Aphelocoma coerulescens (scrub jay): 138108713
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Entry
138108713 CDS
T10543
Symbol
TDRD6
Name
(RefSeq) tudor domain-containing protein 6 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Gene silencing
piRNA pathway
138108713 (TDRD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
DUF4537
SGF29_Tudor
Tudor_krimper_1st
Motif
Other DBs
NCBI-GeneID:
138108713
NCBI-ProteinID:
XP_068867836
LinkDB
All DBs
Position
3:complement(119897666..119908748)
Genome browser
AA seq
2311 aa
AA seq
DB search
MRAGPGSLGRGDTVTLRVSAVGLYPEVPILRLWGLLGEREADYALLHREIQAAAGPRLAA
RPEPSGPGASGTRLCPGELALVEVLGIWYRCCVVSCSAQGYRVFLLDEGYVVATSAYYLA
RGCSELFQLRPEVLGCVVADVMPSQGHEGTACGDSPVSKWSVEAMEFLSFLHGKEVSGVV
QEVITPQLIVLELPQLVAQMRQLGLAKRVSPSWFCQVLRRCLPFGQLKKQLCQQPPACSL
GTFAVPQLVHVLLSYWPLSPALDYYYPQLQLGVTEPVLVTHVSDPHHIYCQLQCLSEEIC
CLSDTMCHAYDQWEQDLLPKVGSPCAARGMDGQWYRAILLELIGEGQDQHAALVIFVDYG
RKETVTRANLRHLPAECFRMPVVTYVCALQGVSDGGRGWSPLQVDLLKALVLGRGVSAHI
EAFNSFEHLYYVTLYGENGVDLNRLFGSQACCLVSTHVSQTEAREQLEVEESLAEELGLP
PEAPPVLTHGGLAGAAVTGVHLKTWTFYSARVSHLQDPSEFWLQLHEHYQLFRQLRQCMW
NFYSHSTKLDGAGWNPQPGSLCCASWNEGVFYRAVVTRVLDTGVEIHLVDRGSTETVGLC
AVKELLPRFRELPALALKCCLAGVSPLRGSWSEASVSAFREMVLNKGLKVWFLSVQGDKY
MVEIFDQSQLGERRVSKLMGQRGYAKYQRYEIPKTSQKSDKSVTQASSLVCAAEESQKNA
EKRLREECDLKSSDRVVDSHVGVMVRESPIAAIHSSRSSELCSRDYEGKENLHSSLGQNY
VEIKPGSSCGGHLEVGSTVNVILSYVENPSCFWCQLSRNFHDLEVLMDEIQEHCKTSSQP
HVWPNLVCLAQYSEDKKWYRALIVNEGVCAEKVEVIYVDYGNREQVCLTNLRAISERFLR
LEAQAFRCSLYNLIQPNGQNPFAWDEEAIRTFRQFVVDSSSDLDLKCTIFALASINRDLF
NIVDLVTPFQSACQFLTEKGVARSLFPQKHLESLVQLHSFYYSSHGIKIGSEEDIYITHV
ENPWTFYCQLERCADTLAQLADNISHLSERVTSTGTLGKSGTLCLARYSDSQWYRGVIME
RQPKAKVFFVDFGNTEAIEKDDLLILPNDASDILLVPMQAIKCSVSDVSSVSKEAATWFK
EAVLERRLKAIVVAKDSDNTLLVELFDGNTQINTKLKDLSLNSTGLCSHVHSETLCSRNT
DVNERDEPAESPLNAGRPLERKRRPEAQQEQGSRRHLKEEVVNLFQHSVRGDVAAGLLGP
DEMLSNKDAILLDKAGEASLLFSQMDTLSDTKSDAEGRCIMLKNSSDLPPQKIVPALKTL
VYVSYINDLQDFYVQLGSDEVQLNSILESLNNGKSVKEPCGQLFQAGDLISAVYSEDSLW
YRAVVKEKTSDNSIKVHYIDYGDTSVISVDQACRLPKDLSSIPAMSIHCFLGGLKCKKNA
DWTEKAMFYFTKRTSEILLSCEFVKKVDDKWEVILSDHQGIITVDLADKDLASRERLFLR
KKMDKRENSDMITVCEPLPPQVQNEISCVSDYKSFIWKFPEAGQTLKIYVTVVNSPGFFW
CHCADTKDVSYIEKKIEEAEKLGLSSLNDGKSCIKSGDTCLAKYSQDGWFYRAQISSVKD
DSVVVRHVDYGSEEAISLEMIRQMPCELLRVPAQAFACCLSGFSPSEGSWLSDANKKFYD
MTENVVLEAEVVEIRENKDSEVPLCVVKLEASGNSINEEMKPFWKANKETGDSAFSNLCN
SLKENSSSNSNLGLCLDKETTAVCGLAQEESENALFCSDPFLGVTSECLETAEANVSVGA
ANGKVDDGYEMGECENSFDKETALSEGDSDNNMLLEPIKSYSPHIVGNGMKAVEQDLPEI
MFGEEAEPKAKLTGSAPAASLFLGKEQELQRLPVLQAQPSASNGTGTSELEPLEMHLPCR
