Aphelocoma coerulescens (scrub jay): 138109588
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Entry
138109588 CDS
T10543
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04010
MAPK signaling pathway
acoe04210
Apoptosis
acoe04218
Cellular senescence
acoe04620
Toll-like receptor signaling pathway
acoe04621
NOD-like receptor signaling pathway
acoe04622
RIG-I-like receptor signaling pathway
acoe04623
Cytosolic DNA-sensing pathway
acoe04625
C-type lectin receptor signaling pathway
acoe04920
Adipocytokine signaling pathway
acoe05132
Salmonella infection
acoe05164
Influenza A
acoe05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
138109588 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
138109588 (NFKB1)
04218 Cellular senescence
138109588 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
138109588 (NFKB1)
04621 NOD-like receptor signaling pathway
138109588 (NFKB1)
04622 RIG-I-like receptor signaling pathway
138109588 (NFKB1)
04623 Cytosolic DNA-sensing pathway
138109588 (NFKB1)
04625 C-type lectin receptor signaling pathway
138109588 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
138109588 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
138109588 (NFKB1)
05168 Herpes simplex virus 1 infection
138109588 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
138109588 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138109588 (NFKB1)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
138109588 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
138109588
NCBI-ProteinID:
XP_068869362
LinkDB
All DBs
Position
4:27708907..27766811
Genome browser
AA seq
981 aa
AA seq
DB search
MAEDSYIMGVSDPQMFAVDQFMGMNALFNSTNYITSDLPLRTADGPYLQIIEQPKQRGFR
FRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVGK
FCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVLETLETRMIDACKKGYNPGLLVHPELS
YLQAEGCGDRQLTEREREIIRQAAIQQTKEMDLSVVRLMFTAFLPDSNGSFTRKLDPVIS
DAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWEG
FGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKDK
EEVQRKRQKLMPNFSDGYGGGSGAGGGGMYGGTGGGAGSGFSFPSYGYSAFGGMHFHPGT
TKSNAGMKHEGQSNCTAEQDRKSSDKQSDKWDMKHDVKVETMERTECRTSAVNEEKEDSV
SSCKTEVSEADCRWQGALFLEKAMQLARRHCNALFDYAVTGDVKMLLAAQRHLTAVQDDN
GDNVLHLAIIHLHTDLVKNLLEVMPDLNYKDIINMRNDLYQTPLHLAVITKQAKVVEDLL
KAGADVSLLDRHGNSVLHLAATEGDDKILSLLLKHERVSPMVNLPNGEGLSAIHMAVMAN
SMSCLKQLIAAGVNVNAQEQKSGRTALHLAVEQENIPLAGCLLLEGDADVDSTTYDGTTP
LHIAAGRGSTKLAAVLKAAGANPHIENFEPLFDLDDVKDDQDDEGIVPGTTPLDMAANCE
VYDILNGKPYESAEVLEDLLTQGHLRELSESSKMQLYKLLELPDPTKNWSTLAQKLGLGI
LNNAFRLSPSPSKTLLDNYEVSGGTVQELIAALRQMDHTEAIEIIQEALSSSRRLSPLED
SSAKALPSSSPLTFANGETGELYNSRFQDPESTCDSGVETSFRKLSFTYSDSLNSKSSLT
LGKMALGYGHESSGQSNYIAD
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagattcctatattatgggagtatctgatccccaaatgtttgcagtggatcag
ttcatgggaatgaatgcattatttaatagtacaaattacatcacttcagacttaccacta
cgaacagcagatggaccatatcttcaaatcatagaacagccaaaacagaggggatttcgt
