Aphelocoma coerulescens (scrub jay): 138108668
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Entry
138108668 CDS
T10543
Symbol
SMC6
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
DNA repair and recombination proteins [BR:
acoe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
138108668 (SMC6)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138108668
NCBI-ProteinID:
XP_068867724
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Position
3:complement(114452130..114492290)
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AA seq
1095 aa
AA seq
DB search
MGKRKEESVSSRGSQKKQRKEYTDILGDEPNEEETLEFSANSSASSQSPDGEVGIIESIQ
LKNFMCHSNLGPFQFGSNLNFVIGTNGSGKSSVLTALIVGLGGKATATNRGSSLKMFIQK
GETSADISITLRNQGRDAFKPESYGASITVNQHINQDGSRTYKLKSKCGAIISSKKEELI
GILDHFNIQVDNPVSVLTQEMSKQFLQTKNEGDKYKFFMKATQLEQMKEDYSFIGKTKKN
TRVQIEQGEERLEELKQVYLEKKEIFKSIAFVNDMQSRLKDLKHQMAWAVVSEMEKEIEL
LKEGVKAEEGNTEFLQKVEEWQVKVNEAEKKYKAIQDKLITVSEEAQALHPQCISLKAEV
QAKRKAVNETEIVYNRSKTELKRLGKDNEQLCKRIEELKSCANQASEPEKLERQRRIAYL
REQLKAFHDEEIMIDQQVDQFQQAISKCREEHSRLRRENSDVQQALDAKQKQLRDLKDSK
TNTLKRFGPHIPAFLEAIEVAHKQGRFKKKPLGPLGALIHPKDPELILAIESCLKGLLQA
FCCDNHSDERTLQFLMSKYFARGHRPQIIVNKFQNKIYDTSQRAVRHPEFPSVLTALEID
DPVVANCLIDMRGIETILLIKNSRKAREVMQCNQPPKNCKEAFTAEGDQVFERRYYSSSF
VRPRFLSQDVEAEISHLDREIENKRAQLTASQQRLYSIENEIRQNEDHLYGHRRHQKQLQ
IKVRTANAEIADLENMEEHQSADVHILQDEVEENKSRMESVKQDMQLQSRKMEELENNLQ
AAEKQLEEVKEKIHQVEEIAGPIKAELNQAESEVENSKRRLQHYEDKQREHVACVNKHKD
LLVAKRNELEEKMAKARQIFSERIMVTRTVKSLDAEMNRLREKINSESSHRGNREEIIQQ
FRYARERYEDASNKVKNLKRFIAVLDEVMTERLKVYRQFLRSLSMQCKLHFEHLLRVRGC
SGNIIFDHKNETLSITVQPREEEKASRSDLRSLSGGERSFSTVCFILSLWNISESPFRCM
DEFDVYMDMVNRRIAIDMILERADFQRHRQFILFTPLTMSSLPMSPHIRILRMPDPPRDQ
RTLNFQNRNNRDEDQ
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagagaaaggaagaaagtgtttcaagtcgtggatcccagaaaaagcagagaaaa
gaatacacagatatacttggtgatgagcctaacgaagaagaaactttagagttctcagct
aacagtagtgcctcttcacagtcgcctgatggtgaagttgggataattgaaagtatccag
ctgaagaacttcatgtgccattcaaatttggggccgtttcagtttggatcaaatctcaat
tttgttattggaaccaatggaagtggaaaaagttctgtattaactgcactaattgttgga
cttggtggaaaagccactgcaactaacagaggctcctcattaaaaatgtttattcaaaaa
ggagagacttctgcagatatttccataactttgcggaaccaaggcagagatgcatttaaa
ccagaatcatacggtgcctctattactgtgaatcagcacattaatcaggatggaagcaga
acttacaaactgaaaagcaaatgtggggccataatttcttcaaagaaagaggaactcata
ggaatactggatcactttaatatacaggtagataatcctgtgtctgttttaacccaagag
atgagtaaacagtttttacagactaaaaatgaaggcgacaagtacaagttttttatgaag
gcaactcagctggaacaaatgaaagaagattattcatttattgggaaaactaaaaaaaat
acccgtgttcagatagaacaaggggaagagcgtcttgaagaacttaagcaggtttatttg
gaaaagaaggaaattttcaaaagcattgcatttgtgaatgacatgcaaagtcgtctcaaa