DLNELLEELEGLLEKSSFGEGTKEALEAKSLEMQAASGSKAREMVLEQELLELTVVREET
GQLGALNCFEILPLCNEKEKLVPSVSDREKSVELIASDVQPSLGEKTKKLQANLSGIHET
EAVLDDWMEADSPSLRLSSSGGRPEKELHQKMHDKQLMLGAKFEPFLEPVLPDVQPPQED
REEDLLGLEHDVLQSSANSGSQFSFLSKDSANQRPVFTVKSHDCQVEKHKGWQKKKEDCV
EEWMEQDLTDSFKESGNMCVQSLGCRPGEDEKQNENLADYSAAHHDYPCNLKGFAVGSKC
VVWTSLKWCNARILEVSEKGTKVLNLCSGNEEIVHPENVWNGIPDWARRSSEALTPATEN
LQSLPEESLLQEKQTGCSSNLAEDPHVLQHC
NT seq
6936 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccgggccggggtccctcggccgcggcgataccgtcaccctgcgggtcagcgcc
gtggggctctaccccgaggtgcctatcctgcggctgtgggggctgctgggcgaacgcgag
gctgactatgccctcctccaccgcgagatccaggcggcggccggtccgcgcctggcggcc
cgcccagagcccagcgggccgggggccagcgggaccaggctgtgcccaggagagctggca
ctggtggaggtgttgggcatctggtaccgctgctgtgtggtgagttgcagtgcccagggg
taccgtgtcttcctgctggacgaggggtacgtggtggccacatccgcatactacttggca
cggggctgctcagagctgttccagctgcgcccggaggtgctgggctgtgtcgtggctgat
gtcatgccctcccagggtcacgaggggacagcctgtggggattcaccagtgtccaagtgg
agcgtggaggcgatggagttcctcagcttcctgcatggcaaggaggtgtccggtgtggtg
caggaggtgataacgccacagcttatcgtactcgagctgccccagctcgtggcccagatg
cggcagctgggcctggccaagcgtgtctctcccagctggttctgccaggtactcaggcgc
tgcctgccttttggccagttaaagaagcagctctgtcagcagcctccagcgtgttccctt
ggaacttttgcagttccacagcttgtccatgtgttgctctcgtactggcctctgtcacct
gccttggattactactaccctcagcttcagttgggtgtgacagagcctgtcctagtgacc
catgtctctgacccacaccacatctactgccagttgcagtgcctgtctgaggagatctgt
tgcctttctgataccatgtgccatgcttatgaccagtgggagcaggatttattgcccaaa
gtgggctcgccctgtgctgcccgtgggatggatggccagtggtaccgtgccattctgctg
gagctcattggtgaggggcaggaccagcatgcagctctcgtgatctttgtggactatggc
aggaaggagactgtaaccagagctaacctgcgccatttgcctgctgagtgttttcgcatg
cctgtagtcacttacgtctgtgctcttcagggtgtttcagatggggggcgaggctggtcc
ccgttgcaggtcgatttgctgaaagcattggtgcttggcagaggagtgagtgcgcacatc
gaagcctttaactcctttgagcatctctattatgtgacgctctatggggaaaatggcgtt
gatttgaaccgtctttttgggtctcaggcttgctgcctggtcagcactcatgtgagccaa
actgaggctcgtgagcagctggaagtagaggaatccttagctgaagaattgggattgcca
ccagaagcacctcctgttttaacacacggaggtttggctggtgctgctgtaactggtgtg
catctgaagacctggacattctacagtgcacgggtctctcacctccaagacccatctgag
ttttggctgcagctccatgagcattaccagctcttcaggcagctaaggcagtgcatgtgg
aatttttattcccattccacaaagctggatggtgctgggtggaacccacagcctggatcc
ctttgttgtgccagttggaacgagggtgtcttctatcgagcagtggtcaccagggtactg
gacactggggtggaaatacacctggtggacagaggcagtacagaaactgtgggtctgtgt
gctgtgaaggagctgctccctcggttcagggagctgcctgctttagctctgaagtgttgt
ttggcaggtgtctcccctctgagagggagttggagtgaagcctctgtgtctgcattcagg
gagatggtactgaacaaaggactaaaggtttggtttttgagtgtgcagggtgacaaatac
atggttgaaatttttgaccagtcccagttaggagagagaagagtaagtaaactcatgggc
