Aphelocoma coerulescens (scrub jay): 138109272
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Entry
138109272 CDS
T10543
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138109272 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoe03019
]
138109272 (NUP54)
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138109272 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
KRTAP
Motif
Other DBs
NCBI-GeneID:
138109272
NCBI-ProteinID:
XP_068868507
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All DBs
Position
4:complement(1748596..1771880)
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AA seq
502 aa
AA seq
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MAFNFGATAGAGAANPTGAFGGFGTTTTTAAPAFSFSAPTNTGTSGLFGATQNKGFGFGT
SFGTGTGTGLGSGLGTGLGFGGFGTQQQQQQTTLGSGLFNQPAQTPAQSNQLINTASALS
APTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRFKAVGYSLMPNNK
DEDGLVVLVFNRKETDIRSQQQQLVESVHKILGGNQTLTVNVEGVKTMPDDQTEVIIYVV
ERSPNGTSRRVPATTLYAHFEQANIKSSLQQLGVSLSMARTELSPAQVKQLLQNPPAGVD
PIIWEQAKVDNPDPDKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQ
TTTMAKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPT
QFKGRLNELMSQIRMQNHFGAVRAEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDL
EDIKLIEHGLNESIPIRGGVFS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaacttcggcgccacggcaggagccggggccgccaacccgaccggtgccttc
ggaggcttcgggacaaccaccaccactgcggcaccagcgttcagcttctccgctcccacc
aataccggcaccagtggactctttggtgctacccagaacaaaggctttggatttggtacc
agttttggcacaggaactggaactggcttgggtagtgggttgggaactgggctaggcttt
ggaggcttcggaacccagcagcagcagcagcagaccacattaggtagcgggctgttcaac
cagcctgcccagacacctgctcagtccaaccagctcatcaatacagccagtgccctctca
gccccaacactcctgggagatgagagggatgccattctggccaaatggaaccagctccag
gccttctggggcacaggcaaaggatatttcaacaacaacattgctccggtggagttcacg
caggaaaaccccttctgcaggtttaaggctgtgggttacagtttaatgcccaacaacaag
gatgaagatggcctcgtggtcttggtgtttaacagaaaagaaacggatattcgaagccag
cagcagcagctcgtagaatcagtacacaaaattttgggaggaaaccagaccctcactgtc
aatgttgaaggtgttaaaacaatgccagatgaccagacagaagtgatcatttacgttgtg
gaacgctcgcccaacggcacctcgaggagagttcctgcaacgaccctctacgcccacttt
gaacaagccaacatcaaatcatccctgcagcagctgggggtcagcctgtccatggccagg
acggagctgtccccagcacaagtcaagcagctcctgcagaaccctcctgccggtgttgat
cctattatatgggaacaagccaaagttgataatcctgatcctgataagcttattcctgtg
ccaatggtgggtttcaaggaactgttgagaagactgaaggtccaggatcagatgaccaaa
cagcatcaaactcgattagacataatatctgaagatatcagcgagctgcagaaaaaccaa
acgacaactatggcaaaaattgcacagtacaaaaggaaactgatggcgctttctcacaga
actttgcaggtgttgataaagcaggagatccaaaggaaaagcggttacgccattcaagca
gacgaggagcagcttcgtgtacagttggatacaattcagtgtgaacttaatgcacccacg
cagttcaagggcagactgaatgagctcatgtcccaaatcaggatgcagaaccactttgga
gcagtgcgggctgaagagcgctattacatagatgcagacctcttaagggaaatcaagcaa
cacctaaagcagcagcaagaagggctgagtcacctaatcagcatcatcaaggatgacttg
gaggacatcaaactgatagaacatgggctgaatgagagcattcccatcagaggaggagtc
ttcagttga
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