Aphelocoma coerulescens (scrub jay): 138107532
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Entry
138107532 CDS
T10543
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04517
IgSF CAM signaling
acoe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
138107532 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138107532 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
acoe04812
]
138107532 (SPTBN1)
Cytoskeleton proteins [BR:
acoe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
138107532 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
138107532 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CENP-K
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
138107532
NCBI-ProteinID:
XP_068864918
LinkDB
All DBs
Position
3:2789130..2906040
Genome browser
AA seq
2359 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAGSPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPGEKIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYH
LECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEK
LESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRT
QTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKNR
EAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWDELESTTQTKAQRLFDANK
AELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQS
QARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILWV
GERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAEV
IQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYAG
LKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEVLGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRD
LMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKH
YASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSS
REIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPPT
PETKVAEDGDSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSSKES
SPVPSPTSDRKAKSGVQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRSWHN
VYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKDAVCEVAVDYKKKKHVFKLRLTDGNE
YLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSPGKR
EKDKEKDKEKRFSLFGKKK
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacggtagcgacagattacgacaacatcgaaatccaacagcagtacagcgac
gtcaacaaccgctgggatgtcgacgactgggacaatgagaacagttctgctcggctcttt
gagcgctcccgcatcaaggctttggctgatgaacgtgaggcagttcagaagaagaccttc
acaaagtgggtgaattcccacttggctcgtgtgtcctgccgaattacagatctgtacact
gaccttcgagatgggaggatgctcatcaaactcctggaagtgctttcaggagagagactt
cctaaaccaaccaaaggaaggatgcgcatccattgcctggagaacgtggataaagccctc
cagttcctgaaagagcaacgagtgcacctagaaaacatgggatctcatgatattgtggat
gggaatcacaggctgacacttggccttatttggactattatcctgagattccagatccaa
gatatcagcgttgaaactgaggacaataaagagaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaaaacagctgggtaccccaatgtcaatatccacaactttacaaca
agctggagggatgggatggcattcaatgcactgatccataagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gcagagcagcaccttggtcttaccaagctcctggaccctgaggatatcagtgttgatcac
cctgatgaaaagtctatcatcacctatgtggtgacgtattaccactacttctccaagatg
aaagctttggccgttgaaggaaaacgtattggaaaggtgcttgacaatgccattgaaaca
gagaaaatgatagaaaaatacgagtccctggcttctgacctgctggagtggattgagcaa
accattatcatcctcaacaatcgcaaatttgccaactccctggttggggtgcagcagcag
