Aphelocoma coerulescens (scrub jay): 138109880
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Entry
138109880 CDS
T10543
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
Domain-containing proteins not elsewhere classified [BR:
acoe04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
138109880 (LIMCH1)
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Other DBs
NCBI-GeneID:
138109880
NCBI-ProteinID:
XP_068870310
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Position
4:complement(55198274..55374839)
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AA seq
1336 aa
AA seq
DB search
MASPGLELGEVQPPPEPPQPELAFTEAQKWIEQVTGRSFGEKDFRSGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNIILFLRGCKELGLKESQLFDPGDLQDTSNRVTIKNIDYS
RKLKNVLVTIYWLGKAANSCTSYSGSTLNLKEFEGFLAQMRKETEDIDSPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSQQTPSPDVVLRGSSDGRGSDSETDLPHR
KMPDVKKDDMLARRTSHGEPKSAVPFNQYLPNKSNQTFYVPAPLRKKKAEREEYRKSWST
ATSPLGDRPFSKPHPETIEEELNEASGLCEKEKVASMAPEASSLKNQLGLNQSEKNSIDQ
SPSCSAKETSAPKGKDEEEIRKLRRLEQAGIKVMSAAQRYGSTVTREVKQEQLEIPQLQS
DGTESSMKFPDPQRDDMLARRTGAFLKQPGPSVKQFLPMPFSKQQNKQGTATELEKKTTR
PEKCPQVYTNSSGKPATEPLQEQQHGQEKDSLPPTGQEIISTAQVGEDGHNEVHLGQTSK
LPEVPEENKMETFPSKDERLQIFGLRTPVSDDAESVSMFDMRCEEEAVAQPHSKARHEKL
QNIHNQLKEDETRWQDDLARWKSRRRSASQDLIKKEAERKKMERLLAGDGTNERRKSIKT
YREIVEEKERRERELHEAYKNAKTQEEAESILQQYIERFTISEAVLERLQMPKILERSHS
VEPNSPLKDPNPLRYLRQQSLPAPKFTATIEATIVPTTELEPSSSAGRTSPSKSVSKAVP
MLTPKPYSQPKNTQEVLKNFKVDGKVSMNGENVNGMEEKDKECTTVIFTPSPARSLKFDG
VARGDRPPVELKKDPPSVELSLQRPATQSVHKEPTASPVELDGADSLQAEPSPSSAAPAP
AACPSPGLDQKQFKSTAACASPVVKRLEFLPSPVSSEETASSEKEVKKAEIEQQKEAELP
PAQEVKKAKALEEKGSVVLPFLKKLPETSQVTLHNSGLQADSDSGDKSNRFNFWSWDPEE
ERKRQERWQHEQERLLQEKYQKEQDKLKEEWEKAQREVEEEERRYYEEERKIIEDTVVPF
IVSSNSAELLSSSSSTTEGNKTVNSTDSNSFPEDGKQKEGTKQKKLLWEQDSMPSLKSKE
NELWQEKRSGNKVLSGYPETGILKGGSEQEHHMPVMERSSPARLNLPLTQDISWNQQLLT
KQSPQCTEDSRQRPFLGQTVGQQPSSTGEAKRAGYHENFRSGPSSPCSPAALSQSPNRSV
SGKKLCSTCGLPLGKGAAMIIETLGLYFHIQCFRCGICKGQLGDAASGTDVRIRNGLLNC
NDCYIRSRTAGQPTTL
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcctggactggagctgggagaggttcagcctcctcccgagcccccccagcct
gagctggccttcaccgaggctcagaagtggatcgagcaagtgacaggcagaagttttggt
gagaaagattttcgttccggattagaaaacggcattcttctgtgtgagttgctgaatgca
ataaagccgggattggtaaaaaagatcaatagactaccgacccccattgcaggtttggat
aatatcatattattcttaagaggctgcaaagaactgggacttaaagagtctcagcttttt
gatcctggtgatctgcaggacacgtcaaacagagtaaccatcaagaacattgactatagt
aggaagctgaaaaatgtattagtcaccatttattggctagggaaagcagcaaacagctgc
acgtcgtatagtggatcaaccctgaacctgaaggagtttgaaggcttcctggcacaaatg
agaaaggaaacagaggatattgatagccccaagcgcagcattcgtgacagtggctatata
gactgctgggactccgagcgcagcgattccctctccccgcctcgccacggcagagatgat
tcctttgacagtctggactcctttggctcccgctcgcagcagacaccgtctccagatgta
gtgctcagagggagcagtgatgggagaggaagtgactcagaaactgacctgccacacaga
aagatgccagatgtgaaaaaagatgatatgttggcaaggcggacctcacacggtgaacct
aaatcagctgtgccttttaaccagtacctcccaaacaagagtaatcagactttctatgta
cctgctccacttcggaaaaagaaagctgaacgagaggagtaccgaaagagctggagcaca
gcgacttcaccactaggagacagacctttcagcaaaccccaccctgaaaccatagaagaa
gaactgaatgaagcgtcaggactgtgtgaaaaggagaaagtggcctccatggctcctgaa
