KEGG   Aphelocoma coerulescens (scrub jay): 138108098
Entry
138108098         CDS       T10543                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    138108098 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acoe03021]
    138108098 (TAF5L)
   03036 Chromosome and associated proteins [BR:acoe03036]
    138108098 (TAF5L)
Transcription machinery [BR:acoe03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     138108098 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     138108098 (TAF5L)
Chromosome and associated proteins [BR:acoe03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     138108098 (TAF5L)
    STAGA complex
     138108098 (TAF5L)
    TFTC complex
     138108098 (TAF5L)
    SAGA complex
     138108098 (TAF5L)
    SLIK complex
     138108098 (TAF5L)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_Gbeta Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd TFIID_NTD2 EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_Aladin ANAPC4_WD40 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_IFT140_1st NBCH_WD40 Tricorn_2nd Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_WDR19_1st WD40_RFWD3 PEP5_VPS11_N PROPPIN WD_LRWD1 Ge1_WD40 eIF2A Mala_s_1-like Nbas_N
Other DBs
NCBI-GeneID: 138108098
NCBI-ProteinID: XP_068866353
LinkDB
Position
3:51036669..51055496
AA seq 589 aa
MKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGCANVVSA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTMTIQDILSNLKLRAFLDNKYVIRLQEDSYNYLLRYLQ
SDNNNALCKVLTLHIHLDVQPAKRTDYQLYAGGSSSRNESNGLEPSDMPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRSR
KLKSEPHLVDVSRIRLACDILDEEEEEDDNAGTEMKILRGHCGPVYSTRFLSDSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCNAPADGSSSELVGVYTGQMNNVLSVQFMACNLLLVTGIAQENQEH
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgcgtacgcacagaacagattcagatggcagtgtcctgctacctcaagcgccgt
cagtatgtggactcggaaggtcccctaaaacaagggctgaggctgtgtcagactgctgaa
gagatggcagctaatctcacagttcaatctgagtctggttgtgccaacgttgtgtctgca
gctccctgcctggcagagccacagcaatatgaagtacagtttggacgattacgcaatttt
ctgacagattcagattctcagcacagccatgaagtgatgcctcttctatatcccctcttc
gtctacctccatttgaacatggtccagaatggcctaaaaagcacagtggacagtttttac
agccgcttccatggcatgttcttgcagaatgccagccagaaggatatcattgaacagttg
cagactaccatgactattcaagatatcctgtccaacttgaagctccgggcttttctggac
aacaagtatgtcattcgccttcaagaggacagctacaactaccttcttcgctacctccaa
agtgacaacaacaacgccctgtgcaaagtcctgaccttgcacattcacctggatgtgcag
cctgccaagaggactgactaccagctctatgctggtgggagctcctcacgcaacgagagc
aatggcctggagcccagcgacatgccggcttccattctgcagaatgaggcagcgctggat
ttactgcaggacagcattaaacgtgtcaaggacgggcccccttccttaaccaccatctgt
ttctatgccttctataacacggagcagttgctgaacactgcagagatttcaccaaatagc
aagctgctcgctgctgggttcgataattcatgtgtgaagctgtggagcctgcgctccagg
aaattgaaatctgagccccaccttgttgatgtgtcccgcatccgtttggcttgtgacatc
ctggatgaggaggaggaagaggatgacaacgcaggcacagaaatgaagattctgagagga
cactgtggacctgtgtatagcacgaggtttctttcagacagttcaggactcttatcttgt
tctgaggacatgtccatcagatactgggacctcggaagttttacaaacactgtgttgtac
caaggacatgcctatcctgtctgggatttggatattagcccctgcagcctgtattttgcc
agcggttcccacgatcgcactgcaaggctctggtcgtttgatcggacgtacccgctgcga
atatacgcaggccatttggcagacgtggactgtgtcaagttccaccccaattccaactac
ttagcaacaggctccacagacaaaaccgtgcgcctgtggagcactcagcagggcaactcc
gtgcggcttttcaccggccaccggggccctgtgctggcgctcgcgttttctcccaacggg
aagtacctggcatcggcaggtgaagaccagcggctgaagctgtgggacttggcatcagga
actctttacaaagaactgagggggcacacagacaacataaccagccttacttttagccct
gacagtagtttaattgcttcagcgtcgatggacaattcagttcgggtctgggacattcgg
aacacttactgcaacgcccctgcggatgggtcttccagtgaactggttggtgtatatact
ggacagatgaataatgtactgagcgtacagtttatggcctgtaatcttcttctagtgact
ggaattgcacaagaaaatcaggaacattaa

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