ctgcaggcgttcaacacttaccgcacagtggagaaaccacccaaatttacagaaaaaggg
aacctggaagtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagtg
tacatgccgagggagggcaaactcatctctgacattaataaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacggagattcgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtctcgtttctcaggacaattttggctttgacctcccagcagtggaggctgcc
acgaagaagcacgaggccatcgagacggacattgcggcctacgaggagcgggtccaggcc
gtggtggcggtggccaaggagctcgagactgaaaactaccacgacatcaaacgcatcact
gcgaggaaggacaatgttatccgcctgtgggagtatctcctggagctgctccgggcacgg
agacagcggctggagatgaaccttgggctgcagaagattttccaggaaatgctgtacatt
atggactggatggatgagatgaaggtgcttctgctgtcccaagactacggcaaacatttg
ttgggagttgaagacctgctgcagaaacatgctctggtggaagctgacattgctattcag
gctgagagagtgagaggggtcaatgcctctgctcagaaatttgccaccgatggagaaggt
tacaagccctgtgacccgcaggtgatccgggatcgcgtggctcacatggagttctgctac
caggagctctgccagctcgcagccgagcgccgcgcacgcctcgaggagtcccggcgcctc
tggaaattcttctgggaaatggctgaagaggagggctggatcagggagaaggaacagatc
ctgtcatctgatgactatgggaaggacctaaccagtgtcgtccgactcttgagtaaacac
aaggcgtttgaggacgagatgagtggccgcagcggccactttcagcaggcgataaaagaa
ggtgaagacatgattgcggaagagcattttgggtctgagaagatcagagaaagaattaag
gatatccgggagcagtgggctaacctggagcagttatctgccattaggaagaagcggctg
gaggaagcctctctccttcaccagttccaggctgatgctgacgatattgatgcgtggatg
ttggacatcctcaagattgtctccagcaatgatgttggccacgatgaatattccactcag
tccttggtcaagaaacacaaagatgtggctgaggagattgcgagctaccggccgaccatc
gactctcttcacgagcaggccaaggccctgccacaggagcatgcggggtccccagatgtg
caaggcaggttgtctggaatcgaggagagatacaaagaggttgctgagctgacccggctg
cgtaaacaggccctgcaggataccctcgctctctataagatgttcagtgaggcagatgct
tgcgagctttggatcgacgaaaaggagaagtggctgaataatatgcagattccagagaag
ctggaggacctggaagtgatccagcacaggtttgaaagcttggagccagaaatgaacaac
caggcgtcccgcgtagccgtggtgaaccagattgccaggcagctgatgcacagtggccac
cccggtgagaagatcaaagcacagcaagataaactcaacacaaggtggagccagttcaga
gaactggtagataggaagaaggatgctctgctctctgctctgagtatccagaactaccat
cttgaatgtaatgaaaccaaatcctggatcagggaaaagaccaaagtgatcgaatccaca
caagacctgggtaacgacctggctggagtgatggccctgcagaggaagctgacgggcatg
gaacgggacctggtggccattgaagccaagctcagtgacctgcaaaaggaggcggagaag
ctggaatcagagcatcctgaccaggcacaagccatcctttcacggcttgcagagatcaat
gatgtgtgggaagaaatgaagaccaccctgaagaaccgggaagagtccctgggagaggcc
agcaagctgcagcagttcctgagagatctggatgacttccagtcctggctctccagaaca
cagactgcaatcgcctccgaagatatgcccaacaccctgacagaggctgagaagctgctc
actcagcacgagaatatcaagaatgaaatcaacaactatgaggaagattatcagaagatg
agggacatgggtgagatggtgacacaagggcaaactgatgctcagtacatgttcctacgc
cagcgcctccaagctttggacacgggatggaatgagctgcacaaaatgtgggagaacagg
caaaatctcctttcccagtctcatgcctaccagctgtttctcagagataccaagcaagca
gaagctttccttaataaccaggagtacgttctggcgcacacagagatgccaactaccttg
gaaggagcagaagctgctattaaaaagcaggaggacttcatgaccaccatggatgccaat
gaggaaaagatcaatgcagttgtggagacaggcaggaggctcgttagtgatgggaacatt
aactctgataaaatccaggagaaagtggactctattgatgacagacataggaagaaccgt
gaagcagccagtgaacttctgatgagactgaaagataacagggatctccaaaagtttctt
caggattgccaggagctctccctctggatcaatgagaagatgctcacagcccaggatatg
tcctatgatgaggcaaggaacctgcacagcaagtggctgaagcatcaggcattcatggca
gagcttgcatccaacaaagagtggctggagaagattgaaaaggagggaatgcagctcatt
gcagagaaaccagagaccgaggccgtggtgaaggagaagctgacgggtctccaccaaatg
