Aphelocoma coerulescens (scrub jay): 138107547
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Entry
138107547 CDS
T10543
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
138107547 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoe04121
]
138107547 (LMO7)
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
138107547 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
PDZ
PDZ_6
LIM
PDZ_2
Motif
Other DBs
NCBI-GeneID:
138107547
NCBI-ProteinID:
XP_068864968
LinkDB
All DBs
Position
1:complement(50738236..50870088)
Genome browser
AA seq
1859 aa
AA seq
DB search
MDGREDAECDFPAAFAEARRWVEAVTGQSFGTEDFRAALENGVLLCDLINKIKPGIVKKI
NRLPTPIAGLDNINVFLKACENIGLKEAQLFHPGDLQDLSNRVTVKPEETNRRLKNVLIT
LYWLGRKAQSDPNYNGPYLNLKAFEKLLGQALTKALEESSQLSRSGRDSGYGDIWYVDRG
EPFSSSATHKRDDSFDSLDSLGSRSCTSFSSDITLKGGSEGCDSDTDSELPSKMHDSHKD
DRSYRRISVIEPKPTTDFNRFLPNKNKQTGYVPAPLRKKRTEKNEDNRRSWASPIFTESD
GTFSSGCETNPVASCQNSRAECGLTNPASLQIIYEYDSGSDSEDERRLPDVVLDDLANRR
FLIKKSPVSSAAPGHHFMLRNDSPKSCSRESYPAGPLAAMLEPLSNQRRQRQLDTKEENK
PRVNNPSQLSGYFDEDEEEVGIPNIEKDDLYFRKLCSSAPNTVVAFDKFLPKFWTPEEEL
LWKKIKKSSFKPWYKEIQGFSRKRSDSEDEEFAYKQSCTIAANQPRPGFDWNSSCRRDQN
YKPTAEYVGSSLSQIAEGKILESSDQPSQFSLLQALQKYTDYVSSEMETRIDPTSGPRLI
KCRKNVSFIPGCKQGDEENGYLYPDLENDDLFVRKTGAFHVNQVVLQDPRYLKKFSEQEP
PLEGEIILQPREGQTVIPDLEKDDMIFRKVLSQKKEVPLSGAPDKYHPALFPDPWSLPEE
IRSKFLCLLEKNAIPEERKSNGRVLSPSLQHKKDDMLTRKIESWKVGSNVQPVNFIPGPC
SEEDWKKWEAIREASKVRHKKRQMVERLFQKLSDEQGSKSLNDVSAEELQTMRKIRYEEL
QKIKEQLQEQDLKWQEDLAKWKSRRKSYTSELQKKKEEREEIERRASEVSGRSTKSLKEM
QQERQERDQDSYEQQKQEHNWAYSLNDDVFSEEKAPSTVAKDWSAAKDYRLEEDTSYSTK
DSKSVYATQPPKENLSESSAAREAPAPPESLAEEREQSPALLSTRYSVNAQTGSAQVSAS
LPRTYQKTDTSRLTSVVTPRPFGVHSRGISSLPRSFTMDDAQKYNGEVEKAKRTQTLFTS
ISFSQPDSAHPLSTGAFRSRGEEEEEEKGVQSTPPPSLPLPLKFQDQDSGSSIPKPDYGI
PPDSLSLASSAETASPTEPKDSKSMEQYSEMRISINQRPGHSRSFGFTTNWSSSGAIVQT
VEEGSPAALCQLHVDDEIIAVNGTKVSHMDYSQWEEAISRALETGNLVMDVRRYGKNDWG
KDLPSLPHVRHKILNLTSMATNIIGTSENKWIDATSGEKVSNVSTISTKRDFSSSLQSSG
TETKLINGMQGDLGSNEQRASEPISLKNLKRRSQFFEQGGPEPAMPDLPVPSISAPSRRV
WDQEEERKRQEKWQKEQDRLLQEKYQREQEKLREEWLRAKQEAEKESSKYFDEEQTVLTL
NTTSVTSQAPPVSSWRASPEANTPEEPEGDGGNELAAGLLHEEEGRRRLQEEGRIQEEAT
RHFEQEREQELELERRRKEREQQYAEEQRRQAEMEEQRQQAERQREVSVEVPQYQRHYER
YEVSKTIEDRAGHPLIDRHYERYEVSKTIEEQPGQSFADRNKSKSTTELNEFNTIRNGTQ
SKYSERSWNMGDSQKKSQKEQNLSAAELERQQILQEMRKKTSLHTDSSWIRQRSSSIHKE
PISLYSSSMRRGESLDNLDSPRMSSWRHHSWLNQSASSSSLSSSQDFSRPVSTSNRAYMC
TPSSSKAPPVATSVRAPSMSQTAPQAQSPLSTSQSGSQTRSRSVSGKKICSYCNNILGKG
AAMIIESLGLCYHLHCFKCVACGCDLGGSRSGAEVRIRNNKLFCNDCYIRFKTGQPTSM
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atggacgggagagaggacgcggagtgcgacttcccggcggcgttcgccgaagcccggcga
tgggtggaggcagttactgggcaaagctttggaactgaagattttcgagcagctctagaa
aatggagtcctgttgtgcgatttgattaacaagatcaaacctggcattgttaagaagatc
aatcgtctgccaactccaatagctggcttggataatataaatgtttttctgaaagcgtgt
