Aphelocoma coerulescens (scrub jay): 138109847
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Entry
138109847 CDS
T10543
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138109847 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoe03019
]
138109847 (FIP1L1)
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
138109847 (FIP1L1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
138109847
NCBI-ProteinID:
XP_068870211
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All DBs
Position
4:complement(52109539..52148833)
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AA seq
551 aa
AA seq
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MSTGEAERLSADADGAAGDEEEEWLYGDENEAERPEEEKSSAPPPPGSEEEAAENGVVKT
KVAEAEDDSDSDSDDDEDDVQVTIGDIKTGASQFSYGAAPVNLNIKAGGRAYGSSGAKVK
GLDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRM
GLEILPVTSTTNKITAEDKAMEVRPSAEILDGRYHLFKVQQGRTGNLEKELAVQSTKPDF
TSPPALFKSGIPANRRISGTIDVIGQTITISRVEGRRRANENSNIQVLSERSNPEVDSFT
KPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSLI
PTIDSGHSSGYDGRSVRAFSYGSVTFPHPAGSAPSWSSLLDTSKQWDYYARREKDRERER
ERSRDRDRDRDRDRDRDRTRDRERDRDHSPSSSAFNSDEERYRYRDYAERGYDRHRTSRE
KEDRHRDRRHREKEETRHKSSRSNSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASGEPAP
EQENTEAAPVE
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggcgaggcggagcggctgtcggcggacgccgatggggccgccggggacgag
gaggaggagtggctctatggcgatgaaaatgaagcagagagaccagaggaagaaaaatct
agtgctccacccccacctggaagtgaagaggaagctgcagaaaatggcgttgtgaaaacg
aaggtggcagaggctgaggatgacagtgatagtgatagtgatgatgatgaagatgatgtt
caagtcaccataggggatattaagacaggagcttcacaatttagttatggagcagcacct
gtgaatctcaatattaaggcaggaggacgagcttatggatcttctggtgcaaaagttaaa
ggactggatctagatgcaccagggagtattaatggtgtgccacttctggaagtagattta
gattcttttgaggataaaccttggagaaagccaggggctgatctctcagattattttaat
tatggcttcaatgaagatacctggaaagcttactgtgaaaaacaaaagagaatacgaatg
ggtcttgaaattttgccagttacctcaaccacaaataaaattacggctgaagacaaagct
atggaagtaagaccaagtgcagagattctcgatggcagataccatctttttaaggtacag
cagggcagaactggaaatttggagaaagagttggctgtgcagtcgaccaaacctgatttc
acatctcctcctgccttattcaaatcaggaattccagcaaacaggcggatatctggcaca
atagatgtgattggacagaccatcactatcagcagggtggaaggacgacggcgtgctaat
gaaaacagcaacatacaggttctttcagaacgctctaatcctgaagtagacagttttacc
aagccacctccatttttccctccaggagctccacctactcaccttccaccacctcctttc
ctcccaccccctccaactgtcagtactgctccacctctgattcccccaccaggtatacca
ataacagtgccaccaccaggttttccaccaccacctggcggtcctccaccttccctcata
cccacaatagacagtggacattcttctggctatgatggtcgttctgttcgtgcattttca
tatggcagtgtcacctttccacaccctgcaggttctgcaccctcatggtctagtcttctg
gacaccagcaaacagtgggactactatgcacgaagagagaaggatagggaacgtgagaga
gagagatcccgagatcgggatcgcgaccgggatcgagacagagatcgagaccgtaccaga
gacagggaaagggaccgagatcacagtccgtcttcaagtgcattcaacagtgatgaagaa
cgctacagataccgagactatgcagagaggggctacgaccgccataggacaagtagagag
aaggaagacagacacagagacaggagacacagagagaaagaagagactcgacacaagtca
tctcgaagtaacagcagacgtcgtcacgacagtgaagaaggggatagccacagaaggcac
aaacacaagaagtccaaaagaagcaaagaaggaaaagaagccagtggtgaacctgctcct
gaacaggaaaacactgaagctgcccctgtggaatag
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