tgggacgaacttgaatccaccacccagaccaaggctcagcgtctctttgatgcaaacaag
gcagagctttttacccagagctgtgcagacctggataagtggctgaatggtctggagagc
caaatccagtcagatgactacggaaaagatctcactagtgtcaacatcctgttgaagaag
cagcagatgctggagaatcaaatggatgtccgtaagaaggagatagaggagctgcaaagc
caggcaagggctttgagccaagagggcaagagcacagatgaagtcgatggcaaacgcctt
actgtagaaaagaaattcttggagctgctagagcctttgaatgagagaaaggccaacctg
ctggcctccaaagagatccaccagttcaaccgggatgtggaagatgaaattttgtgggtt
ggagagaggatgcccatagctacatctactgatcatggacacaacctccagactgtgcag
ctactaataaagaaaaatcagacccttcagaaagaaatccagggccaccagcctcgtatc
gatgacatcttcgagaggagtcagaacataatcacagagagcagccccaatgctgaagtc
attcagcagagacttgcagacctgaagcagctgtggaacctcctcatcgaggagacggag
aagcgccacaagcgcctggaggagtctcacagggctcagcagtattacttcgatgcagcc
gaggctgaggcctggatgagtgagcaggagctctacatgatgtcagaagagaaagccaag
gatgagcagagtgcagtgtccatgctgaagaaacaccagattttggaacaagctgtagaa
gattatgctgaaactgtgcaccagctttcaaagaccagcagaactttggtggcagataat
cacccagaaagcgagcgcatcagcatgcgccagtccaaggtggacaagctctatgcgggc
ctgaaggacctcgctgaggagaggaggggcaagctggacgagaggcaccggctgttccag
ctcaaccgcgaggtggacgacctggagcagtggatcgctgagagggaggtggtggcaggg
tcccacgagctgggccaggactacgaacacgtcacaatgctgcaggagcggttccgggaa
ttcgcccgggacaccgggaacatcgggcaggagcgggtggatactgtcaaccacatggcg
gatgaactcatcaactccggccattcggacgctgccacgatcgccgagtggaaggacgga
ctcaatgaggcctgggcagatctcctggagctcattgacacgagaacacagatccttgca
gcctcttatgaactgcacaaattttaccacgatgccaaggaggtcttaggacgtatccaa
gacaaacataagaaactgcccgaggagcttggtagagaccaaaacacagtggaaacacta
cagagaatgcacacgacatttgagcacgatatccaggccctgggcacccaggtgcgacag
ctgcaggaggatgcagcgcgcctccaggctgcctacgctggggacaaggccgatgacatc
cagaagagggaaaacgaggtcctggaggcatggaaggcactgctggatgcctgtgagggc
cgcagggtgaggctggtggacacaggagacaaattccgcttcttcagcatggttcgggat
ctcatgctctggatggaagatgttatccggcagatagaagcccaggaaaagccaagggat
gtttcatccgtggaactcctcatgaacaatcaccaggggatcaaagcagaaattgatgcc
cgaaatgacagcttcactacgtgcattgagcttggcaagtctctgctggccaggaaacac
tacgcatctgaggagatcaaggaaaagctcctgcagctgaccgaaaagagaaaagaaatg
attgacaaatgggaagacagatgggagtggctgagactgattttggaggtgcaccagttc
tccagagatgcaagcgtggctgaggcctggctgctgggccaggagccctacctgtccagc
cgtgaaatagggcagagcgtggatgaggtggaaaaattaatcaagcggcacgaagcgttt
gagaaatccgcagctacctgggacgagaggtttgcagcactggaaagactgaccacgctg
gaactgctggaagtccgtcggcagcaagaagaggaggagcggaagaggcagccgcccact
ccagagaccaaggttgcagaggatggagactcccagcagcaatgggatgggacaaaagga
gaacaggtttcccaaaacggtttgccctcagaccaggaatctccacgggtggcagaaacc
gcagaaaccaatgaaatggtcaatggagctgcagaacagaggacgagttccaaagagtcc
agtcccgttccttccccgacgtcagaccgcaaagccaagagcggcgttcaggcccagact
gctgctaccctcccagccaaaacccaggagatcccctcagcccagatggagggcttctta
caccgcaagcatgagtgggagacacacagcaagaaagcctccagcaggtcatggcataac
gtgtactgtgtcataaacaaccaagagatgggcttctacaaggactcaaaagctgctgct
tctggcatcccctaccacaacgagatccccgtcagcttgaaggacgcagtctgcgaagta
gcggtcgattacaaaaagaagaagcatgtgttcaagctcagattgaccgatggcaacgaa
tacctcttccaagccaaagatgatgaggagatgaacacgtggattcaggccatcacatca
gcgatctcttcggacaaaatcgaagtgtccccgaccacccagagcactccagcctccagc
cgtgcccagaccctgcctgccagcgtcacaataaccagcgagtccagccctggcaagcgg
gagaaagacaaagagaaagacaaagagaaaagattcagcctttttggtaaaaagaagtga
DBGET
integrated database retrieval system