cagaggggttatgctaaataccagaggtatgaaatacccaagacttcccagaaatcagat
aagtctgtgacacaggcctcttctctagtatgtgctgcagaggaaagccaaaaaaatgca
gagaagaggctcagagaagaatgtgatctaaagagcagtgatagagtggttgattctcat
gtgggtgtgatggtcagagagagccctattgcagccattcacagttctagaagtagtgaa
ctttgttctcgagactatgagggtaaggaaaatctgcactcttctttgggacagaactat
gtggaaattaagccaggctcttcttgtggaggccacttagaagtgggaagtacagttaat
gttattttgtcatatgttgaaaatcctagttgtttttggtgtcagttaagtagaaatttc
catgaccttgaggtactaatggatgaaattcaggagcattgcaagacttcatcccagcca
catgtttggccaaatcttgtgtgtttagcccagtactcagaggataaaaaatggtacagg
gctttaatagttaatgaaggagtgtgtgcagaaaaagtagaagtcatatatgttgactat
ggcaacagagagcaggtgtgtctaacgaacctccgtgcaattagtgaacgcttccttagg
ttagaggctcaggcattcaggtgcagcctttacaacttaatccagcctaatggtcagaat
ccttttgcctgggatgaagaagccattcggacttttcggcagtttgttgttgattcatca
tctgaccttgatctgaagtgtacaatatttgccttggcttcaataaatagggacctgttt
aacattgtagatttagtcacaccttttcagagtgcttgccagtttctcactgagaaaggt
gtagccagatccttatttcctcaaaagcacttggaatctttggtccagcttcactctttc
tattattctagtcacggtatcaaaattgggagtgaggaagacatttatattacgcatgtt
gagaatccatggacgttttactgccaacttgaaaggtgtgcagataccttggcacagctg
gctgataacatcagtcacctgagtgagagagtgaccagcacaggaaccttggggaagtct
gggaccttgtgtctggcaaggtactctgacagtcagtggtataggggagtaattatggaa
agacaacctaaggctaaagtcttctttgtggattttgggaacacagaagcaatagagaaa
gatgatctgcttattttacccaatgatgcttctgatatcttgcttgtgccaatgcaggcc
ataaagtgttctgtgtctgatgtatcatctgtttccaaagaagctgcaacatggtttaag
gaagctgtcctagaaaggagattaaaagcaatagtggtagcaaaggactctgataataca
ctgctggtagagttgtttgatggaaatactcaaattaatacaaaactgaaggacctaagc
ctaaacagtacaggactgtgtagtcatgtacacagtgagactttgtgctctagaaataca
gatgtgaatgagagggatgagcctgcagagtcccctttaaatgcaggtaggcctcttgaa
agaaaacgtcgacccgaagcccagcaagaacaagggagcagaagacacttaaaagaagaa
gttgtaaaccttttccagcactctgtgaggggagatgtggcagctggattactaggacct
gatgaaatgcttagcaataaggatgctattttgttggataaagcaggggaggcgtctctg
ctcttttcccagatggatacactgtcagatactaaatctgatgctgaaggcaggtgtata
atgcttaaaaattcatctgatctaccaccacagaagatagtgccagctcttaaaacctta
gtgtatgtgtcttacatcaatgacctgcaggatttttatgttcaactagggagtgacgag
gttcagcttaacagtattttggaaagtttaaacaatgggaaatcagtgaaggagccttgt
ggacaacttttccaagcaggagatttaatcagtgctgtgtattcagaagacagcctgtgg
tatcgagctgtagtaaaagagaagacttctgacaattcgataaaggtacattatattgat
tatggtgacacttcagtgattagtgttgatcaagcatgcagactccctaaggacttgtca
tctattccagcaatgagtattcactgctttctaggtggacttaaatgcaaaaaaaatgca
gactggacagagaaagcaatgttttacttcaccaagagaacaagtgaaatcctgctgtct
tgtgaatttgtaaagaaggttgacgataaatgggaagttattctcagtgaccatcaaggt
ataataacagtggatttagctgataaagatcttgcaagtagagaaagacttttcttaaga
aaaaaaatggataaaagagagaacagtgacatgataactgtctgtgagcctttgcctcct
