Aphelocoma coerulescens (scrub jay): 138107763
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Entry
138107763 CDS
T10543
Symbol
NRXN1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
138107763 (NRXN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138107763 (NRXN1)
Membrane trafficking [BR:
acoe04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
138107763 (NRXN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
138107763
NCBI-ProteinID:
XP_068865496
LinkDB
All DBs
Position
3:complement(20873272..21555244)
Genome browser
AA seq
1493 aa
AA seq
DB search
MGAVLVRRGGCLLLWLALLLGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFNMKTR
SSSGLVLYFDDEGFCDFLELILTQGGRLQLSFSIFCAEPATLLSDTAVNDNLWHAVVIRR
HFKNTTLIIDRAEAKWVEVKSKRRDMTVFSGLFLGGLPPELRSATLKLTLSSVKDREPFK
GWITDVRVNYTQASPLESQEVRLDDEQSRLCARDDVCLNGGVCSVLNDQAVCDCSQTGFR
GKDCSEGLAHLMMGDQGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLM
LHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSG
IGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNF
MGCLKEVVYKNNDVRLELSRLAKQGDAKMKIHGVVAFKCENVATLDPITFETPESFISLP
KWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMVKVDFFAIEMLDGHLYLLL
DMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDDLY
LGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPSCSR
ETAKPCLSNPCKNNGVCRDGWNRYVCDCSGTGYLGRSCEREATILSYDGSMFMKIQLPVV
MHTEAEDVSLRFRSQRAYGILMATTSRESADTLRLELDAGRVKLTVNLDCIRINCNSSKG
PETLFAGYNLNDNEWHTVRVVRRGKGLKLMVDDQQAVTGQMAGDHTRLEFHNIETGIITE
RRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKTKAS
YVALATLQAYTSMHLFFQFKTTSLDGLILFNSGDGNDFIVVELVKGYLHYVFDLGNGANL
IKGSSNKPLNDNQWHNVMISRDTNNLHTVKIDTKITTQSTAGARNLDLKSDLYIGGVAKE
MFKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCAN
QGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYTWPPNDRPSTRADRLAI
GFSTVQKEAVLVRVDSSTGLGDYLELHIHQGKIGVKFNVGTDDIAIEEMNAIINDGKYHV
VRFTRSGGNATLQVDNWPVIERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKGRQLT
IFNSQATIKIGGKERGHPFQGQLSGLYYNGLKVLNMAAENEANIVIEGNVRLVGEVPSSM
TTESTATAMQSEMSTSVMETTTTLATSTARRGKAPTKEPIGQSSDDLLVASAECPSDDED
IDPCEPSSGGLANPTRAGGGREYPGSSEVIRESSSTTGMVVGIVAAAALCILILLYAMYK
YRNRDEGSYHVDESRNYISNSAQSNGAVIKEKQPNSAKSSNKNKKNKDKEYYV
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggtgctggtgcggcgcgggggctgcctgctgctctggctggccctactgctg
ggctgctgggctgagctgggcagcgggctggagttcccgggtgcggagggccagtggacc
cgcttccccaagtggaacgcctgctgcgagagcgaaatgagcttcaacatgaagacgcgc
agctccagcgggctggtgctctactttgatgatgagggcttctgtgacttcctggagctc
atcctcacccagggagggcggctacagctcagcttctccatcttctgcgccgagcccgcc
accctgctctcggacacggcggtcaacgacaacctctggcacgctgttgtcatccgccgc
cacttcaagaacacgacactgatcattgaccgagccgaggccaagtgggtggaggtgaag
tccaaacggcgggacatgactgtcttcagcgggctcttcttaggggggctcccgccggag
ctgcggtcggcgacgctaaagctgacactctcctccgtcaaggaccgggagcccttcaag
ggctggataacagacgtgcgggtgaactacacgcaggcgtcgccgctggagagccaggag
gtgcggctggatgacgagcagagccggctgtgcgccagggacgacgtctgcctcaacggg
ggcgtctgctcggtgctcaacgaccaggccgtctgcgactgctcccaaacgggcttccga
gggaaggactgcagtgaaggtctggcgcacctgatgatgggcgaccaaggaaaagaagaa
tatattgcgacattcaagggatcagaatacttctgctatgatttatctcagaaccccata
cagagtagcagtgatgaaataactctgtcgtttaaaacacttcagaggaacggactgatg
cttcacacaggaaaatcggctgattatgtcaatcttgcactgaaaaatggagctgtctcc
ttggtcattaatttgggctcaggggcctttgaagcgctggtggaacctgtgaatgggaaa
tttaatgacaatgcctggcatgatgtgaaagtaaccaggaatctgcgtcagcactcaggc
attggacacgctatggtaaacaaactacattgttcggtgacaatatcagtggatggaatt
ctgaccacaacgggatacacgcaagaagactacaccatgctgggctctgatgactttttc
