Entry
138106919 CDS
T10543
Symbol
ZCCHC2
Name
(RefSeq) zinc finger CCHC domain-containing protein 2 isoform X1
KO
K22700
Zinc finger CCHC domain-containing protein 2
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
138106919 (ZCCHC2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
138106919
NCBI-ProteinID:
XP_068864379
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Position
2:complement(81830584..81875616)
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AA seq
1178 aa
AA seq
DB search
MLKMKLPLKQTSHKAAAAEDGTAAGLKEPSGALDCHLPLQQQVPRARGGAAAAAGRGCGL
ERPSRLHGLGPGPGPGPPPPPASLGAPGGGGPGSAAARTDKETVYEWFGLVLGSAQRLEF
MVGLLDLCNPLELRFLGSCLEDLARKDYHCLRDSEAKANGLSDPGQLGDFRDPAVRSKLI
VYLALLGSENREAAGRLHRLLPQVDSILQSCPAARRAPAEEEEEEEEEGDVVVVMDGAAE
NGQAGLPAAQGLGCGAQEELLLLFTMASLHPAFSFHQRVTLREHLERLRRALCGDQEEEG
FGRHPAQNNFSHDDCMSSNETSLLERTTAPHDGLPMASHRPQREAVHIEKITLKDVSRKR
ADKHLEYTFKVTWSDFSVTCVTKTHQELQEFLLKLPKELSSEAFDKAILRALNQGFQKRE
ERRHADLEPIIRQLFSNTSQAFLQNQRVYNFFQSISSESLHTHSNLQPSLKTVKTSEHFK
EDSSEASSQEEDVMQHTAVHKKHNGKSPVANSTSSAKCSSLDSLNIQHSEQNGVMDWRRK
SCIVQQHPEHCTNLLDQHTVEKRSLSTVSKKKGKPQLEKEKAKKTDCRLTNRSNGVRVAA
SQHICTGTAKDLNLDAGSGHDTCGETSSESYSSPSSPRHDGRESFDSEEEKDRDTDSNSE
DSGNQNTTRFTGYSAVSSSNMNKSSAQISSVNNENGSLSEDPLNAKFQHISFMPALHCVM
HSAAQKPEAVVPPPISADGKTMGMLVTTPVAVSPVRESANSPPAGMGPVTSGEPEKRLEL
MASPLPVPSSFLPHSVQPGSPALHLAIHRLKIPSPQGSSESCTVNGPQQPTGNLSIGSPN
TAFIPVHNPGSFPGSPVPTTDPITKPASQVVGLNQMVPHIEGNPGAIPQPTNLKVVLPAA
GLSTAAPPPPPASYALPGSPHATSVLPNQNTNVLSTGATSSPPQSAGLGVGQVQSTVPPA
IPTHTPGPAPSPSPALTHSTAQSDSTSYINAVGNNNTNGTMLPPQQLGSGPCGSCGRRCS
CGTNGSLQINSYFYHNPLHGQVYRVPSFFTLPSLCNGSYLNQAHQSNGTQLPFFLPQSPY
ANGLMHDPVMGSQANYGMQQMAGFGRFYPVYPAPNVVANTNGSGPKKNGNVSCYNCGVSG
HYAQDCKQSSMEASQQGTYRLRYAPPPPPSNDTLDSAD
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagatgaagctgcccctgaagcagacgagccacaaggcagcagcggcggaagat
gggacggcggcggggctgaaggagcccagtggtgccctggactgtcacctcccgctgcag
cagcaggtgccccgggcccgtgggggtgccgcggcggcggcgggaagggggtgtgggctg
gagaggccgagccggctgcacggcctggggccggggcctgggcccggcccgccgcccccc
cccgcctcgctgggcgctccgggcggcggcggtcccggctcggcggccgcccgcaccgac
aaggagacggtgtacgagtggttcgggctggtgctgggctcggcgcagcgtctggagttc
atggtggggctgctggacctgtgcaaccctctggagctgcgattcctgggctcctgcctg
gaggacctggcccgcaaggactaccactgcctccgcgactcggaggccaaggccaacggg
ctcagcgaccccgggcagctcggcgacttccgcgacccggccgtgcgctccaagctcatc
gtctacctggccctgctgggctccgagaaccgcgaggccgccggccgcctgcaccgcctc
ctgccccaggtggactccatcctgcagagctgcccggcggcgcggcgggccccggccgag
gaggaggaagaggaggaggaggagggggacgtggtggtggtgatggacggagccgcggag
aacgggcaggccgggctccccgccgcccagggcctgggctgcggcgcgcaggaggagctg
ctcctgctcttcaccatggcctcgctgcacccggctttctccttccaccagcgggtcaca
ctgcgggagcacctggagcggctgcggagagccctgtgcggggaccaggaggaggagggc
ttcggccgccacccagcccagaacaacttttcccatgatgactgcatgtcaagtaatgag
