KEGG   Aphelocoma coerulescens (scrub jay): 138109272
Entry
138109272         CDS       T10543                                 
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
  KO
K14308  nuclear pore complex protein Nup54
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    138109272 (NUP54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acoe03019]
    138109272 (NUP54)
Messenger RNA biogenesis [BR:acoe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     138109272 (NUP54)
SSDB
Motif
Pfam: Nup54 Nup54_C XhlA KRTAP
Other DBs
NCBI-GeneID: 138109272
NCBI-ProteinID: XP_068868507
LinkDB
Position
4:complement(1748596..1771880)
AA seq 502 aa
MAFNFGATAGAGAANPTGAFGGFGTTTTTAAPAFSFSAPTNTGTSGLFGATQNKGFGFGT
SFGTGTGTGLGSGLGTGLGFGGFGTQQQQQQTTLGSGLFNQPAQTPAQSNQLINTASALS
APTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRFKAVGYSLMPNNK
DEDGLVVLVFNRKETDIRSQQQQLVESVHKILGGNQTLTVNVEGVKTMPDDQTEVIIYVV
ERSPNGTSRRVPATTLYAHFEQANIKSSLQQLGVSLSMARTELSPAQVKQLLQNPPAGVD
PIIWEQAKVDNPDPDKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQ
TTTMAKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPT
QFKGRLNELMSQIRMQNHFGAVRAEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDL
EDIKLIEHGLNESIPIRGGVFS
NT seq 1509 nt   +upstreamnt  +downstreamnt
atggccttcaacttcggcgccacggcaggagccggggccgccaacccgaccggtgccttc
ggaggcttcgggacaaccaccaccactgcggcaccagcgttcagcttctccgctcccacc
aataccggcaccagtggactctttggtgctacccagaacaaaggctttggatttggtacc
agttttggcacaggaactggaactggcttgggtagtgggttgggaactgggctaggcttt
ggaggcttcggaacccagcagcagcagcagcagaccacattaggtagcgggctgttcaac
cagcctgcccagacacctgctcagtccaaccagctcatcaatacagccagtgccctctca
gccccaacactcctgggagatgagagggatgccattctggccaaatggaaccagctccag
gccttctggggcacaggcaaaggatatttcaacaacaacattgctccggtggagttcacg
caggaaaaccccttctgcaggtttaaggctgtgggttacagtttaatgcccaacaacaag
gatgaagatggcctcgtggtcttggtgtttaacagaaaagaaacggatattcgaagccag
cagcagcagctcgtagaatcagtacacaaaattttgggaggaaaccagaccctcactgtc
aatgttgaaggtgttaaaacaatgccagatgaccagacagaagtgatcatttacgttgtg
gaacgctcgcccaacggcacctcgaggagagttcctgcaacgaccctctacgcccacttt
gaacaagccaacatcaaatcatccctgcagcagctgggggtcagcctgtccatggccagg
acggagctgtccccagcacaagtcaagcagctcctgcagaaccctcctgccggtgttgat
cctattatatgggaacaagccaaagttgataatcctgatcctgataagcttattcctgtg
ccaatggtgggtttcaaggaactgttgagaagactgaaggtccaggatcagatgaccaaa
cagcatcaaactcgattagacataatatctgaagatatcagcgagctgcagaaaaaccaa
acgacaactatggcaaaaattgcacagtacaaaaggaaactgatggcgctttctcacaga
actttgcaggtgttgataaagcaggagatccaaaggaaaagcggttacgccattcaagca
gacgaggagcagcttcgtgtacagttggatacaattcagtgtgaacttaatgcacccacg
cagttcaagggcagactgaatgagctcatgtcccaaatcaggatgcagaaccactttgga
gcagtgcgggctgaagagcgctattacatagatgcagacctcttaagggaaatcaagcaa
cacctaaagcagcagcaagaagggctgagtcacctaatcagcatcatcaaggatgacttg
gaggacatcaaactgatagaacatgggctgaatgagagcattcccatcagaggaggagtc
ttcagttga

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