Aphelocoma coerulescens (scrub jay): 138107138
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Entry
138107138 CDS
T10543
Symbol
GPC6
Name
(RefSeq) glypican-6
KO
K08112
glypican 6
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
acoe00535
]
138107138 (GPC6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
acoe00537
]
138107138 (GPC6)
Proteoglycans [BR:
acoe00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
138107138 (GPC6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
acoe00537
]
Others
138107138 (GPC6)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Glypican
PAF-AH_p_II
Motif
Other DBs
NCBI-GeneID:
138107138
NCBI-ProteinID:
XP_068864551
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All DBs
Position
1:complement(42294773..43049237)
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AA seq
639 aa
AA seq
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MCVCARLSPPRLAKVFLGGRGAPGPPPPQPGGAAEARRGGGGGSAGLPRRAGVALRAMPA
ARGAALRCALARPLLPVPPPPLLLLLLLLPALPAAGTEGKARSCGEVRQAYSAKGFSLAS
VPYQEIAGEHLRICPQEYTCCTSEMEDKLSQQSKLEFENLVEETSHFVRTTFVSRHKKFD
EFFRELLENAERSLNDMFVRTYGMLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWA
RLLERMFQLINPQYHFSEDYLECVSKYTDQLKPFGDVPRKLKVQVTRAFIAARTFVQGLT
VGREVANRVSKVSPTPGCIRALMKMLYCPYCRGLPTVKPCNNYCLNVMKGCLANQADLDT
EWNLFIDAMLLVAERLEGPFNIESVMDPIDVKISEAIMNMQENSMQVSAKVFQGCGQPKP
APALRSSRSVPENFNTRFRPYNPEERPTTAAGTSLDRLRTIWRTMQHGVTDIKEKLKISK
KFWSTLPYTICKDERVTAGPSVEEDCWNGHTKARYLPEIMNDGLTNQINNPEVDVDITRP
DTFIRQQIMALRVMTNKLKNAYNGNDVNFQDTSDETSGSGSGSGCTDDICPTEFDFVTTE
APPVDSDRREVEASATQPGWSLQTLLVVFLSLLLQRQWR
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtgtgcgcgcctatctcccccccgcctcgcaaaagttttcctgggcggccgg
ggggctcccgggccgccgcccccgcagccggggggcgcggcggaggcgcggcggggcggc
ggaggcggcagcgcgggacttccgcgccgcgcgggagttgcgctccgcgccatgccggcg
gcgcggggggctgcgctgcgctgcgccctggcgcggccgctgctgccggtgccgccgccg
ccgctgctgctgctgctgctgctgctgccggcgctgccggccgcggggaccgagggcaag
gcgcggagctgcggcgaggtgcggcaggcgtacagcgccaagggcttcagcctggccagc
gtgccctaccaggagatcgcaggggaacatttgagaatctgccctcaggaatatacatgc
tgcacctcagaaatggaggacaagttaagtcaacagagcaaactggagtttgaaaactta
gtggaggagacaagtcactttgtacgcacgactttcgtatcccggcacaagaagtttgac
gagttttttcgagaacttctggagaatgcggaaagatccctaaatgacatgtttgtccgg
acgtatggcatgctgtacatgcagaactcggaggtgttccaggacctcttcacagagctg
aagcgttattacacaggaggcaatgtgaacttggaggaaatgctaaatgacttctgggct
cggctgctggagcggatgttccagcttataaacccccagtaccatttcagtgaggactac
ctggagtgtgtaagcaagtacacagaccagctgaagccgtttggagatgttcccaggaag
ctgaaggttcaagtgactagagcgttcattgctgcacggacctttgttcaggggctgaca
gtaggcagagaggttgcgaacagagtatccaaggtcagtcccaccccagggtgcatccgg
gcgttaatgaagatgttgtactgcccttactgcagaggacttcccactgtgaaaccttgc
aacaactattgcctcaatgtaatgaagggctgcctagcaaatcaggctgatttggatact
gagtggaatctgttcatagatgctatgcttctggtagcggagagattagagggaccattc
aacattgaatcagtcatggatcctattgatgtcaagatttctgaagccatcatgaacatg
caagaaaacagcatgcaggtgtcagcaaaggttttccaaggatgtggccaacctaaacca
gcacctgccctgagatcttcccgctctgtccctgaaaatttcaatacccgatttagacca
tataacccagaggagcgacctacaactgcagctggcacaagtttggataggctgaggact
atctggaggacaatgcaacatggtgtaacagacattaaggaaaagctaaagatctctaaa
aagttctggtcaacattgccctacacaatctgcaaggatgagcgagtgacagccggtccg
tcagtcgaggaggactgctggaatggccacaccaaggcgagatacttgcctgagattatg
aacgatggcttgaccaaccagatcaacaatccagaagtagatgtggacatcacaaggcca
gacaccttcattcgacagcaaatcatggccttacgtgtcatgactaacaaactgaagaat
gcatataatgggaatgatgtcaacttccaggatacaagtgacgaaaccagcggctcgggc
agcggaagcggctgcacagacgacatctgtcccaccgagtttgatttcgtcaccaccgaa
gcaccgcctgtcgactcggacaggagggaggtggaggcttcagccacacagcctggctgg
tcactgcagacgttgctcgtcgtcttcctcagtctcctactgcagagacagtggagataa
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