Aphelocoma coerulescens (scrub jay): 138108669
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Entry
138108669 CDS
T10543
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acoe03400
]
138108669 (GEN1)
DNA repair and recombination proteins [BR:
acoe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
138108669 (GEN1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
138108669
NCBI-ProteinID:
XP_068867727
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All DBs
Position
3:114492370..114513286
Genome browser
AA seq
935 aa
AA seq
DB search
MGVTYLWQILEPVRQPVNLSSLRGKTLAVDLSLWVCEAQTVKKMIGVVTKPHLRNLFFRF
SFFTSMGIKLVFVMEGEAPRLKADTMSKRNEMRYGPSKKVGAARTGRSLFKAMLKECLEL
LECLGVPWVQAAGEAEAMCAYLNAKGHVDGCITNDGDVFLYGAQTVYRNFAMNAKDPHLD
CYTMSSIKEKLGCDRESLIGLAVLLGCDYLPKGIPGVGKEQALKLIETLRGQNLLQRFEQ
WKEQFQYDDNPPLVVKRVIHCSECHHPGSYKEHEHNGCKICETVRCCKPSDSKHCCPCAW
HQLERVKQANAVEDSIRKKAKSCEGFPFSEVIQEFLVNKNKLISIKECQRPNLLSFQIFA
SEKMEWTKHYACKKLLALLTCYDMIQRKSGYIDSKQLQAIRIVKTRIKNGSPCFEIEWQK
PEHYVDPEDEPVELFVVTIEEESLFQAAYPDVVALYREEKSEVLQKKQKKRKDRPEEKEL
PNACDEVTNLLSQINLKPTNRILPVKHSMSNTKAPSEDQTQQRSTGSKDAALAAASCLTA
VHMPASAALADSSVPSQSTKYSEISSSVPAGLQLSSIDGKGPSFSTSPAHRGDDHDPAAD
LTTCIKHSHPLGRETVRNSSEYSDVAQSDMHSDSEDDLFSNVAMGQLQEWSLSEQILKKA
PIPSQPLSEDVMQLESLKCFKQAKETLHPDRNYVSSSCQLNKPVQESKNVLSENSACESS
VHIYPDEYKKADILAEMVQKGPYISSSTSLAFSGRTTETLHPGCDMLPASQKPADATGCH
IKEACIETTWKASSKKSVCQNRCSSSEDSDEGHVDKILIYEQQKRQLNPGQFKKCFTEKR
SSVVTSKRTNSDSALTIKGKKKTTSLKKDVNSFSVQVSPKPASVQEVNCSQSPEQPVERL
GSDPTQQDKRAVLTYAWADSPLPLSERLKGRIKIN
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgacttatctgtggcaaatccttgagcctgtgagacagcctgtcaacctgagt
agtctcagagggaaaacgcttgctgttgatttaagcttgtgggtttgtgaagcacagact
gttaaaaagatgattggagtagttaccaagccacatctcagaaacctattttttcggttc
tctttctttacatcaatgggaattaaactagtgtttgtcatggaaggagaggcccccagg
ttgaaagcagacaccatgagcaagaggaatgagatgcgctatggaccttcaaagaaagtt
ggagctgcaagaacagggagatctttatttaaagccatgttaaaagagtgtcttgaactg
ctggagtgtttaggtgtcccttgggttcaagcagctggagaagcagaggcaatgtgtgca
tacctaaatgcaaaaggacatgttgatggctgcattaccaatgatggagatgttttcttg
tatggagctcaaacagtttataggaactttgccatgaatgctaaggatccacatcttgac
tgttacacaatgtcctctattaaggagaaacttggttgtgacagagagtctttgattggg
ctagcagttcttctgggctgtgattatcttccaaaggggattccaggagttgggaaggaa
caagctttaaagttaattgaaactctgcgaggtcaaaacttactgcaaaggtttgagcag
tggaaggaacaatttcagtatgatgataatccacctttggttgttaaaagggtaattcac
tgttcagagtgccatcatccaggatcttacaaggaacatgagcacaatggatgtaaaatc
tgtgaaactgtgagatgctgcaaacccagtgactccaaacactgctgcccttgtgcatgg
catcagttggagcgagtgaaacaagcaaatgcagtggaggacagtatcagaaaaaaagcc
aagagttgtgagggctttccattctctgaggttatccaagagtttcttgtaaacaagaac
aaattgatcagcataaaggaatgtcaaaggccaaatttattgtcctttcagatatttgct
tcagaaaaaatggaatggaccaaacattatgcttgtaagaagctgttagcactgttgaca
tgttatgatatgatccagagaaaatctggatacattgactcaaaacagctgcaggcaata
cggattgttaagacacgtattaaaaatggaagtccttgttttgaaattgaatggcaaaaa
ccagaacattatgttgatccagaagatgagcctgtggagttgtttgtagtcacaatagaa
gaagagtctttgtttcaggctgcttatcctgatgtcgttgccctctatcgagaagaaaag
tcagaagttcttcagaagaaacagaaaaaaaggaaagacagaccagaagaaaaggaatta
ccaaatgcttgcgatgaagttactaatcttctgtctcaaattaatttaaagccgacaaac
agaattcttcctgtgaaacactccatgtcaaatacaaaagctccctcagaagaccagacc
cagcagagaagtactggatcaaaagatgcagcattagctgcagcttcctgcctaacagca
gttcacatgccagcatcagctgctcttgctgactcatctgtgccctcacaaagcactaaa
tattcagagatatcatcctctgtaccagctggtctgcagctgagcagtattgatgggaaa
ggaccctccttcagcacttcaccagcccatcggggtgatgaccatgatccagcagctgac
ttaaccacatgcataaaacactcacatccactaggtcgtgaaacagtaagaaatagctca
gaatattcagatgttgcacagtctgatatgcattcagatagtgaagatgatttgttttca
aatgttgctatgggacaacttcaggagtggtctttaagtgagcaaatactgaagaaggct
cccattccctcacagcctttatctgaagatgtaatgcaactggagtctttgaaatgtttt
aaacaagcaaaagaaacattgcatcctgataggaactacgtctcttcctcatgtcaatta
aataaaccagtgcaggaaagtaaaaatgttctctcagaaaactctgcatgtgaatccagc
gtgcatatctatccagatgagtacaaaaaagctgacatcctggctgaaatggtgcaaaaa
ggcccttacataagcagttcaacatctctagccttcagtgggcgaacaacagagactctt
catcctgggtgtgacatgcttccagcatctcaaaagccagcagatgcaactggttgtcac
attaaagaagcctgtattgaaactacttggaaagcttcttctaaaaagagtgtctgtcag
aacagatgctcttctagcgaagacagtgatgaggggcacgtggataaaatcctgatttat
gagcagcagaaaaggcaactgaaccctggccagtttaaaaaatgttttaccgagaaaagg
agtagtgttgttactagcaaaaggacaaacagtgactcagcccttacaattaaggggaag
aagaaaactaccagtttaaagaaagatgttaatagcttctcagttcaggtatctccaaaa
ccagcctctgtacaggaagttaattgttcccaaagtccagagcaaccagttgagagattg
ggttctgatcccacacagcaggacaaaagggctgttctgacttacgcatgggcagacagt
ccccttcccctctctgaaagactgaaaggaagaatcaaaatcaattag
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