Aphelocoma coerulescens (scrub jay): 138109337
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Entry
138109337 CDS
T10543
Symbol
USP53
Name
(RefSeq) inactive ubiquitin carboxyl-terminal hydrolase 53
KO
K27919
inactive ubiquitin carboxyl-terminal hydrolase 53
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
acoe03037
]
138109337 (USP53)
Cilium and associated proteins [BR:
acoe03037
]
Other cilia and associated proteins
Stereociliary proteins
138109337 (USP53)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
138109337
NCBI-ProteinID:
XP_068868662
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All DBs
Position
4:4316564..4346453
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AA seq
1097 aa
AA seq
DB search
MAWVKFLRKPGGNLGKVYQPGSILSLAPTKGLLNEPGQNSCFLNSAVQVLWQLDIFRRSL
RGLTGHVCQGDACIFCALKAIFSQFQHSREKALPSDNMRHALAESFKDEQRFQLGFMDDA
AECFENILERIHFHLVPNSETDMCTSKSCISHQKFAMTLYEQCVCRSCGASSDPLPFTEF
VRYISTTALCNEVEKMMERHERLKPEMFAELLQAANTADDYRKCPSNCGQKIKIRRVLMN
CPEIVTIGLVWDSEHSDLTEEVMRNLATQLYLPGLFYRVTDENAKNSELFLVGMICYTSR
HYCAFAFHTKSCKWVLFDDANVKEIGTKWKDVVSRCIRCHFQPLLLFYANPDGTAVSPED
APKQIIHWSQCKAAGGNGEDLGLEKHSAAKSDHVKENGIGDSTNQRSNKKLQPDNPAFSR
SHIQASGGRGPAKLGYSDQKDRLKDLSRECAQKAADMKNFTSLRKDADRGPRKESGRQRD
LLGEDRSSAKSGSPPVGSGLRHCPDQRIYSSQGRGPYKHDNQAPHQAKLSAHVLGSNKTE
PFPAGEKPVTRTRTNGITGYDTDTSQDSRDKGSVSSRSRSKGWKPMRETLNVDSIFSETE
KKQHSPKHKANLSSKSKHEKERSFNHWPKENQMQKGLMTIYEDETKQDTGSRSSLDSEGK
GNAEKSKGFTERKLYGDNWQIQRTESGYESSDHISNGSANPDSPIIEGINTADAKIAKES
ASCSEQNLPTKKADSVLHSAPEQNRNFHAPDLRKDQISSEVNYRPHPHAGFPTELYLQVP
SPPVKRAEMPEINRKFFPSSALQPVLKEIVKSDSRNKANEPVYCADSVPHPCPDNACGRK
PIHSDFPPPAQPQSHHTRTLGPKVGLVPCAPQTPPERPAVLPAPPSEHAGHPLRRAEPLW
VPEAVYQNIPPPLPPKKYALSTLSGSENNSAVDVKSPEALQSSPLRQTGAPSKSASEESV
VPAEQRLKEPFPGNEVFVHKPDSPPRLSVNEFWTVSENMLKKGSRHTGPSPGYADGNDSV
SLTTYFSVDSCMTDTYRLKYHQRPKLYFTESGSFHKEKHPPAAGVDLNATYPATLEPRHP
IPEQRYKANAEGIHCSR
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggcatgggtgaaattcctaagaaaacctgggggtaaccttggaaaagtttatcagcct
ggaagtatcctgtctctggcccctacaaaaggcttattaaacgaacctggacaaaacagc
tgctttcttaatagtgctgttcaggtattatggcaacttgacatatttcgacgaagttta
agaggtttaactggacacgtgtgtcaaggagatgcctgcatattttgtgctttaaaggca
atcttttcacagttccaacacagtcgagaaaaagccctcccgtcagataacatgagacat
gcccttgcagaaagcttcaaggatgagcagcgtttccagctgggattcatggatgatgca
gcagagtgctttgaaaatatccttgagaggattcattttcacttagtgccaaacagtgaa
acagatatgtgcacttcaaaatcctgtatttctcaccagaagtttgctatgacgctgtat
gagcagtgtgtgtgtcgcagttgtggagcatcatcagatccgttgccttttacagaattt
gtgcgttacatttccaccacagccctgtgtaatgaagtagaaaaaatgatggagagacat
gaacgtctcaagccggaaatgtttgcagaattgctgcaggcagcaaatactgctgatgac
tacagaaagtgtcctagtaattgtggtcaaaaaataaaaattcggcgtgttcttatgaat