ttccgatacgtatgcgaagggccttcgcacggtggacttcctggtgcttctagtgaaaag
aacaaaaaatcataccctcaggtcaaaatctgcaactatgttggacctgcaaaagtaatt
gtccagttagtaacgaatgggaaatacgtccacttacacgctcacagcttggtgggtaaa
ttctgcgaagacggagtgtgcacggttaacgcaggacccaaggacatggttgtagggttt
gcaaatcttggaatacttcatgtcacgaagaagaaagtgttagagactctggaaacgcgc
atgatagatgcttgcaagaagggatacaacccgggactcctggtgcatccggagctcagc
tatctgcaggcagaaggatgtggagacaggcagctaactgaacgggagagagaaatcatc
cgccaggcagccatccagcagaccaaggaaatggatctcagcgtggtgcggctcatgttc
acagcctttcttcctgacagcaacggcagcttcacacggaaacttgatcccgttatatcg
gatgcaatatatgacagcaaagctcccaatgcctccaacctaaaaattgtaagaatggac
agaacagcagggtgtgtgacaggaggggaagagatttacctgctgtgtgacaaggttcag
aaagatgatattcagatacgtttctatgaagaggatgagaatggtggtatgtgggaaggc
tttggagatttttctcctacagatgtacatagacagtttgctattgtgttcaaaacaccc
aagtaccgagatgtcaatatcacaaagccagcatctgtatttgtacaactgcgtaggaaa
tctgatctagaaacaagcgaaccaaagccttttctctactatccggaaatcaaagataaa
gaagaagtgcaaaggaaacgacagaaactcatgccaaacttctccgatggctatggtgga
ggcagtggcgccggaggtggtggcatgtatgggggaacaggtggtggtgctggctctggg
ttcagttttccttcatacggatactctgcttttggagggatgcatttccaccctggcaca
acaaagtccaatgctggcatgaaacatgaaggtcaatcaaattgtacagctgaacaagac
aggaagagctctgataaacaaagtgacaaatgggacatgaaacatgatgtgaaggtggaa
accatggagaggactgagtgcagaacatctgctgttaatgaggagaaggaggattctgtt
tcttcctgtaaaactgaagtaagcgaagcagactgcaggtggcagggtgctctgttcctg
gagaaggccatgcagcttgccaggcgtcactgcaatgctctcttcgattatgccgtaact
ggagatgtgaagatgctgttggcagctcagcgccatctcactgctgtccaggatgataat
ggagacaatgtccttcatttagcaattatccaccttcatactgacctggtgaaaaacctc
ttggaagtgatgcccgatttgaattacaaggacatcattaacatgagaaatgacctctat
cagactcccctgcacctggcagtaatcacaaagcaggcaaaggtggtggaagacttgctg
aaggctggagcagatgtcagccttctggatcgccacggcaattctgtcttacatttagct
gctactgaaggagatgacaagattctgagtctactcctcaagcatgagagggtgtctccg
atggtcaacctccccaatggagaaggtctcagtgcaattcacatggcagtgatggcaaat
agcatgtcctgcctcaaacagctgattgctgctggagttaatgtcaatgctcaggaacaa
aaatctggacgaaccgcattgcatttggctgttgaacaagagaacatccctttggcaggc
tgccttttgcttgagggtgatgcagatgtggacagcactacatatgatgggacaactcca
cttcacatagcagctggaaggggctcaacaaaattggcagcagttctcaaagcagcaggt
gcaaatcctcacattgagaactttgagccattgtttgatctagatgatgtgaaagatgat
caagatgacgaagggattgtgcctggaacaacaccactggatatggcagccaattgtgag
gtgtatgacatattgaatggcaaaccctatgagtcagcagaggttttggaggacttactg
acacaaggacatttgagagagctgagtgagagttccaagatgcagctttacaaactattg
gaattgcctgatccgaccaaaaactggtccaccctagcacaaaaactgggtcttggcata
cttaataatgccttcaggttgagcccttccccatcgaaaactctgctggataactatgag
gtttctggtggtacagttcaggagctcatcgctgctttgagacagatggatcacacagaa
gccatagagataattcaggaagcactatccagctcacgcagactgtctcccctggaggac
agttcagcaaaagctcttccctcatcatcaccactcacctttgcaaatggagagacaggt
gagctctataatagcagatttcaagaccctgaaagcacatgtgacagcggtgtggagacc
tccttccgcaagctgagtttcacttattcagactctctgaacagcaagtcctcactaaca
cttggcaaaatggccctgggctatggacatgaaagttcagggcaaagcaattatatagct
gactag
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