KEGG   Aphelocoma coerulescens (scrub jay): 138109138
Entry
138109138         CDS       T10543                                 
Symbol
MSX1
Name
(RefSeq) homeobox protein MSX-1
  KO
K09341  homeobox protein MSX
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:acoe03000]
    138109138 (MSX1)
Transcription factors [BR:acoe03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: NKL
    138109138 (MSX1)
SSDB
Motif
Pfam: Homeodomain Homeobox_KN HTH_NDX
Other DBs
NCBI-GeneID: 138109138
NCBI-ProteinID: XP_068868318
LinkDB
Position
4:66540451..66543496
AA seq 295 aa
MAPAVDMTAAPTGVRSDELPASAFSSPSGGALPVAAAAMGGEEESDKPKVSPSLLPFSVE
ALMADHRKPGGRDGPEGAGPPPGAGAAARSSLSPRLGALSAEAPPSPLPLGGHFSVGGLV
KLPEDTLVKAESPEKQERSPWMQTPRFSPPPARRLSPPACTLRKHKTNRKPRTPFTTAQL
LALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKP
MLPPAAFGISFPLGGPAVAGASLYGASSPFQRAGLPVAPVGLYTAHVGYSMYHLT
NT seq 888 nt   +upstreamnt  +downstreamnt
atggccccggctgtggatatgaccgccgcgcccaccggggtccgcagcgacgagctgccc
gcatccgccttcagcagtcccagcggtggcgcgctccccgtcgcggcggcggcgatgggc
ggggaggaagaaagcgacaagcccaaggtctccccatccctcctgccgttcagcgtggag
gcgctcatggccgaccacaggaagccgggaggcagggacggacccgagggcgccgggcct
ccgccgggcgctggggcggccgcccgctccagcctcagtccccgcctgggcgcgctgtcg
gcggaggcgccgccttcccccctgcccctcggcgggcacttctccgtcgggggcctggtc
aagctgcccgaagacacgctcgtcaaggcggaaagccccgagaagcaggagcggagcccc
tggatgcaaaccccgcggttctcgccgcctcccgcgaggcggctgagccccccagcctgc
accctgcgcaagcacaagacaaacaggaagccccggacgcccttcactacggcgcagctg
ctggccctcgagaggaagtttcggcagaagcagtacctgtccatcgctgagcgtgcagag
ttctccagctcgctcagcctcaccgagacccaggtgaagatctggttccagaaccgccgt
gccaaggccaagaggctccaggaggccgagctggagaagctgaagatggcagccaagccc
atgctcccgcctgctgctttcggcatctctttcccactgggcggcccggccgtggccggt
gcttccctgtacggtgcctccagcccttttcagcgggcagggttgcccgtggctcctgtg
ggactgtacacagcacatgtgggatacagcatgtaccacctcacatag

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