gatttgaaacatcagatggcgtgggcagtggtgagtgagatggaaaaagaaatagagctg
cttaaagaaggtgtcaaagctgaagaaggaaatacagagttccttcagaaggtagaagaa
tggcaggtaaaagtgaatgaagcagaaaaaaagtacaaagcaatacaagacaaattgata
accgtaagtgaagaagcacaagcccttcatcctcagtgtatttctttgaaagctgaagtg
caggcaaaaagaaaagcagtcaatgaaactgagatagtttataatcgttccaaaacagag
ttgaaacgtctgggaaaagacaatgaacagctatgtaaacgaattgaagaactgaaaagc
tgtgctaatcaagcttcagaacctgaaaaattggaaagacaaaggagaattgcatactta
agggaacagttaaaggcattccatgatgaagaaataatgattgatcagcaggtggatcag
tttcagcaggctatatctaagtgtagggaagaacattctagactcaggagagaaaacagt
gatgtgcaacaagcactggatgccaagcagaaacagctgagagacctgaaagacagtaaa
acaaatactttgaaaagatttggaccccatataccagcatttcttgaagcaattgaagtg
gcccataagcaaggacgctttaaaaagaaacctcttggacctttaggtgctttgattcat
ccaaaagatcctgaactgatcttggctatcgaatcctgtttaaaaggcctacttcaagca
ttttgctgtgataatcatagtgatgaaagaactcttcagtttctgatgtcaaaatatttt
gcccgtggacatagacctcaaataattgtaaataaatttcagaataaaatttatgatact
agtcagagagctgttcgtcatccagaattcccatcagttctgacagcattggaaatagat
gatccagtggttgccaattgtttgatcgatatgaggggtatagaaacaatcctgctgatt
aaaaatagccgcaaggctcgtgaagtcatgcagtgcaatcagcccccaaaaaactgcaaa
gaagctttcactgctgaaggtgatcaagtgtttgaaagacggtattactcttccagtttt
gttagacccaggttcctaagtcaagatgttgaagcagaaatcagtcacttggatagagaa
attgaaaacaaaagggcacagttgacagcatctcagcaacgtttatattccattgaaaat
gagattaggcaaaatgaagatcatctctatggtcatcgacgacaccaaaaacagctacag
ataaaagtaagaacagcaaatgcagaaatagcagatcttgaaaacatggaagaacaccag
tcagcagacgtccatatattacaagatgaagttgaagaaaataagagtaggatggaatct
gtaaaacaagacatgcagctacaaagcagaaaaatggaagaactggaaaataatctccaa
gcagctgaaaaacaattagaagaagtgaaggaaaaaattcatcaagtagaagaaattgct
ggcccaattaaggctgaattaaaccaggctgagtcagaagtggaaaacagtaaacggcgt
ttgcagcactatgaagacaaacagagagaacacgtggcttgcgtaaataagcacaaagat
ttgctagttgccaaaagaaatgaattagaggaaaaaatggcaaaagcaaggcaaatcttc
tcggagcgcatcatggtcaccagaactgttaaaagtctcgatgcagaaatgaatcgcttg
agagagaagataaattcagaaagcagtcaccgtggaaacagagaagaaataatacagcaa
tttcgttatgcaagggaaagatacgaggatgcaagtaataaagtaaagaatttgaagaga
tttattgcagtgctggatgaagtaatgacagagaggctcaaagtgtatcggcaattctta
aggagcctttctatgcaatgcaaactccattttgagcacttactacgtgttcgaggttgc
tctggaaatataatttttgatcacaagaatgagacactttccataacagttcagcctcga
gaagaagaaaaagcttcccgtagtgatctgagatccctatcaggaggtgaacgttccttc
tccacagtttgtttcattctttctctgtggaacatttctgaatctcctttcagatgcatg
gatgaatttgatgtctacatggacatggttaacagaagaattgccattgatatgattctg
gagagggctgactttcagaggcatcgacagttcattttgttcacacccctgaccatgagt
tctctgcctatgagtccccatattcgaatcctccgcatgccagaccctccaagagaccaa
agaacactgaatttccaaaataggaataacagagatgaagatcaataa
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