Aphelocoma coerulescens (scrub jay): 138107204
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Entry
138107204 CDS
T10543
Symbol
LRFN2
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acoe04515
]
138107204 (LRFN2)
04990 Domain-containing proteins not elsewhere classified [BR:
acoe04990
]
138107204 (LRFN2)
Cell adhesion molecules [BR:
acoe04515
]
Immunoglobulin superfamily
SALM family
138107204 (LRFN2)
Domain-containing proteins not elsewhere classified [BR:
acoe04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
138107204 (LRFN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_5
ig
LRR_1
fn3
Ig_2
LRR_9
Ig_C17orf99
LRRCT
LRR_14
Motif
Other DBs
NCBI-GeneID:
138107204
NCBI-ProteinID:
XP_068864587
LinkDB
All DBs
Position
3:37575522..37610790
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AA seq
763 aa
AA seq
DB search
MEKLLCGILVFGMAVTVNACPKYCVCQNLSESLGTLCPSKGLLFVPLDIDRRTVELRLGG
NFIINISRQDFANMSGLVDLTLSRNTISYIQPYSFTDLESLRSLHLDSNRLPEIEEDTLR
GLINLQHLILNNNQLSSISDEAFEDFLLTLEDLDLSYNNLRSIPWESIRKMINLHQLSLD
HNLIDYITEGTFADLQKLARLDLTSNRLQKLPPDPIFARSQVIPLIVTPFSPPLSLSFGG
NPLHCNCELLWLRRLDRDDDMETCASPPSLKGRYFWYVREEEFVCEPPLITQHTHKLLVL
EGQTATLKCKAIGDPTPIIHWVAPDDRLIGNSSRTAVYDNGTLDIHITTSKDYGTFTCIA
ANAAGESTATIELSIVQLPHLSNGTGKAAPPKSRLSDITSSTKSNRGETKGPPERAVLVS
DVTTTSALVKWTVSKSAPRVKMYQLQYNCSDDEVLIYRMIPATNKAFVVTNLVSGTGYDL
CVLAMWDDTATTLTATNIVGCAQFFTKEDYPQCQSMHSQFLGGTMILIIGGIIVATLLVF
IVILMVRYKVCNNSQGKMSNVSNVYSQTNGAQPVQNGVLPQVNPKVVVRNELMEFNCQSA
RSSISSSSSSANSRDCDNYSLQSEQGTLSSKWRPPSRSKHNIDRLMGAFASLELKCQKKE
EMTDSRTSTVARHSDKEPLLGQTESKFRSFLMLPLEGKTKRSHSFDMGDFATSQCCTYPK
KITNIWTKRSLSVNGMLLQYDDNDLTGAKGTFGSSEWVMESTV
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattgctctgcggcatcctggtgtttggaatggctgtcacagtcaacgcttgt
cccaaatattgtgtctgtcagaacctgtctgagtcactggggactttgtgtccttccaag
ggtctcctttttgtacctctggacatagatcgaaggacagttgaactccgtcttgggggc
aactttattattaatatcagcagacaagattttgccaatatgtctggacttgttgacctt
actttgtccagaaacaccattagttacatacagccctactctttcaccgacttggagagc
cttcggtctttacatctggacagcaacaggttgcctgagattgaagaggatactttaaga
ggtttaattaaccttcagcatttgattttaaacaacaaccagctaagcagcatttctgat
gaagcctttgaggattttttgctgacgttggaagacttagacctttcctacaataacctc
cgaagcattccctgggaatctataagaaagatgataaacttgcaccagctcagtttagat
cacaacctaatagattatataacagaggggacatttgcagatcttcagaaattggccaga
ttggatctaacatccaacagacttcagaaactcccccctgaccctatatttgccagatcg
caagtaattccattgattgttaccccgttttctccacctctgtccctcagttttgggggc
aatccactgcattgcaactgtgagctactgtggttaaggcgacttgacagagacgacgat
atggaaacttgtgcttctcctccaagtctaaagggaaggtacttctggtacgtacgggag
gaggaatttgtttgcgagcctcctcttattacacaacatactcacaagctgctggtttta
gaagggcaaactgccacactgaagtgcaaagccattggggatcccactcccatcattcac
tgggtggcccctgatgaccgtctcatcggaaactcctcgaggacagctgtctacgacaat
ggcactttagatatacacatcaccacctccaaggactatggaactttcacatgcatagca
gccaatgctgcaggagagtccactgcaacaattgaactctcaattgttcagcttccccat
ctcagcaatggcacaggcaaagcagctccaccgaaatccaggctctcggacatcaccagc
tccaccaagtccaatcgtggagaaacaaaaggcccaccagaaagggctgtcctggtgtca
gatgtgaccactacctcagctttggtcaagtggacagtcagcaagtcggcccctcgggta
aaaatgtatcagctgcagtataactgctcagatgatgaagttctgatctacaggatgata
ccagctacaaacaaggcctttgttgtaaccaaccttgtttctggaacaggctatgacctc
tgtgtcctggcaatgtgggatgacacggccacaacccttactgccaccaatattgtggga
tgtgcccagttcttcaccaaggaagactaccctcagtgccagtcaatgcacagccagttc
ctgggtgggaccatgattctgatcattggaggcatcattgtggcaactctgttggtattc
attgtaattctcatggtccgctataaggtctgcaacaattcccaggggaagatgtctaat
gtcagcaacgtctactcacagacaaacggagcacaaccagttcagaacggagtcttgccc
caagtcaatcccaaagtggtggtgagaaatgaacttatggagtttaactgtcagtctgca
cggagcagcatctcctcttcctccagctctgcaaatagccgtgactgtgacaactacagc
ctccaaagtgaacagggcacattgtccagtaaatggaggcctccttcccggtcaaaacac
aatattgaccggctaatgggagcttttgcctccctggaactgaaatgtcagaaaaaggag
gaaatgacagactccagaacttccacggtggcccgccactcggacaaagagccactgctg
ggccagacggagtccaaattccgcagcttcctcatgttgcctctggagggcaaaactaaa
cgtagccattcttttgacatgggagactttgccacatctcagtgttgcacctacccaaaa
aagataacaaacatttggacaaagaggagcctctcagtcaatggcatgcttttgcagtat
gatgacaatgacctaacaggagcaaaagggacttttgggagctcagagtgggtaatggaa
agcacagtgtaa
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