Aphelocoma coerulescens (scrub jay): 138108087
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Entry
138108087 CDS
T10543
Symbol
TBP
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138108087 (TBP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138108087 (TBP)
03021 Transcription machinery [BR:
acoe03021
]
138108087 (TBP)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
138108087 (TBP)
Transcription machinery [BR:
acoe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138108087 (TBP)
RNA polymerase III system
TFIIIB
138108087 (TBP)
RNA polymerase I system
SL1/TIF-1B
138108087 (TBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
TFIIA
ANAPC_CDC26
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
138108087
NCBI-ProteinID:
XP_068866331
LinkDB
All DBs
Position
3:50355952..50365443
Genome browser
AA seq
305 aa
AA seq
DB search
MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPVQSTNSLSILEEQQRQQQ
QQQQQQAAQQSTSQQATQGTSGQTPQLFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATP
ASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIF
SSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLV
LTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKG
FRKTT
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaacaacagtttgccaccctacgctcaaggcttagcctcccctcagggtgca
atgactccaggaattccaatttttagcccgatgatgccatatggcacaggactgacaccg
cagcctgtccagagcaccaacagtctgtccatattggaggaacagcagcggcagcagcag
cagcagcagcagcagcaagcagcacagcaatccacatcacagcaagcaacacagggaaca
tctggtcaaaccccccagctcttccattcacagactcttaccacagcccctttaccagga
accacacctctgtacccctctccaatgactccaatgactccaataactcctgcaacacca
gcatcagagagctctggcatagtgccacaactacagaatattgtgtccacagtgaatctt
ggttgcaaacttgacctaaaaactattgcacttcgtgcccgaaatgctgaatataatccc
aagcgttttgctgctgttattatgagaataagagaaccacgtactactgcactgatattc
agctctggaaaaatggtgtgcacaggagcaaaaagtgaggagcaatccagactggcagca
aggaagtatgcaagagttgttcagaaactgggttttcctgcaaaatttttggattttaaa
attcagaatatggtgggcagctgtgatgtgaaatttcccatcagactggaaggattggta
cttacacaccagcagttcagcagctatgagccggaattgtttcctggcttaatctacaga
atgattaagccaagaattgttctgcttatttttgtttctggaaaagtggttttaactggc
gctaaagtacgagcagaaatctatgaagcatttgaaaacatctatcctattttaaaggga
ttcagaaagacaacgtaa
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integrated database retrieval system