tgtcctgagattgtaaccatcggtttagtctgggattcagaacactccgatctgacagaa
gaggttatgcggaatctggcaacacagctttatcttccagggctgttttatagggttaca
gatgaaaatgccaaaaacagtgagctttttctagtgggaatgatttgctacacgagccga
cattactgtgcctttgcctttcacaccaagagctgcaaatgggtgctgtttgatgatgct
aatgtcaaagagattggaacaaaatggaaagatgtggtgtccaggtgcattcggtgtcac
ttccagccattgctgctattttatgctaacccagatggcacagctgtgtctccagaagat
gcaccaaagcagattattcactggtctcaatgcaaggcagcaggaggaaatggggaagac
ctgggacttgaaaagcattctgctgctaaatcagatcatgtgaaagagaacggaattgga
gactccactaatcaaaggagtaataaaaaacttcagccagataatccagcattcagcaga
agccatattcaagcaagtggtggtagaggtccagccaagttaggatacagtgatcaaaag
gacaggctcaaggacttatccagagagtgtgcccagaaagctgctgacatgaaaaacttc
acatctttacgaaaagatgcagacaggggaccaaggaaagagtctgggagacaaagagac
ttgctgggggaagaccgttccagtgctaagtcagggtctcctccggtgggaagtggactg
aggcactgcccagatcagcggatctacagcagccagggaaggggcccctacaagcacgac
aaccaagcacctcaccaagcaaagctttctgcacatgtgcttggatcaaacaaaacagaa
ccttttcctgctggagagaaaccagtgacaaggacacggaccaatggcatcactggctac
gatacggacaccagtcaagactccagggacaaaggaagtgtcagcagcaggagcaggagt
aaaggctggaaaccaatgcgagagacactgaatgtagacagcattttcagtgagactgag
aaaaaacagcacagcccaaagcacaaagcaaacctgagcagtaaatctaagcatgaaaag
gagcggagctttaatcactggccaaaggaaaaccaaatgcagaagggtttaatgactata
tatgaagatgagacaaaacaggatacaggaagtcgaagctcactggattctgagggaaaa
gggaatgctgaaaaaagcaaaggatttacagagagaaaactctatggtgataactggcaa
attcagaggacagaatctgggtatgaaagcagtgaccatatcagcaatggatctgcaaat
ccagactcccctattattgaaggaatcaatacggcagatgccaagattgcgaaggaaagt
gcttcctgcagtgaacagaacttgccaaccaaaaaagctgacagtgtgttacattcagca
cctgagcagaacagaaacttccatgccccagatttgaggaaagaccagatcagttccgaa
gttaactacagacctcatcctcatgctggtttcccaacagaattatatttgcaggtgccc
agtcctccagtaaagagagctgaaatgcctgagatcaacaggaagttttttccatcatca
gctctccagccagttctcaaagagattgtgaagtcagacagcaggaacaaggcgaacgag
cctgtgtattgtgcggacagcgtgccccacccctgcccagacaatgcctgtggcaggaag
ccgatccacagcgactttcccccccctgcccagccgcagtctcaccacacaagaacactg
ggtcccaaggtggggctggtgccgtgtgcgcctcagaccccgccggaaaggccggcggtg
ctgcccgcccctcccagcgagcacgccggccaccccctccgaagggcggagcccctctgg
gtgcctgaagccgtgtaccagaacattcctccccccttacctccgaagaaatacgctctg
agcactttgtcaggatcagagaataactcggcagtggatgtaaaatcaccggaagcgttg
caaagtagtccattaaggcaaacaggtgcaccttcaaaatctgcatcagaagaaagcgta
gtcccagctgaacaaaggcttaaagagccctttccagggaacgaagtgtttgttcataaa
ccggattctccacctcgcttatcagttaatgagttctggaccgtgtctgagaacatgcta
aagaaaggatcccgtcacacgggacccagccctggctatgcggatgggaatgacagcgtg
tccctaaccacttacttctcggtagacagctgcatgactgacacctacaggctgaagtac
caccagaggcccaagctgtattttacagagagtggaagcttccacaaggagaagcatcct
ccagcagctggagtagatctgaatgccacataccctgccactcttgagcccaggcatccc
atccccgaacagaggtacaaggcaaatgcagaaggaatacactgcagtagatag
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