Aphelocoma coerulescens (scrub jay): 138109411
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Entry
138109411 CDS
T10543
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138109411 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
138109411 (PAN3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138109411
NCBI-ProteinID:
XP_068868831
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Position
1:complement(72354382..72457640)
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AA seq
907 aa
AA seq
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MNSSGLPCSSPSPVVGPPPGAGVGVAGPAAGGAGAGGGGGAVKLKFCRYYAKDKTCFYGE
ECQFLHEEPGAAPAGPGPAVPPLGGLPLGIPPPAAAAAGPGYSAHGASSGPAAAVVGPKK
AELGAGGGGGGGGGGLDGPRLAIPGMDGGGLADASLTDSYFSTSFIGVNGFGSPAETKYP
MMQRMTNSSSSPSLLNDSAKQYAGHDPLASPNSSLFNDFAALSVSQRRKLAKPAFPSFIT
DLEDRYNTVLPRKYRLGMLDERIVPVGSKARKSKNPIGCLADRCKTGVPINMVWWNRVTE
NNLQTPNPSASEFIPKGGSTSRLSNVSQSSMSAFSQALFSHPSMGSPAAAGLAPGMSLSA
GSSPLHSPKITPHTSPAPRRRSHTPNPANYMVPTSASASVANAVSQPPSTGQVIQKETVG
GTTYFYTDTTPAPLTGMVFPNYHIYHPAAPHVAYMQPKANAPSFFMADELRQELINRHLI
TMAQIDQADIPAVPAEVDSYHSLFPLEPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYC
LRRIHGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMM
SRHFNDPSADSYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACR
VMDPTKILVTGKTRLRVNCVGIFDVLTFDNSQNNPLALMAQFQQADLISLGKVVLALACN
SLSGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAA
QMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFH
QVTEAGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELI
AAANGQL
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcagcggcctgccctgctcgtcgccgtcgccggtggtggggccgccgccgggg
gcgggggtcggcgtggcggggccggcggccggcggggcgggggccggcggcggcggcggg
gccgtgaagctgaagttctgccgctactacgccaaggacaagacctgcttctacggcgag
gagtgccagttcctgcatgaggagccgggcgccgcccccgccggcccagggcccgccgtc
ccccctctcggcgggctcccgctcggcatccccccgcccgccgccgccgccgccggaccg
ggctactcagcgcacggggccagctcgggcccggcggcagcggtggtggggcctaagaaa
gccgagctgggggcgggaggcggaggcggcggcggcggcggggggctggatggcccacgg
ctggcgattcctggaatggatggtggtgggttagctgatgctagtctgacggactcgtac
tttagcaccagcttcattggcgttaatggatttggaagtcctgctgaaacaaagtatccc
atgatgcagaggatgacaaatagcagcagctcccctagccttctcaatgacagtgccaag
cagtatgcaggccatgatccactagcttcaccaaattcatccttgtttaatgactttgct
gccctcagcgtgtcgcaaaggaggaagctggcaaaaccagcatttccttcgtttatcact
gacttggaggacagatataatacagtcttgcccaggaagtatcgactggggatgctggat
gagaggatagttccggtgggatcaaaagcaagaaaatcaaagaaccctattggctgtctg
gctgacaggtgtaaaacaggagtacccatcaatatggtttggtggaacagagtcacagaa
aacaatttacagacaccaaatccttctgcaagcgagtttattcccaaaggaggatcaact
tccaggctgagtaatgtatcccagtcaagtatgtctgccttctctcaagccttgttctct
cacccctccatgggaagtcctgctgctgctgggttagcaccaggaatgtcactgtcagca
ggatcttcacctctccattctcccaaaataactcctcatacgtctcctgctcctcgaaga
agaagtcatactcctaacccagcaaactatatggtgcctactagtgcctctgcgtctgtc
gctaacgctgtctctcagcctccatctactggccaggtgatccagaaggaaacagtgggt
ggaacaacatacttctacactgatacaactccagcacctctcacaggaatggtatttcca
aactaccacatctaccatccagctgcacctcatgttgcttacatgcagccaaaagcaaat
gcaccttcattcttcatggcagatgagctcagacaggaactcatcaacagacacttaata
acgatggcccagattgatcaggctgatattcctgcagttcctgcggaagtggacagctac
cacagtctctttcctttggaaccactgccaccccccaatcggatacagaaaacgagcaac
tttgggtacattacatcgtgctataaagccgtaaatagtaaagatgacctgccatattgc
cttcggaggatacatggttttcgtcttgttaacacaaagtgcatggtattggttgacatg
tggaaaaagattcagcactcaaatatagtcactttgcgtgaagtgtttaccactaaagct
tttggagaacattctcttgtgtttgcatatgattttcatgctggaggagagactatgatg
agcagacacttcaatgaccctagtgctgattcctatttcacaaaacggaaatggggtcag
catgatggacctctgccacggcagcacgcgggattgcttccagagtctttgatatgggca
tatattgtgcagctcagctctgccttacggaccattcacacagcaggactggcgtgcaga
gttatggatccaacgaagattctggtaacgggcaaaacaaggttacgagttaattgtgtt
ggaatctttgatgttttgacgtttgacaacagtcaaaataatccactggcattaatggct
cagtttcagcaagcagatctgatctccctggggaaagttgtgttggctttggcttgcaat
tctttatcaggaattcagagagagaatttgcagaaagcaatggaactggtgacaatcaac
tattcctctgatctgaagaatctgattttgtatttgctgaccgaccaaaacaggcttcgc
agtgtaaatgatatcatgcctatgattggtgcacgattctatactcagttggatgctgct
cagatgcgaaatgatgttatagaagaagacctagcaaaggaggtgcaaaatggaaggttg
tttaggcttctagcaaaattgggaacaatcaatgagaggccagagtttcagaaggaccca
acatggtcagaaactggagacaggtatttactaaagctctttcgagatcaccttttccat
caggtgacagaagcgggtactccttggattgacctcagtcacattatctcatgtcttaac
aagttagatgctggtgtgccagaaaaaataagcctcatttccagagatgagaagagtgta
cttgtggtaacttacagcgatttaaaacgctgctttgaaaatacttttcaagaactgatt
gcagccgcaaatggtcagttgtag
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