tatgttggaggcagtcctagcacagcagacctcccggggtcaccagtcagtaacaacttt
atgggctgtctcaaagaggttgtatataaaaataacgatgtcaggttggagctgtctcga
cttgccaagcaaggggatgctaaaatgaagattcatggggttgtagcatttaaatgtgag
aatgttgcaaccttagatccaatcacatttgaaacaccagagtctttcatctctctgcca
aaatggaatgccaagaaaacaggctcaatatcatttgactttcgtacaactgagccaaat
ggcctgattcttttcagtcacgggaaaccaaggcaccaaaaagatgccaaacatccacag
atggtgaaggttgacttttttgccattgagatgcttgatggccacctctacctactgtta
gacatgggatcaggtactataaaaataaaagccttgcagaagaaggtgaatgatggtgaa
tggtaccatgtggattttcagcgggatgggcggtcagggacgatatctgtgaacacgtta
cgtactccatatactgcaccaggggaaagtgaaatccttgacttggatgatgacttgtat
cttggaggcttaccagaaaataaagcaggcctggtcttcccaacagaggtgtggacagcg
ctcctcaattatggatacgtcggctgcattagagatttatttattgatggtcaaagcaaa
gatattcgacagatggctgaaattcaaagcacagctggagtaaaaccttcatgctcaaga
gaaactgcaaaaccttgccttagcaacccctgtaaaaacaatggtgtgtgcagggatggg
tggaacagatatgtgtgtgattgctctggcacggggtaccttggcagatcgtgtgaaaga
gaggcaacaattttaagctatgatggaagtatgtttatgaaaatacagcttcctgttgtg
atgcacacagaggccgaagatgtttctttaaggttcaggtctcagcgagcttatggcatt
ttaatggcaacaacttccagggaatctgcagacacccttcggttagagctggatgcagga
cgagttaagctaacggtcaacctagactgtatcaggattaactgtaattccagcaaaggc
ccagaaaccctttttgctggctataacctcaatgataatgagtggcacacagtgcgtgtg
gtgcggcgaggaaaaggtttaaagttaatggtggatgaccagcaggccgtgacaggtcaa
atggctggcgatcacacacgactggaattccacaacatagaaacaggaataataacagaa
cggcgctacctgtcttctgtgccttctaattttattgggcatctgcagagtctcacattt
aatggcatggcatacattgacttgtgtaaaaatggagacatcgattattgtgagctaaat
gcaagatttgggttcaggaacatcatagcagaccctgtaacctttaaaacaaaagcaagt
tatgtggcactggccacgctacaagcatacacatctatgcacctttttttccagttcaaa
accacctccctggatggattgatactttttaacagtggcgatggaaatgatttcattgtg
gttgaattagtgaaagggtatttacactatgtgtttgacttgggaaatggtgccaacctc
atcaagggaagttctaataaacctctgaatgacaaccagtggcataatgtaatgatatca
agggataccaacaacctacacactgtaaagattgacactaaaatcacaacacagagcaca
gcaggagccaggaatttagatctcaaaagtgatttgtatattggaggagtggccaaagaa
atgttcaaatccttgcccaaactggtgcatgcaaaggagggattccaaggctgccttgca
tcagttgacttgaacggacggctccctgatctcatctcagatgctctcttctgcaatggg
caaatagaaagaggatgtgaaggccccagcacaacgtgccaagaggattcttgtgcaaac
cagggcgtgtgcttacagcagtgggatggattcagctgtgactgtagcatgacctccttt
agtggaccattatgcaatgacccggggacaacgtatatctttagcaaaggtggtggacaa
atcacttacacgtggcctcctaacgaccggccgagcactcgagccgacagactggcaata
gggtttagcactgtgcaaaaagaggctgtgctggtgcgagtggacagttctactggcctt
ggagattatttagagctgcatatccaccagggaaaaattggagttaaatttaatgttggg
acggatgacatcgccatcgaagagatgaacgccatcattaacgatgggaagtaccacgtg
gttcgcttcacaaggagtggtggcaatgccaccctacaggtggacaactggcccgtcatc
gagcgttacccagcaggaaacaatgataacgagcgcctggcgattgctagacagcgaatt
ccatatcgacttggtcgagtagttgatgaatggctactcgacaaagggcgtcagctcaca
atcttcaatagccaagcaaccataaaaattggaggcaaggaacgcggccaccctttccaa
ggccagctctctggtctttactacaatggcttgaaagttctgaatatggcggcagaaaac
gaggccaacatcgtgatagaaggaaatgtgagacttgttggtgaagtgccttcctctatg
acaaccgagtccacagccaccgcaatgcagtcggagatgtccacgtcagtcatggaaaca
accaccaccttggccacgagcaccgctagaagaggaaaggctccgaccaaagaacccatt
ggtcagagttcagatgacctcctggtggcctcggctgaatgtccgagcgatgacgaggac
atcgatccctgtgagccgagctcaggtgggttagcaaaccctaccagggcaggaggagga
agggagtaccccggctcgtccgaggtgatccgtgaatccagcagcacgacgggcatggtg
gttgggattgtggcggcggcggcgctgtgcatcctcatcctcctgtatgccatgtacaag
tacaggaatcgagacgaaggatcctaccacgtagatgagagtcgaaactacatcagtaac
tcagcacaatccaatggggctgtgatcaaggagaaacagcccaacagcgctaaaagttcc
aacaaaaacaagaaaaataaggataaggagtactatgtctga
DBGET
integrated database retrieval system