accagtttgctagaacgaaccacagcacctcatgatggactcccgatggcttcccacaga
cctcagcgagaagctgtacacattgagaagataaccctgaaagacgtatcaagaaaaagg
gctgacaaacatttggagtacacattcaaagtaacttggtccgatttttcagtaacgtgt
gtaacaaaaacacaccaggagcttcaggaattcctgctaaaactcccaaaggaactgtct
tctgaagcatttgacaaggctattttaagagcactaaatcagggttttcagaagagggaa
gaacgaaggcatgctgatcttgagcccataatcaggcagctattttcaaatacatcgcaa
gcttttctgcagaatcagagagtatacaacttcttccaatcaatttcatcagaatctttg
cacactcacagtaacttacaaccctctttgaagacggttaagacatcagaacacttcaag
gaggacagttcagaagcttcaagtcaggaggaagatgtaatgcaacacacagcagttcac
aagaaacataatggaaaaagtcctgttgccaacagcactagcagtgcaaagtgttcttca
ctggatagccttaacatacagcactcagagcagaatggagtaatggactggagaaggaaa
agctgtattgtccagcagcacccagagcactgtactaacctacttgaccagcacacagtg
gaaaaacgaagtctgtctacagtaagcaagaagaaaggaaagccacagctggaaaaggag
aaagcaaagaaaactgactgcaggttgactaacaggagcaatggagttcgagttgcagca
tcacagcacatctgtactgggacagcaaaagatctgaatttggacgctggatctggtcat
gatacgtgtggagaaacatcatctgaaagttacagttctccttctagtccacgacatgat
gggagggaaagctttgatagcgaagaagaaaaagacagagatacagacagcaattctgag
gactctgggaatcagaatacaaccaggtttacaggctacagtgctgtcagttcatcaaat
atgaacaaatcatctgctcagatctcttcagtgaataatgaaaatgggagcctttcagaa
gatcctttgaatgcaaagtttcagcatatttccttcatgcctgccttacactgtgtgatg
cacagcgctgcccaaaagcctgaagcagttgtcccgccacccatatctgcagatggtaaa
acgatgggaatgctggttaccacacctgttgctgtctcgccagtgagagagtctgcgaat
tcccctcctgcgggaatgggcccagtgacctctggtgaacctgagaaacgccttgagctg
atggcttcccctttgccagtcccatcctctttccttccacattctgtccagcctggtagc
cctgctttgcatttggcaatacataggttgaaaatcccgtctccacagggatcatcagaa
agttgcacagttaatggaccacagcagccgacaggaaacttaagtattggatcaccaaat
actgcctttatcccagtccacaatccaggtagtttcccaggatccccagttcctactaca
gatcccatcacaaaacctgcgtcccaggtggtaggactgaatcaaatggtgcctcacatt
gagggaaacccaggagcaatccctcagcctaccaatctcaaggtagttcttccagcagcc
ggtctctccacagcagcgccgccacctccaccagcttcgtacgctttgccaggcagccct
cacgctaccagtgtgttgcccaaccagaatacaaacgtgctgagcactggagcaacttcc
tcaccacctcagtccgctggcctcggtgttggtcaggtccagtccactgttcctcctgca
atcccgacacacacgccaggccctgcccccagcccaagccccgctctaacacacagcact
gcacagagtgacagcacatcttacataaatgctgttgggaataacaacactaacgggaca
atgttacctccgcagcagttgggatctggcccttgcggttcttgtggacgtaggtgtagc
tgtgggaccaatggcagccttcagattaatagctatttttatcataacccacttcatgga
caagtctacagagttccatctttcttcactctgccatcactttgcaatggcagctacctc
aatcaagcacatcaaagcaatggaacacaacttccgttcttcctgcctcagtctccgtat
gcaaacgggcttatgcatgacccagtgatggggagccaagccaactatggtatgcagcag
atggcaggattcgggaggttctatcctgtatatccagcacctaacgtagttgccaacacc
aatgggtcaggacccaagaagaatgggaacgtttcatgttacaattgtggtgtaagtgga
cactatgcgcaggactgtaagcagtcatccatggaggccagtcaacaaggcacttacaga
ctgagatacgcacctccccctcccccttccaatgataccttggattctgcagactga
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