Aphelocoma coerulescens (scrub jay): 138109842
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Entry
138109842 CDS
T10543
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04010
MAPK signaling pathway
acoe04020
Calcium signaling pathway
acoe04144
Endocytosis
acoe04510
Focal adhesion
acoe04540
Gap junction
acoe04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
138109842 (PDGFRA)
04020 Calcium signaling pathway
138109842 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138109842 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
138109842 (PDGFRA)
04540 Gap junction
138109842 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
138109842 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
acoe01001
]
138109842 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
acoe04090
]
138109842 (PDGFRA)
Enzymes [BR:
acoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
138109842 (PDGFRA)
Protein kinases [BR:
acoe01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
138109842 (PDGFRA)
CD molecules [BR:
acoe04090
]
Proteins
138109842 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
Ig_6
Kinase-like
Motif
Other DBs
NCBI-GeneID:
138109842
NCBI-ProteinID:
XP_068870193
LinkDB
All DBs
Position
4:complement(51749948..51785147)
Genome browser
AA seq
1087 aa
AA seq
DB search
MGTSPRTFLILGCFLTGPFITFCQLPLPTIVPNRNEMVVQLNSNFTLKCSGDSEVSWQYP
VTEGNHRIDIRHEENNSGLFVTVLEVGNASAAHTGLYVCYYNHTQVEDGEVEGKDIYIYV
PDPDMPFVPSIPEDQFILVEEGDPTVIPCRTSDPDAQVTLVNSLDKSVYALYDTKQGFIG
NFPAGSYTCKTMVKGVEFKSDEFLIYIIRATSQLPVEIEALKTVYKTGETIVVTCVVFDN
EVVNLQWNYPGKVKEKGLIKLDDIKVPSQKLVYTLTIPEASVKDTGDYECTARHATKEVK
ENKKVVITVHDKGFVHLEPQFSPLEAVNLHEVKNFVVDVQAYPAPKMYWLKDNVTLIENL
TEIVTSSNRVQETRFQSILKLIRAKEEDSGYYTLVAENEDEIKRYTFSLLIQVPALISAL
VDDHHGSAGGQTVRCLAEGTPLPDVEWLVCKDIKKCSNDTSWTLLTNNISDIHMEAHLDE
KNMVESQVTFQKVEETLAVRCVARNDLGAVTRELKLVAPTLRSELTVAAAVLVLLVIVII
SLIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILG
SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL
LGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLNRHPEKPKKDLDIFGMNPADESTRSY
VILSFENTGEYMDMKQADTTQYVPMLERKEGSKYSDIQRSVYDRPASYKKKSMTESEVKN
LLSDDSSEGLSLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLA
RDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMM
VDSTFYNKIKSGYRMAKPDHATNEVYEIMVKCWNSEPEKRPSFYHLSEIVESLLPGEYKK
SYEKIHLDFLKSDHPAVTRMRGDCDNAYIGVTYKNEDKLKDRESGFDEQRLSADSGYIIP
LPDIDPVSEDELGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDDIGIDSSD
LVEDSFL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgggtacttccccacggacgttcctgatcctgggatgttttctcacaggaccattcata
acattttgccagcttcctctgccaactattgttcccaataggaacgaaatggtggtacag
ctgaattccaatttcacactcaaatgctctggagacagtgaagtgagctggcagtaccca
gtgactgagggaaaccacaggatagacattagacacgaagaaaacaacagtggcctcttc
gtgacagtgctggaagtaggaaatgcatcggcggctcatacaggcttgtatgtttgctat
tataaccacacacaagtggaggatggggaagtggaagggaaggacatctacatctatgtg
cctgatccagacatgccttttgttccttctataccagaagaccagttcatcttagtagaa
