Aphelocoma coerulescens (scrub jay): 138108936
Help
Entry
138108936 CDS
T10543
Symbol
PCDH10
Name
(RefSeq) protocadherin-10 isoform X1
KO
K16499
protocadherin delta 2
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acoe04515
]
138108936 (PCDH10)
Cell adhesion molecules [BR:
acoe04515
]
Cadherins
Protocadherins
138108936 (PCDH10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
138108936
NCBI-ProteinID:
XP_068868178
LinkDB
All DBs
Position
4:8658688..8692120
Genome browser
AA seq
1066 aa
AA seq
DB search
MIVLFLFALLWMVEGAFCQLHYTVQEEQEHGTFVGNIAEDLGLDITKLSARRFQTAPNSR
SPYLELNLETGVLYVNEKIDREQICKQSPSCLLHLEVFLENPLELFRVEIEVLDINDNPP
SFPEPDLTVEISESATPGTRFPLESAFDPDVGTNSLRTYEITPNSYFSLDVQTQGDGNRF
AELVLDQPLDREQQAVHRYVLTAVDGGQPQQRTGTALLTVRVLDSNDNVPAFEQPVYTVS
LPENSPPGTLVLQLNATDPDEGQNGEIIYSFSSHISARARELFGIAPRTGRLEVSGELDY
EESSVYQVYVQAKDLGPNAVPAHCKVLVRVLDANDNAPEISFSTVKEAVSEAAAPGTVVA
LFSVSDRDSEENGQVQCELLQGDAPFRLKSSFKNYYTIVTEGPLDREQPGGDAYTLTVVA
RDHGEPPLSTSKSIQVRVSDVNDNAPRFSQPVYQVYVSENNVPGAYIYAVSATDRDQGAN
AHLAYSILETQIQGMSVFTYVSINSENGFLYALRSFDYEQLKEFSFQVEARDAGEEPQPL
AGNATVHIIVVDQNDNAPAIVSPLPGRNGTPAREALPRGAEPGYLVSRVAAVDADDGENA
RLTYSIARGNEAGLFRMDWRSGELRTARRVPAKRDPQRPYELVIEVRDHGQPPLSSTAAV
QVVLVDGAGERSGGGGGPAAGTGAGGGGGGSGEHRPSRSGGDNSLDLTLILIIALGSVSF
IFLLAMIVLAVRCQKEKKLNIYTCLASDCCLGCCCCCPCCSRQARARKKKLSKSDIMLVQ
SSNVPSNPAQVPVEESGSFGSHHHNQNYCYQVCLTPESAKTDLMFLKPCSPSRSTDAEHN
PCGAIVTGYADQQPDIISNGSILSSETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDS
GHGDSEQGDSDHDATNRGQSSGMDLFSNCTEECKALGHSDRCWMPSFVPSDGRQAADYRS
NLHVPGMDSVPDTEVFETPEAQPGAERSFSTFGKEKALHNSLERKEFDGLLSNTRAPYKP
PYLKHGWQQSNPHPTSPSPSPSRVSHPLPGCTTTKALAISGSQSGL
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgctattcctctttgccttgctctggatggtggagggggccttttgccagctc
cattacacggtgcaggaagagcaggagcatggcacgttcgtggggaatatcgccgaggac
ctgggcttggacattacaaaactttccgctcggcgcttccagacggcgcccaactcccgc
agcccttacctggagcttaacctagaaaccggggtactctacgtgaacgagaagatcgac
cgggagcagatctgcaagcagagcccctcctgccttctgcacctggaggtcttcctggag
aaccccctcgagctgttccgggtggagatcgaggtgctggacatcaacgacaacccgccc
tcctttccggagcccgacctcaccgtggagatctcggagagcgccacgccgggcacccgc
ttcccgctggagagcgccttcgaccccgacgtgggcaccaactccctgcgcacctacgag
atcacccccaatagctacttctccctcgacgtgcagacgcagggggacgggaaccgcttc
gccgagctggtgctggaccagccgctggaccgggagcagcaggcggtgcaccgctacgtg
ctgacggcggtggacggcgggcagccccagcagcgcaccggcaccgccctgctcaccgtc
agggtgctggactccaacgacaacgtccccgccttcgagcagcccgtctacaccgtgtcg
ctgccggagaactcgccgccgggcaccctggtgctgcagctcaacgccacggaccccgac
