Aphelocoma coerulescens (scrub jay): 138109507
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Entry
138109507 CDS
T10543
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138109507 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoe04121
]
138109507 (HERC3)
Enzymes [BR:
acoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
138109507 (HERC3)
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
HECT type E3
138109507 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Peptidase_C25_C
Motif
Other DBs
NCBI-GeneID:
138109507
NCBI-ProteinID:
XP_068869129
LinkDB
All DBs
Position
4:21383445..21428541
Genome browser
AA seq
1071 aa
AA seq
DB search
MLCSCINSFAGRIHDLLKREKMLCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEV
ACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGSKPEQIGALAGQHIVHVACGESHSVAL
SDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFF
TWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSS
GQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM
NDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPS
PVKGHWAAHNGQLSGKPDACKYHIVKHIFSGGDQTFVLCSKYENSLPADDFRTINETRYT
CLINDETIDVWRQKLLEKNSSNSVNNVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGID
LNSTRVLFEKLMNSQHSILLEQILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDS
KYYISLTLPLAMAILRLDTNPSKVLDNWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTLLI
PVLFSSYITAALRLLEKLHKVNQKVKHVEYDKFYIPEISSLVDIQEDYLMWFLHQAGMKV
RPSIMQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARS
PFLVLHVRRSNLVGDALRELSIHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELL
NPIYGMFTYYPESNLLWFSDTCFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLN
VKPCLEDLKELSPTEGRSLQQLLDYPGEDVEETFCLNFTICRESYGVTEQKNLIEDGDKI
LVQKDNREEFVEAYVNYIFNLSIQEWYTAFSTGFLKVCGGKVLELFQPTELRAMIVGNSN
YNWEELEESAVYKGDYTATHPTVRMFWETFHAFPLEKKKKFLLFLTGSDRIPIYGMSSLR
IIIQSTPSGEQYLPVAHTCYNLLDLPKYSSKEVLSARLVQAIDHYEGFSLA
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgctctgctcctgcattaactcatttgctggaaggatacatgacttgctgaaaagagag
aaaatgctatgctggggctactcgtcttatggacagcctgggataggtagcaacctccag
gtcatcattcctgaaccacaggtgtatggattcatccatgatagaaatgtcaaggaggtg
gcatgtggaggaaaccactctgtgttcctgttggaagatggggaggtgtatacctgtggc
ttgaacaccaaaggtcaactggggcatgactgtgaaggaagcaagccagagcaaattggg
gcgctggctgggcagcacattgtgcatgtggcctgtggggagtcgcacagtgtggccctc
agcgaccagggccagctcttctcctggggcgccggcagcgatggacagctggggctcacc
actatagaagatgcagtgacagtaccaaggttgataaagaaattgaaccaacagacgata
ctgcaggtttcctgtggaaattggcattgcctggctctggcagcagatggccagttcttc
acatggggacagaacagctatggtcagctgggcttgggcaaagaatgtccctcccaagcc
agtccacagcgtgtcaagtctctcgatgggatccctttggctcaggttgctgcaggcgga
gcccacagttttgccctttctctctcaggagctgtgtttggctgggggaagaacagctca
ggacagctgggactaagtgatgaacgagaccgagagtccccttgtcacgtgaagctgttg
cggtctcagaaggttgtttacatcagctgtggagaggaacacacagcagtcctgacaaag
agtggaggggtgttcaccttcggtgcaggttcctgcgggcaactgggacatgattccatg
aatgatgaggtgaacccccgaagagttcttgagctcatgggcagtgaagtatcccagatt
gcttgtggcagacatcacactttagcctttgtgccttcttcaggaatgatctatgcattt
ggctgtggaacaagaggccaactgggaacagggcacacttgcaatgtaaagtgtccctct
cctgtcaagggtcactgggcagctcataatgggcagctctcagggaaacctgatgcctgt
aaataccacattgttaaacatatcttctctggaggagaccaaacatttgtgctttgctcc
aaatacgagaattccttgcctgctgatgatttccggaccataaatgaaacacgttacacc
tgtttaataaatgatgaaactatagatgtctggaggcaaaagcttttagaaaagaacagt
tctaattctgtcaataatgttgttcagatactgtcctcagctgcctgctggaatggaagc
ttcttggagaagaaaatcgatgaacattttaaaaccagtccaaagatcccagggattgat
ctgaactccacgagagtgctgtttgagaagctgatgaactcccagcactccattctccta
gagcagatactgaagagctttgaaagctttttgattcctcagctgtccagctcgccacca
gatgttgaggcaatgaggatctatctgattcttccagaattcccacccttccaagactcc
aagtattacatttctctgacacttcctctagcaatggctattctgcgcctggataccaac
cccagcaaagtgcttgataactggtggtctcaagtgtgcccaagatacttcctcaggctc
gtggacctctacaaaggtgcagtggtgtacctcctcagtggaaggaagacactgctgatc
ccagtcctgttcagcagctacattacagctgctctcaggcttctggagaagctccacaag
gtgaatcagaaggttaaacacgtggaatatgataagttttatatccctgagatttccagc
ttggtggacattcaggaggattatctcatgtggttcttgcaccaggctggaatgaaagta
aggccatctatcatgcaggatgctgtgactctctgctcttaccctttcatcttcgatgct
caagctaagaccaagatgttacagacagatgcagaattacagatgcaggttgcaataaat
ggtgcaaatttgcagaatgtcttcatgcttctcaccctggagcctctgctggccagaagc
cctttcctggtacttcatgttcgcaggagtaatttagttggtgatgctttaagggagttg
agcatccattcagacattgatttgaaaaaacctctcaaagtgatctttgatggtgaggaa
gctgttgatgctggaggagtgacaaaggaatttttcctccttttgttaaaagaactactc
aaccctatctatggcatgttcacttactacccagagtcaaacctgctgtggttttcagac
acgtgttttgtagaacacaactggtttcacttgattggcatcatatgtggtcttgcaata
tacaatttcacagtggtagaccttcactttcccttggctctgtacaaaaaactcttgaac
gtgaagccctgcctagaggatttgaaggagctatcccctacggaaggaaggagtctccaa
caacttttagattaccctggggaagatgtggaggagacgttctgtttgaactttacaatc
tgcagggaaagctatggtgtgacagagcagaagaacctgattgaagatggagataaaatc
ctggtgcagaaggacaacagggaagaatttgttgaagcctacgtaaattacatcttcaac
ctctccatccaagagtggtacacggccttttctactggcttcctcaaagtgtgtggtggg
aaggtcctggaactcttccagcccacagagctcagggccatgatagttggaaacagtaac
tacaactgggaggaactggaggagagcgctgtctataagggagactacacggccacacac
ccaactgtgagaatgttctgggagactttccatgcatttcccttggaaaagaagaagaaa
tttctcttgttcctgacgggcagcgaccgcattcccatctacggcatgtccagcctgcgc
atcatcatccagtcgacgcccagcggggagcagtacctgcccgtggctcacacctgctac
aacctgctggacctgcccaagtacagcagcaaggaggtcctcagcgcccgcctcgtgcag
gccatcgaccactacgagggcttcagcttggcctga
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