gaaggtgatcccacagttatcccgtgtcggacaagtgacccagatgctcaagtgacttta
gttaacagtttagacaagtctgtgtatgctttatatgacaccaaacaaggcttcataggg
aattttcctgcgggctcatacacatgcaaaacaatggttaaaggcgtggagttcaagtct
gatgagttcctcatctatattataagagctacttcacagctgcctgttgaaattgaagct
cttaaaactgtctacaaaacaggcgagaccatcgtagtaacttgtgtggtctttgacaat
gaggtggttaatttacagtggaattatcctgggaaagtgaaagaaaaaggtctgataaaa
cttgatgatatcaaagtcccatcgcagaagctggtttacaccttgaccattcctgaggca
tcagtgaaagacacaggagattatgaatgtactgctcggcatgcaaccaaggaggttaag
gaaaataagaaagtagtcattacagttcatgacaaaggctttgttcacctggagcctcag
tttagccctctagaagctgtcaacctgcatgaagtcaaaaactttgttgttgatgtgcag
gcttacccagcaccaaaaatgtactggttgaaggataatgtgactctgattgaaaatctt
acagagattgttactagttccaacagagtccaggaaacaaggtttcagagtattttaaaa
ttgatacgggccaaggaggaagacagtggatactacactttggttgctgaaaacgaagat
gagattaaaagatacaccttctcattgctaatacaagttccagctctgatctcagccctt
gtggatgatcaccatggctctgcaggtgggcagacagtgagatgcttggcagaggggacc
ccacttcccgatgtggaatggctggtttgcaaggacattaaaaagtgcagcaatgacacc
tcatggactcttttgactaacaatatctctgatattcacatggaagcccacctggatgag
aaaaatatggtggaaagccaggtgaccttccagaaggtagaggaaaccctggctgtgcga
tgtgtggcaaggaatgaccttggcgctgttactcgagaactgaagcttgtggctcccacc
ctgagatcagagctaacggtggctgctgctgtcttagtgctgttagtgattgtgataatt
tcactgattgtcctggtcatcatatggaaacagaagccgaggtatgagattagatggaga
gtcattgagtctatcagccctgatggccacgagtatatttatgtggacccaatgcaactg
ccttatgactccagatgggagtttcctcgagatgggttagtgcttggtcggatccttggt
tcgggtgcatttggaaaagtagttgaagggactgcatatggattgagtcgctctcaacca
gtgatgaaagtagctgtgaaaatgctgaaacctacagctagatccagtgaaaaacaggca
ctcatgtctgaactgaagataatgacacatcttggcccccacctgaatattgtaaatctg
cttggagcttgtacgaaatcaggtcctatttacatcattacggaatactgtttttatggt
gatttggtgaactacttgcataagaacagggacaacttcctgaaccgacacccagaaaag
ccaaaaaaagatttggatatctttgggatgaaccctgctgatgaaagcacaagaagttat
gtgatattatcgtttgaaaacactggagaatacatggacatgaaacaagctgataccact
cagtatgtgccaatgctggagaggaaggagggctctaaatactctgatattcagagatct
gtgtatgatcggcctgcttcatataagaagaaatccatgacagaatcagaagtcaaaaac
cttctttcagatgacagttcagagggcctcagcctactggatttgctgagcttcacctac
caggttgcacggggaatggaattcttggcttctaaaaattgtgtgcatcgtgacttggcc
gctcgtaatgtcctcctggctcaaggaaaaattgtgaagatctgtgactttgggctggct
agagacatcatgcatgattccaactatgtctccaagggcagcactttcctcccagtaaaa
tggatggcacctgaaagtatttttgacaacctgtacacaacattaagtgatgtctggtct
tacggcattctgctgtgggaaatattttctcttggtggcacaccgtatcctggcatgatg
gtcgattccactttctacaataagatcaagagtggataccgaatggccaaacctgatcat
gctaccaatgaagtatatgagattatggtgaagtgctggaacagtgaaccagagaagaga
ccttctttctaccatttgagtgaaattgtggagagtttgttgcctggagagtacaaaaag
agctatgagaagattcatctggacttcctgaaaagtgatcacccagctgtcacacgcatg
agaggggattgtgacaatgcttacattggtgtaacctacaagaacgaagacaagctaaag
gacagggagagtggatttgatgagcagaggctgagcgctgacagtggatacatcattccc
ctgcctgacattgaccctgtttctgaagatgagcttggcaaaagaaacagacacagttca
cagacatctgaagaaagtgccattgaaactggttccagcagctctaccttcatcaagaga
gaggacgagaccattgaggacattgacatgatggatgacattgggatcgactcctcagac
ctggtggaggacagcttcctgtaa
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