caggtacaaaatgagatttcctgtgtaagtgattataaatcatttatctggaaatttcca
gaggcaggtcagactttaaaaatttatgtcacagtggtaaatagtccaggattcttctgg
tgtcactgtgctgataccaaagatgtgagctacatcgagaaaaaaatagaggaagctgaa
aagcttgggctaagctctctgaatgatggcaagtcttgtattaaaagtggtgatacttgt
ctagcaaaatacagtcaagatggatggttctacagagctcagatcagcagtgtgaaagat
gacagtgtagttgttagacatgtggattacggcagtgaggaagccatcagcctggagatg
atccgacagatgccatgtgaactgctcagagtacctgcacaagcatttgcttgctgtctg
tcaggtttcagtccctcagagggctcatggcttagtgatgcaaataagaagttttatgat
atgactgaaaacgttgtattagaagctgaagtagtagaaattcgggaaaataaagattct
gaagtccctctgtgtgttgtcaagctggaagcttctggaaatagtattaatgaagagatg
aagcctttctggaaggctaataaagaaactggtgacagtgctttctcaaacctttgcaac
tccctaaaggaaaatagcagttcaaacagcaatttgggtctttgtctcgacaaagaaact
actgctgtttgtggattagctcaggaagagagtgaaaatgctttgttttgttctgatcct
ttcctgggtgtaacttctgagtgtttagagactgcagaagcaaatgtgtcagtgggagct
gccaatgggaaggttgatgatggatacgaaatgggagagtgtgagaacagttttgataaa
gagacagctctgtctgaaggtgacagtgataacaatatgttactagaaccaataaaaagc
tacagtcctcatattgtggggaatggaatgaaagctgtggaacaagacttgcctgaaata
atgtttggagaggaggctgagccgaaagcaaaactgacaggcagtgctccagcagccagc
cttttcctaggaaaagaacaagaactgcagagattgccagtgctccaggcacagccatct
gcaagcaatggaacagggacatcagaactggaaccattagaaatgcacttaccgtgtcgt
gatctaaacgagctcttggaggagctagagggacttttggaaaagtcctcctttggtgaa
ggaacaaaggaagcactggaagcaaagtcacttgaaatgcaggcagcgtcaggcagcaaa
gcaagagagatggtgttggaacaggaactgctggagctgacagttgtgagggaggagaca
gggcagttgggagctctgaactgttttgaaattttaccattatgtaatgagaaagaaaag
ctggtgccttcagttagtgacagagagaagtcagtagagctgattgcatctgatgttcag
ccttctttgggagagaagaccaagaaactgcaagcaaatttgtccggaattcatgaaaca
gaagctgtactagatgattggatggaagcagattctccttccctacggctgtcatcatct
ggtggtagacctgagaaagaactgcaccagaagatgcatgacaagcagttgatgctagga
gccaaatttgagccctttctggaaccggtgctgcctgatgttcagccgcctcaggaagac
agggaggaggacttgttagggctggaacatgatgtgctgcagagttctgcaaatagtggc
agtcaattttcatttctttcaaaagactcagcaaatcagaggcctgttttcactgtgaag
tcacatgactgccaagttgagaaacacaaggggtggcagaagaagaaagaggactgtgtg
gaagaatggatggaacaagacttgactgactcatttaaagagagtggaaatatgtgtgtt
cagtctttaggctgtaggcctggggaagatgaaaagcaaaatgagaacttggctgactac
agtgcagcacaccatgactatccttgtaatctgaagggctttgctgttggttccaaatgt
gtggtgtggacctctctcaaatggtgcaatgctcgcattttggaggtatctgagaagggt
accaaggtcttgaacctctgcagtggcaatgaggagattgtgcatcctgagaacgtctgg
aacggaattcctgactgggctcgcagatcctctgaggcattaacccctgcaacagaaaac
ttgcagtccttaccagaggagtccttacttcaagaaaagcaaactggctgcagtagcaat
ttagctgaagatcctcatgtcctccagcattgctga
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integrated database retrieval system