gagaacattggactgaaagaagctcagctttttcacccaggagatcttcaggatttgtcc
aatcgagttacagtcaaaccagaggaaaccaacagaagactgaaaaatgtattgattaca
ttatactggcttgggagaaaagctcaaagtgaccctaattataatggtccatacctcaat
cttaaagcatttgagaagttattagggcaagcattgactaaggcacttgaagagtccagc
cagctgagcagaagtggcagagatagtgggtacggtgatatttggtacgttgaccgggga
gagcccttttcgtcttcagctactcataaaagagacgattcctttgatagcttggactct
cttggttcaagatcctgcacaagcttttcatcagatataaccttgaaaggtggcagtgaa
ggttgtgacagtgacacagactcggaactgccttccaaaatgcatgactcccataaagat
gacaggtcttaccgtaggatttctgtgattgaaccaaaacctaccactgacttcaatcgc
ttcttacccaacaaaaacaagcagacaggatatgtgccagcacctctaaggaagaagagg
acagagaagaatgaggacaacaggaggagctgggcaagtcccatcttcactgagtcagat
ggaacattttcaagtggatgtgaaacgaatcctgtagcttcctgccaaaatagcagagca
gagtgtgggcttacaaatccagcttccctccagatcatctatgagtatgacagtggctct
gattcagaagatgaaagaaggctgcccgacgttgttttggatgacttagcaaatcgtaga
tttctaatcaaaaagagccctgtaagctctgctgcacctggacatcatttcatgttgcgc
aatgactctcctaaatcttgctcgcgagaaagttatccagctggtccactagctgcaatg
cttgaaccactgagtaaccagaggaggcagaggcagttggatactaaagaggaaaacaaa
ccaagagttaacaatccttcacaattatctgggtattttgatgaggacgaggaagaagta
ggcatcccaaacattgaaaaagatgatctctattttcgcaagctatgttcttcagcacca
aatacagttgttgcttttgacaaatttcttcctaagttttggactccagaagaagaattg
ctatggaaaaaaatcaagaaatcctctttcaaaccctggtataaagagattcaagggttc
agtagaaagagatcagattctgaggatgaggaatttgcttacaaacaaagctgtaccatt
gctgctaatcaaccaagaccaggttttgactggaacagtagctgcagaagggatcagaat
tataagccaactgctgaatatgtgggaagctcattgtcacagattgcagaaggaaaaatc
ttggagtcttctgatcagcccagtcagttttcgttacttcaggccctgcaaaaatacact
gactacgtgtcttccgaaatggagaccagaattgatcctacttctggccctaggctcata
aaatgtagaaagaatgtttcctttataccaggatgcaagcaaggagatgaggaaaatggt
tatttatatccagatttggaaaacgatgatttgttcgttcggaaaactggggctttccat
gtgaatcaagttgttcttcaagacccccggtatttaaagaaattctctgaacaggagcct
cctctagagggtgagataattctgcaacccagagagggccaaactgtgattccagacttg
gaaaaggatgacatgatttttcgtaaagtcctctctcaaaaaaaagaggtgcctttatca
ggtgctcctgacaagtatcacccagcactgtttcctgatccatggagtcttccagaagag
atccggtccaaatttctatgtttacttgaaaaaaacgcaataccagaggaaaggaagagc
aacggcagagtgctgtcaccatctttacagcataagaaggatgatatgctgacccgcaag
attgaatcttggaaagtgggaagcaatgtccagccagtaaattttatcccaggtccatgc
agtgaagaagactggaagaagtgggaagcaatcagggaggccagcaaagttagacacaag
aaacggcagatggtggagagactgtttcaaaagctttctgatgagcaagggagtaaatct
ttgaatgatgtcagtgcagaggagctgcagacaatgcgcaaaatccgttatgaagagctt
caaaagataaaagaacagttacaagaacaagatctaaagtggcaagaagatctagcaaaa
tggaagagtcgtagaaagagctacacttcagaattgcaaaagaaaaaagaagagagagaa
gaaattgaaaggagagcttctgaggtatctggaaggagtaccaagtcactgaaagaaatg
cagcaggagaggcaagagagagatcaagactcctatgagcagcagaaacaggaacacaac
tgggcatattccctgaatgatgatgtgttcagtgaagaaaaagcaccttccacagtggca
aaagattggtcagcagccaaagattaccgtttggaagaagatacttcctacagcactaag
gacagcaaaagtgtatatgccacccagccacccaaggagaacctgtcggagagctcggct
