Aphelocoma coerulescens (scrub jay): 138108176
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Entry
138108176 CDS
T10543
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoe04121
]
138108176 (SHPRH)
Enzymes [BR:
acoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138108176 (SHPRH)
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138108176 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
PEP-utilisers_N
TPR_12
TPR_10
TPR_2
Motif
Other DBs
NCBI-GeneID:
138108176
NCBI-ProteinID:
XP_068866535
LinkDB
All DBs
Position
3:58497764..58549330
Genome browser
AA seq
1695 aa
AA seq
DB search
MSSRRKRAPPSKVDEEKKKKLCWNMHEDRRNEMVTLDDELTNEDHIPVPSTSASFIVIND
DSIDEDLVQKEGSGSKSVKFLTVNDEEDSYSILTPVSVQLNIIVLPYHADRSWEALLGEF
ALHLPSEQILADEFRDRSFTLMRGDSDDELQVCVHERSEEEYSNETKEYLGTYEQRILVK
ATLSGEILEGLRWLQKKKIIGLYQRPGEAQALKVGIYLLEAGLSKPEFLSDGGGRPKKAN
QMIQKLMEKFYSFLIPDELEEDGEESDMELERQNIEELYDFVRHTHQQDIQLLRKDVQHP
ALIPILRPYQSEAVNWMLHRENHTSAPSSENTLHFLWREVITLDGVKIYYNPFTGCIIRE
YPTAGPQWPGGILADEMGLGKTVEVLALILNHTGPDIKQDDLTLPEGKLVNFFVPPQPLE
GSKKKKTKEMEPKLKEKIQYPSLRVMILAAVKEMNVKKGASIIAIFKYISSIYRYDTQRN
RRLLKRTLEKLIAEQVVEQVKGHGLAGSFKLGKNYKEQKKRERTKEQGTRTSENIQKKQL
IDAKTQTKESKNSDVTSENVFKTASHENIAMEEHDYCTTSKNNRKSEADHENSVEEKNVK
PETVVPKSPDLHSSLLVSKDVSSHPDVDVSKTTADVQQEIPKVQSSHSQEHAGNSGQHTS
SVFPFNTSEYRFECICGELGLADYKARVQCLKCYLWQHAECVNYKEENLKSRPFYCPHCL
VAMKPVPTGATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKHGFLQPHMLAEQEV
VITTYDVLRTELNYVDIPHSNSEDGRRFRNQKRYMAIPSPLVAVEWWRICLDEAQMVECT
TAKAAEMALRLSGINRWCVSGTPVQRGLEDLYGLVLFLGVDPYWVKHWWDQLLYRPYCRK
NPRPLYSLIAKIMWRSAKKDVIDQIQIPPQTENIHWLHFSPVERHFYHRQHEVCCQDALA
KLRKISDWTLKLSSLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLAS
LQKKCRTECEEAHRQLVCALNGLAGIHIIKGEYALAVELYREVLRSSEEHKEKLKTDSLQ
RLHSTHNLMELLAKHPGIPPTLRDSRLAEEAEQLRQHYMSKSNAEVAEAHQALQPVLQTI
RELQRKIHSGSPWWLDVIQTAIQYAIDEELVQRVQNEITCNYKQQTSKLSMAEKFRDCRG
LQFLLTTQLDEVKKFQKIVREAVKNLEGPPSKQVIEAATICHLRPVRLPLNNCVFCKADE
LFTEYESKLFMHSVKGQMAIFEEMIEDQEGLVDDRLPTTSRGLWATSETERALKALLSFA
KAHRMDARLTEEGSIFLELFEAWKKEYKLLHEYWMVLRDHVSAIDELAMATERLRVRHPD
EPKPNPPVLHIIEPHEVEQNRVKLLNDKAVAKSQLQKKLGQLLYLTNLEKSQDKTTGGVN
PEPCPICARQLGRQWAVLTCGHCFCNECIAIIIQQYSVGTRRSSIKCAICRQTTSHKEIS
YVFTAEAANQEDDIPVKGSHSTKVEAVVRTLKRIQFKDPGAKSLVFSTWQDVLDIISKAL
YDNNMIFSQINGISKFQENLSAFKYDPNINILLLPLHTGSNGLNIIEATHVLLVEPILNP
AHELQAIGRVHRIGQTKSTIVHRFLIKATIEERMQTMLKTVDRSHTSSSMKQSEASVLTV
ADLADLFTEETEELE
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcgtcgaaaacgtgcacctccatccaaagtggatgaggagaagaagaaaaag
ctctgctggaatatgcatgaagaccggagaaatgagatggtgacattagatgatgaacta