gcaagctcccttaaaaatcaattaggtttgaatcaaagtgaaaaaaactccatagaccag
tctccttcatgtagtgcaaaagaaacatcggcacccaaggggaaagatgaagaagagatc
agaaagttaagaagactggaacaagctggtattaaggtcatgtcagcagcccagcgctat
ggcagtactgtcacacgagaagtgaaacaagaacagcttgaaatccctcagctgcagagt
gatggaacagaaagcagcatgaaatttccagacccacaaagagatgacatgttagccaga
agaactggagcttttcttaaacaacctgggcccagtgttaagcagttccttcccatgcca
ttttcaaagcagcagaataagcagggcacagctaccgaacttgagaagaaaaccacgagg
cctgaaaaatgtccacaagtctacactaacagttctggaaaacctgcaacagaaccactg
caagaacagcagcatgggcaggagaaggacagtctcccacctacaggacaagagattatt
agtactgcccaagtgggtgaagatggtcacaatgaagtccaccttggtcaaacatctaag
cttccggaggttcctgaggaaaacaaaatggaaacatttccatccaaggatgagcgtctg
caaatattcggcctcagaactcctgtgtctgatgacgcagagagtgtgagtatgtttgac
atgagatgtgaagaagaagctgtggctcagcctcatagcaaagctcgccatgagaagctg
cagaacatacacaaccagctgaaagaggacgagaccagatggcaagatgacctggctcgg
tggaagagtcgtcgaaggagcgcttcacaggatttgataaaaaaggaagctgagagaaag
aaaatggagaggttattggctggagatggaacgaacgagcgcagaaaaagcatcaaaacc
taccgagaaattgtggaggagaaagagaggagggagcgggagcttcatgaggcatacaag
aatgcaaagacacaggaggaggctgagagcatcctccagcagtacatcgaaagattcact
atcagtgaagctgtccttgagcgtttgcagatgccaaaaattctggaaagaagccattca
gtggaaccaaattccccactgaaagacccaaatcctctgagatatttaaggcaacagtca
cttcctgctccaaaattcactgccacaattgaagcaaccattgttcccaccactgaacta
gagcccagcagttcagcaggacgcacatctcccagcaaaagtgtctccaaggctgtgcct
atgctgacacccaagccttactcacaacccaaaaatacacaggaagttttaaagaacttt
aaggtagatggaaaagtcagcatgaatggagaaaatgtcaacggcatggaagaaaaggat
aaagaatgtacaacagtaatatttactccttcaccagccagatctctgaaatttgacgga
gtagccagaggggacaggcctccggtagagttgaagaaggaccccccaagtgttgagctc
agtttacagaggcctgccactcagagtgtgcacaaagagccaacagcctccccggtggaa
ctggatggagctgacagcctgcaagccgagcccagccccagcagtgcggcacctgccccc
gcagcgtgcccatccccaggtttagatcaaaagcaattcaagtcaactgcagcttgtgcc
agccctgttgtgaagagattagaatttcttcccagtcctgtctcttcagaggaaactgct
tcaagcgagaaagaagtgaaaaaagctgaaatagagcagcagaaggaagcagagctccct
cctgcacaggaggtgaagaaagcaaaagccctggaagaaaaggggagtgtagtgctgccg
tttttaaagaaactacccgagaccagccaagttactctgcataactctggtctacaagct
gattctgatagtggcgacaaatcaaatcgtttcaatttttggtcctgggatccagaagaa
gagcgaaagcgccaggaaaggtggcagcatgagcaagaacgcttgcttcaggagaagtat
cagaaggagcaggacaagctgaaagaggaatgggaaaaggcccagagggaagttgaagag
gaggagcgtagatactatgaggaggaacgcaagataattgaggatactgtagttccattc
attgtttcttcaaactctgctgagctcctctcctcttcttcctctaccactgaaggaaac
aagacagtgaactcaactgattcaaacagctttccagaggacggcaaacaaaaagaaggt
acaaagcagaaaaagctgctctgggagcaggacagtatgccatctctgaagagcaaggaa
aacgaactctggcaagaaaagaggagtggaaataaagtgctctcaggatacccagaaact
ggtatcttgaaaggaggaagtgaacaggagcaccacatgccggtgatggagcgcagctca
cctgccaggctgaatctgccactgactcaggatatctcctggaatcagcagctgctgaca
aagcaatctccacagtgcacagaggacagtcggcagagaccattcctgggccagactgtg
ggacagcaaccgagctccacaggggaagcaaagagggcaggctatcatgagaacttccga
tctgggccgtcatctccctgctctcctgctgctctgagtcagtcacccaacaggtctgtc
agtgggaagaagctttgctctacctgtggtctccctcttggaaaaggagctgccatgatt
attgaaacacttgggctttatttccatattcagtgcttcaggtgtggcatttgcaaggga
cagctgggagatgcagcgagtggcacagatgtcaggattagaaatggtcttcttaactgc
aatgattgttatatccgatccagaactgctggacagccaactacattgtga
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