gctcgagaagctcctgcgccgccggagagcctggcggaggagcgggagcagagcccagct
cttttgtccactcgctactcagtgaatgctcaaactgggtcagctcaggtttcagcttct
ctcccaagaacttaccagaaaactgatacctccaggttaacatctgtggttacaccaaga
ccttttggtgtccactcaagaggaatctcgtcacttccacggtcgttcacgatggatgat
gctcagaaatacaatggagaagtagaaaaagctaaaagaactcaaactttgttcaccagc
atttccttttcacaaccagactctgcacaccctctctccactggtgcattcagaagcaga
ggtgaggaggaagaggaggaaaaaggtgttcagtcaacacctcctcctagtttgccatta
cctttaaagttccaagaccaagattctggaagcagtattcctaagccagactatggcatt
cctcctgattctctttcacttgcatcttctgcagaaactgcgagtccaacagagcctaag
gattcaaaatccatggaacagtacagtgaaatgagaatcagtataaaccagagacctggc
cacagtcgcagctttgggtttacaacaaattggagttcttcaggagccattgtacagaca
gttgaagaaggcagccctgcggcactttgtcaactgcatgtagatgatgagatcattgct
gtcaacggcacaaaggtttctcatatggactacagtcagtgggaagaggccatcagcaga
gcactagaaactggaaacctggtcatggatgtcagacgatatggaaagaatgactggggc
aaagacctgccttccctgccacatgtaaggcataaaatcctcaatctcaccagtatggct
accaacattataggtacatctgaaaataaatggattgatgcaacttcaggagaaaaagtt
tcaaatgtttccaccatatccacaaaaagagatttctccagcagccttcaaagttctggt
acagaaacaaaactgataaacggaatgcaaggagatcttggctctaatgaacaaagagca
tctgaacctatttctttgaaaaacttaaaaagacggtcacaattttttgaacaaggaggc
ccagagcctgcaatgcctgatctcccagtcccatccatcagcgctcccagtcgtcgggtt
tgggatcaagaggaagagcgaaaacgacaggaaaaatggcaaaaagagcaggaccgttta
ttgcaggagaaataccaacgagagcaagagaaactgagggaagaatggctacgagctaag
caagaagcagaaaaagagagctccaagtattttgatgaggagcagactgttctaacccta
aatacaacatccgtcacttctcaggctccacctgtgtccagctggagagcaagccctgaa
gcaaatactccagaggagccagaaggagatggaggaaatgagctggcagcaggcttactg
catgaggaagaaggaaggagaaggcttcaggaggaagggaggatccaggaagaagcaacc
cggcattttgagcaagaacgggaacaagagctggagcttgagagacgacgtaaagagagg
gagcagcaatatgctgaggagcagaggcgacaggcagagatggaggagcagaggcagcag
gcagaaaggcagagggaggtgtcagtggaggtgcctcagtaccaaagacattatgagcgc
tatgaagtatctaaaacaatagaggatcgagctggccatcctctcattgacaggcattat
gagcgttatgaagtttctaaaaccattgaggagcaacctggccagtcatttgctgacagg
aataagtcaaaatcaactacagaactgaatgaattcaacacaatcagaaatggtacccag
agcaagtattcagaacggtcctggaacatgggtgactcgcagaagaagtctcagaaggag
caaaacctgtctgcagcagagttggagagacagcaaatccttcaggaaatgagaaagaaa
acatccctgcacacggacagcagctggattaggcagcgcagttcgagtatccataaggag
cccattagtctgtacagcagtagtatgaggagaggggagtctttggacaatcttgattct
ccaagaatgagctcgtggaggcaccactcatggctgaaccagtctgcatcctcttcatct
ctgtcttctagtcaagattttagtcgcccagtgtccacttcaaaccgggcctacatgtgc
actccttcctccagcaaagcacctcctgtggccacctctgtgagagccccctccatgtcc
cagacggctccccaggctcagtctcccctctctacttcccagtcagggtcccagacacgc
agcaggtcagtcagtgggaagaaaatctgttcatactgtaataacattctgggcaaagga
gcagccatgatcattgaatctcttggtctttgttatcatttacattgctttaagtgtgtt
gcctgtggatgtgacctcggtggatcccgctctggagctgaagtcaggatccgaaacaac
aaactcttctgcaacgactgctatatcagatttaaaactggacaaccaacctccatgtga
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integrated database retrieval system