acgaatgaggaccatattccagttccaagcacttctgcatctttcattgttataaacgat
gatagcattgatgaagatcttgtacagaaagaaggcagtggctcaaaatctgtcaagttt
ttgacagttaatgatgaagaagactcttattccatcttgactcctgtgtctgtacagcta
aatattatagtcttgccataccatgcagataggtcctgggaggctttgttgggagaattt
gctcttcacctgccttctgagcaaattctagctgatgaattccgtgacaggagctttact
ttaatgagaggagactctgatgatgagctgcaggtctgtgttcatgaaagaagtgaagaa
gagtacagtaatgaaacaaaagaatacctgggcacttacgaacaacgtattttggtgaaa
gcaactttaagtggtgaaatattggaaggcttgagatggttgcaaaagaaaaagataatt
ggactttatcaaagacctggagaggctcaggctttaaaggttgggatttaccttcttgaa
gctgggctaagtaaacctgagtttctcagtgacggaggtggaagacccaaaaaagctaat
cagatgattcaaaaactcatggaaaagttctacagttttttaattccagatgagctggag
gaagatggggaagaatctgacatggaactagagcgacaaaatattgaagagctttatgac
tttgtaaggcacactcatcagcaggatatccaattactgagaaaggacgtgcaacatcct
gcactaattcccattctgaggccataccaaagtgaggctgtcaattggatgcttcacaga
gagaaccacacaagtgctccaagtagtgaaaacacgctgcacttcttatggcgggaggtg
atcactctggatggagtgaaaatctactataatccatttactggctgtattatccgtgaa
tatccaactgctggaccccagtggcctggaggtattttggcagatgagatgggtcttgga
aaaacagtagaagtgttggctcttattctgaatcataccggaccagacattaaacaagat
gatctgacattacctgagggtaagcttgtgaacttctttgttccacctcaacctttagag
ggaagtaaaaagaaaaaaacaaaggaaatggagcctaaattaaaggaaaaaatacagtat
cccagcttaagagtaatgatattagcagctgtaaaggaaatgaatgtgaagaaaggagca
tccattattgcaatatttaagtacatcagttctatatataggtacgacacacagagaaat
agacggcttctcaaaagaactctagaaaagctaattgcagaacaggtggtagagcaagtt
aaaggacatggtctggctgggtctttcaagctgggaaagaattacaaggaacagaagaag
cgagaaagaaccaaagagcagggaacaaggacttcagaaaacattcagaagaaacaattg
attgatgctaaaactcaaaccaaagaatcaaaaaacagtgatgtaacatctgaaaatgtc
tttaaaactgcttcacatgagaatattgccatggaagaacatgattattgtacaactagt
aaaaataacaggaaatctgaagcagatcatgagaactctgtagaagagaaaaatgttaag
ccggaaactgtggtcccaaagtctcctgatttgcacagcagcctccttgtctccaaagac
gtgagcagccatcctgatgttgatgtttctaaaactacagctgatgtccagcaggaaatc
ccaaaagtccagtcctcacattcccaagaacatgctggcaatagcggacaacacaccagt
tctgtatttccatttaatacctctgaatatcgttttgaatgcatctgtggtgagctcgga
ttggctgactacaaagctcgtgtgcagtgcctgaaatgttacctgtggcagcatgcagaa
tgtgtaaactacaaagaggaaaacctgaagagcaggcccttctactgtccccattgcctt
gtggcaatgaagccagttcccacaggagcgactctgataatttctccaagttctatttgt
caccagtgggtagatgagatcaacaggcatgtaagatcatcatctcttcgagttctggtg
tatcaaggtgtgaagaagcatggctttttgcagccccacatgctggcagagcaggaggtg
gttatcaccacatacgacgtcctgcgcaccgaactgaactatgtagacattccccacagt
aacagtgaggatgggcgccgcttcaggaaccagaagcgctacatggccataccaagcccc
ttagtagcagtggagtggtggaggatctgccttgatgaagcacaaatggttgaatgcact
actgcaaaggctgctgaaatggcactccgtttgagtggaatcaatcgctggtgtgtcagt
ggcactcctgtgcagcgaggattagaagatttgtatggattagtcctttttcttggagtt