gaggggcagaacggcgagatcatctactccttcagcagccacatctcggcccgcgcccgg
gagctcttcggcatcgcgccgcgcaccgggcggctggaggtgagcggcgagctggactac
gaggagagcagcgtgtaccaggtgtacgtccaagccaaggacctggggcccaacgccgtg
ccggcccactgcaaggtgctggtacgggtgctggacgccaacgacaacgcgcccgagatc
agcttctccaccgtcaaggaggcggtgagcgaggcggcggcgccgggcaccgtggtagcc
cttttcagcgtctcggaccgcgactcggaggagaacgggcaggtgcagtgcgagctgctg
cagggcgacgcgcccttccgcctcaagagctccttcaagaactactacactattgtcacc
gaggggccgctggaccgcgagcagccgggcggcgacgcttacacgctcaccgtggtggcc
cgcgaccacggcgagccgccgctcagcaccagcaagtccatccaggtgcgggtgagcgac
gtgaacgacaacgcgccgcgcttcagccagcccgtgtaccaggtgtacgtgagcgagaac
aacgtgcccggcgcctacatctacgccgtcagcgccaccgatcgcgaccagggtgctaac
gcccacctcgcctactccatcctggagacccagatccagggcatgtccgtcttcacctac
gtctccatcaactccgagaacgggtttctctacgccctccgctccttcgactacgagcag
ctcaaggagttcagcttccaggtagaggcccgcgacgcgggcgaggagccgcagccgctg
gccggcaacgccaccgtccacatcatagtggtggaccagaacgacaacgcccccgccatc
gtcagccccctgcccggccgcaatggcaccccggcgcgggaggcgctgccccgcggcgcc
gagccgggatacctggtgagccgggtggcggcggtggacgccgacgacggggagaacgcc
cgcctcacctacagcatcgcgcggggcaacgaggccgggctgttccgcatggactggcgc
tccggggagctccggacggcccgcagggtgccggccaagcgcgacccgcagcgcccctac
gagctggtcatcgaggtgcgcgaccacgggcagccgccgctctcctccaccgccgccgtc
caggtggtgctggtggacggcgcgggcgagcggtccggcggcggcggtggcccggccgcg
ggcacgggcgcggggggcggcggcggcggctccggcgagcatcgccccagccgctccggg
ggggataactcgcttgacctcaccctcatcctcatcatcgccctgggctccgtctccttc
atctttctgctggccatgatcgtcctggccgtgcgctgccagaaggagaagaagctcaat
atctacacctgcctggccagcgactgctgcctgggctgctgctgctgctgcccctgctgc
agccggcaggcgcgggcccgcaagaagaagctcagcaagtcggacatcatgctggtgcag
agctccaacgtgccgagcaacccggcgcaggtcccggtggaggagtcgggaagcttcggc
tcccaccaccacaaccagaactactgctaccaagtctgcctcacccccgagtccgccaag
accgacctgatgttcctcaagccctgcagcccctctcgcagcaccgacgccgagcacaac
ccctgtggggccatcgtcaccggctacgccgaccagcagcccgacatcatctccaacggc
agcattttgtccagcgagacaaaacatcagcgtgctgagctcagttatctagttgacaga
ccccgacgagtaaacagttctgcattccaggaagcagacatagtaagctctaaggacagt
ggtcatggagacagtgagcaaggagacagtgatcatgatgccactaatcgaggtcaatcc
tctggcatggatctcttctccaattgcacagaggaatgtaaagcactgggccactcagat
cggtgctggatgccttcctttgttccatccgatggacgccaagctgcagattaccgcagc
aatctgcacgtacctggcatggactccgttccagacactgaagtgtttgaaacaccagaa
gcccagcccggggcagaaaggtccttctccaccttcggcaaagagaaggcccttcacaac
agtctggaaaggaaggagttcgatggactgctgtctaatacacgagcgccttacaaacca
ccatatttgaaacatgggtggcagcagagtaatccccatcctacatcccccagccccagc
cccagccgtgtgtctcaccctttacctggatgcaccactacgaaggcacttgccatctct
ggatctcaaagtggattataa
DBGET
integrated database retrieval system
