Aphelocoma coerulescens (scrub jay): 138108288
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Entry
138108288 CDS
T10543
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
138108288 (HBS1L)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138108288
NCBI-ProteinID:
XP_068866821
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Position
3:67766001..67825657
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AA seq
713 aa
AA seq
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MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATFAEPLEEEYG
YEGTDAAADSFTSTHQLTEVDRARLNSCLDQMREVLAESIPEQAMVQAVLDTKFDVQKAL
DLVLSQGSKQNVKTKNKDAVILAKTTKGKPRDSQSTRMESEIVPKITKMTVSGKKQSTGF
EVPWYPAINLLSLSLTLVSKKLNYVIRDTLAIAEENGHTNTPQKGLLPEDARVASGVLEA
VSKSTLSPQVVQVSEEQNMVPSPAKKSSKVKPQIDVKAELEKRQGGKQLLNLVVIGHVDA
GKSTLMGHLLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMT
KFETPTKIITLMDAPGHKDFIPNMITGAAQADVAILVVDASRGEFEAGFETGGQTREHGL
LVRSLGVTQLAVAVNKMDQVNWQQERFQEITSKLGQFLKQAGFKESDVAYVPTSGLGGEN
LVTRGQSSDLTQWYKGKCLLEQIDSFKPPQRSVDKPFRLCVADVFKDQGSGFCVTGKIEA
GYIQVGERLLAMPPNETCTAKGITLHDEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDP
KEPIKVCTRFRARVLIFNIEVPITKGFPVLLHYQTVSEPATITRLLSVLHKSTGEVTKKK
PKFLAKGQNALIELQTQRPVALELYKDFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcacaggaacgtccgaggatataactacgacgaagactttgaagatgatgat
gtgtatggccaatcagtagaagatgattattgcatttctccttcaacagcagctcaattt
atttactccagaagagacaaaccagccacatttgctgagccattagaagaagaatatggc
tatgaaggtaccgatgctgctgctgatagttttacatccactcatcagttgactgaagtt
gatagagcccgtcttaattcatgccttgatcaaatgagagaagttttggcagagtccata
ccagaacaagcaatggtgcaagcagtactggatactaaatttgatgtacaaaaggctttg
gatcttgtgctttcacaaggcagtaagcaaaatgtgaagaccaagaataaggatgctgtg
attttagcaaagactacaaaaggaaaaccaagggattcccagtcaaccagaatggaatct
gaaattgtgccaaaaattaccaaaatgacagtgtctggaaagaaacaatccacgggattt
gaagttccatggtacccagcaataaacttgctctccctttccctgacactggtcagcaag
aagctgaattatgttattagagatactcttgcgattgctgaggaaaatggccacactaac
acacctcagaaaggactgttacctgaagacgccagagtagcttctggggtacttgaggct
gtctcaaaatctactctttcacctcaagtagtgcaggtttcagaagagcagaatatggtg
cctagtccagcaaaaaagtcaagcaaggtaaaaccacaaatagatgtgaaagcagagttg
gagaagagacaaggaggaaagcaactgctgaatttggtggtaataggacatgttgatgca
ggcaaaagtactttaatgggtcatttgctctaccttttgggaaatgtgaacaaaagaact
atgcacaaatacgaacaggaatctaaaaaggccggtaaagcttcatttgcctatgcatgg
gtcttggatgaaactggtgaagaaagagaaaggggagtgacaatggatgtgggtatgacc
aaattcgagacaccgactaaaataattacgctgatggatgctccaggccacaaagacttc
attccaaatatgatcacaggagctgcacaggctgatgtggcaatattggttgtggatgcc
agcagaggagagtttgaggcaggatttgagacaggtggacaaactcgagaacatggatta
ttagtacgctctcttggcgtgacgcagctggctgttgcagtcaataaaatggaccaggtt
aattggcaacaggaaagatttcaggaaattacaagtaagcttggccaatttcttaagcaa
gctggctttaaggaatcagatgtagcttatgttccaacaagtggccttggtggtgaaaat
ctagtcacaaggggtcagtcaagtgacctcacacaatggtataaaggaaagtgtttgtta
gagcaaattgattctttcaaaccaccacagagatcagtggataaaccatttagactgtgt
gttgctgatgtttttaaagaccaagggtcaggattttgtgtgactggtaaaatagaagca
ggctatattcaagttggagaacgacttctggcaatgcctcccaatgaaacttgcactgca
aaaggaatcacactgcacgatgaaccagttgattgggctgctgcaggagatcacgttagt
ctcactttgaccggcatggatatcatcaaaatcaatgtgggctgtgtattttgtgatccc
aaggaacccattaaagtttgcactcggttcagagctcgagttctcatcttcaatattgag
gttccaatcactaaaggatttcctgtgcttttacactatcaaacagtaagtgaacctgct
actattacaaggctgttgagtgtcctgcacaaaagcactggtgaagtgacaaagaaaaaa
cctaagttcttggctaaaggacagaatgctctaatagaactacaaactcaaagacctgtt
gctttagagttgtacaaagattttaaagagctggggaggtttatgttacgctacagtggt
tccactattgctgcaggagttgttacagagattaaagaatga
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