gacccttactgggtcaaacattggtgggaccaacttttgtatcgaccttattgtaggaaa
aatccccggcctctctacagtctaattgcgaagataatgtggagatcagcaaagaaggat
gtgattgaccaaattcaaatcccccctcagacagaaaatatacactggcttcacttctct
cctgtggagagacacttctatcatcgccagcatgaggtgtgctgccaggatgcattggca
aaactcaggaagatttcggactggactctcaagcttagcagcctagatagaaggactgtg
acttctattctgtaccctttgctacggctgaggcaggcctgctgtcacccacaagctgtt
cggggagagttcttgccactacagaaaagcactatgaccatggaggagctgttggcatct
ctgcagaagaaatgtcgaacggagtgtgaggaagctcaccgacagctggtgtgtgctctt
aatggcttagctggtatccatatcattaaaggagaatatgcactggctgtggagctgtac
agagaagtattaagatcatctgaagagcacaaagaaaagctcaaaacagattccttgcaa
agacttcattctacacacaatttgatggaattgttggcaaagcatccaggaattccccca
acattgcgtgatagccgacttgcagaagaggcagaacaacttcgacaacattatatgagt
aaatccaatgcagaagttgcggaagcacatcaggccttacagccagtccttcaaaccatt
cgggagcttcaaagaaagatacattcaggttctccttggtggttggatgtcatccagaca
gcaatacagtatgccatcgatgaggagcttgttcagcgtgtgcaaaatgaaataacctgc
aactacaaacagcagacgagtaaactctccatggcagagaaattccgtgactgcagaggc
cttcaattcctacttacaactcagctggatgaagtgaagaagttccagaagattgtaaga
gaagcagtgaaaaacttagaagggcctccttctaagcaggtcattgaggctgccactatc
tgccatttgcgacctgttagacttccacttaacaactgtgtcttttgtaaggctgatgaa
ctgttcacagaatatgagtcaaagctctttatgcatagtgttaaaggccaaatggcaatc
tttgaggagatgatagaagaccaagaagggcttgtcgatgatcgtttgcccaccacaagc
agagggctctgggcgaccagtgaaacggaacgtgccttgaaagctcttctctcctttgcc
aaagctcatcgaatggatgctaggctaactgaagaaggaagcatattcctggagctcttt
gaagcatggaaaaaggaatataagttacttcatgagtattggatggtccttagggatcac
gtgtctgctattgatgaactggcaatggcgacagaacgactgagagtgcgtcatcctgat
gagccaaaaccaaatccacctgttctccacattatagaaccacatgaggtagagcaaaat
cgagttaaacttctgaatgacaaggcagttgccaaatcacagcttcaaaagaaattagga
caacttctgtacctcactaatctggagaaatctcaggataaaactactggaggagtcaac
ccagaaccatgtccaatctgtgcacgccaactgggtagacagtgggcagtgctgacgtgt
ggacactgtttctgtaatgagtgcatagcaatcatcatccagcaatacagcgttggcacc
cgccgcagctcaattaaatgtgccatttgcaggcagacaacatctcacaaagaaatatct
tatgtcttcactgcagaagctgcaaatcaggaggatgatattcctgtcaagggaagtcac
tccaccaaagtggaagctgtggtccgaacactgaagagaattcaatttaaagatccaggg
gctaaatccttagttttctcaacgtggcaagatgtgttggatataatttcaaaagctttg
tatgacaacaacatgattttttctcagatcaatggaattagtaaatttcaggaaaacctg
tctgcatttaaatatgatcccaacatcaatattttgctgctgcctcttcacactggttcc
aatggactaaacatcatcgaagcaactcatgttctactcgtggagcccattctgaatccg
gcacatgagctacaggctattggcagagtacatcgtattggccaaacaaaatctacaatt
gttcatagattcctgataaaagcaacaatagaagagagaatgcagactatgctgaaaact
gtagatagaagccacacgagctcttccatgaaacagtcggaagcctcagtgttgacagtg
gcagatttggctgacctttttacagaggaaactgaagaacttgagtag
DBGET
integrated database retrieval system
