KEGG   Aphelocoma coerulescens (scrub jay): 138109896
Entry
138109896         CDS       T10543                                 
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
  KO
K10754  replication factor C subunit 1
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe03030  DNA replication
acoe03410  Base excision repair
acoe03420  Nucleotide excision repair
acoe03430  Mismatch repair
Brite
DNA replication proteins [BR:acoe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    138109896 (RFC1)
DNA repair and recombination proteins [BR:acoe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     138109896 (RFC1)
SSDB
Other DBs
NCBI-GeneID: 138109896
NCBI-ProteinID: XP_068870355
LinkDB
Position
4:56118197..56152968
AA seq 1313 aa
MGENTFRGTRARRSLHSQNGRDITCLWPGNAFQCCADPGLAARLFWGLRLPQWPKKRRKS
WRPGTALLSVFTQQFSLPARLLCRRPSSTRSSILSCCCSRRRERLNLRRGEGPLPRAHER
GQGRGGRGRECVGGNRAPLGSTAMAPAPARGTPRPPPSPARRGRDGSAARRAAGVGAKAG
AWRRERPARHRDRAAAMDIRKFFGVVPPGKRQECESVKKSERIKNGEGPSSGKKREKEAK
VNNSPSEDDSKQKRTKKKRRIIYDSDSEEEVSSVKKSKKSPEKKAATSKLGKVLKQDPVV
YISETDEEDDFVNRRNSLKPKENGTSAAGCPGTNTVKKGEVKPQAKSKPLSPVKQTPTSA
LDYFGTTSVQRSEKKLVASKRKEPSQSRDSTLDDEAIARQLQLEEDSELERQLHEDEEFA
RTLAMLDETPQKKKARKDTEGEQTVLSISSSPNRTAGYKQSERVKATDSAGAAKNYSAKR
QNKSEQLKEIAEKERGAQNSLSREKAALGKEEKTPPKKEKVSPKKTESISPEDSEKKRNN
YQAYRSFLNREGPKALGSKEIPQGAENCLEGLTFVITGVLECIERDEAKSLIERYGGKVT
GNVSKKTNYLVMGRDCGQSKREKASTLGTKVIDEDGLFDLIRTMPGKKSKYELAAETEAE
KVESRPKKTPQKTEAGKRNFSPYKREANNKYKSTPEKGDNARSAKRETTAIRKLTDFKHH
TVGEKEAPKPKGNLVSEVNEDGTEKLLWVDKYKPVSLKAIIGQQGEQSCANKLLRWLRNW
HKNILEDGQAKPNKTGSKDDGTSFKAALLSGPPGVGKTTTAALVCKELGYSYVELNASDT
RSKNSLKEVVAESLNNTSIKDFYSGASSSVSGKHVLIMDEVDGMAGNEDRGGIQELIALI
RHTKIPIICMCNDRNHPKIRSLVHYCLDLRFQRPRLEQIKGAMMSIAFKEGLKIPPPAMQ
EIILAANHDIRQVLHNLNMWCARDKSLTYDEAKTDASRAKKDIKLGPFDVVRKVFTTGEE
AARMSLIDKSDLFFHDYSLAPLFVQENYVHVKPAAAGGNLKKHLVLLSRAADSICDGDIV
DKQIRSKQNWNLLPTQAIYASVLPGELMRGYMSQFPVFPSWLGKFSSTGKHDRIIQELAM
HMSLRTQTCKRTVNMEYLSYLRDALVQPLKDFGADGVQQAITFMDSYCLMKEDVENIMEI
STWGGKPSPFSKLDPKVKGALTRAYNKEAHLTPYSLSSVKASKRQSGSAVTLDLSEDLNV
EEVQSDEDEQDTVDSDAMIKQKKVKSSKLTKREKNEETTKKEGKRKEKTRHLE
NT seq 3942 nt   +upstreamnt  +downstreamnt
atgggagaaaataccttcagaggaaccagagcccgacgctctctgcacagccagaatgga
agggacatcacatgtttatggccaggaaatgcctttcagtgctgcgctgacccgggcctg
gctgcccgcctattttgggggctgcgtttgcctcagtggcctaaaaagagacgaaaatca
tggaggcctggcactgctctcttgtctgttttcacccagcagttcagcctgccggctcgc
ctgctctgccggaggccctcgagcacacgcagctccattttgagctgctgctgctcgagg
cggcgggagcggttaaacctccgccgcggggaggggccgctgccgcgagcacacgaacgc
ggacaggggcgagggggccggggccgggagtgtgttggaggcaaccgggctcccctggga
tccaccgctatggccccggccccggcccggggtacgccccggccgccccccagccccgcc
cgtcgcggccgtgacggcagcgccgcgcgccgggccgcgggagttggcgcgaaggcggga
gcatggaggcgggagcgtcctgctaggcacagggaccgcgccgccgccatggatatccgg
aaattctttggtgttgtaccacctggaaagcgccaagaatgtgagtctgtgaaaaagagt
gaaagaattaaaaatggtgaaggaccctcgagtgggaagaaaagggaaaaggaggctaag
gtgaataattcacccagtgaagatgattccaaacaaaagcggacaaaaaagaagagaaga
ataatctatgattcagattcagaagaggaggtgtcgtcagtgaaaaaatccaagaagtca
cctgagaaaaaagcagctacttcaaaacttggtaaagttctaaagcaggatcctgttgtt
tatatttcagagacagatgaggaggatgattttgtcaatagaagaaattccctgaaaccg
aaggagaatgggacgtcagccgctggctgtccaggaacaaatactgtcaaaaaaggagag
gtcaaaccacaagctaaaagcaaacccctgtctccagtgaaacagactcccacctctgca
cttgattactttgggacaacgagtgtccaacggtcagaaaagaaactggtagcaagtaaa
aggaaagagccttcacaaagcagagatagcacactagatgatgaggccattgctaggcaa
ctgcagcttgaagaagattcagagctggagagacagctgcatgaagatgaagaatttgct
agaactctggccatgttggatgaaacaccgcagaagaaaaaggctcggaaagatacagaa
ggagagcaaacagtactgagcatcagtagcagccctaataggacagcaggatataagcag
tcagaaagagtgaaggcaacagactcagctggtgcagccaagaattattctgcaaagcgt
caaaataaatctgaacagttgaaagagattgctgaaaaagaaagaggtgctcaaaattca
ctatcaagagaaaaagcggctttggggaaagaagagaagacaccaccaaagaaggagaaa
gtctctcccaagaagactgaatctataagtcctgaggactctgaaaagaagcgaaacaac
taccaagcttaccgaagcttccttaatcgtgagggtccgaaagcactaggttccaaagag
atacctcagggagctgaaaactgcttggaaggcctgacatttgtaattacgggtgttctg
gagtgcattgaaagagatgaggccaagtctctgattgaacgttacggaggcaaagtaacc
ggcaatgtcagcaagaagacaaattacctggtgatggggcgagactgcggccagtccaaa
cgtgagaaggcatcaactttaggtacaaaagttattgatgaggatggtctgtttgatctt
attcgaactatgccaggcaaaaagtccaaatatgagctggcagctgaaacagaggcagag
aaagtggagtcaagacctaaaaagacacctcagaaaactgaagctggaaaaaggaatttt
agcccctataaaagggaagctaataataagtacaaatctactcctgaaaaaggagataat
gccagatctgccaagagagaaaccactgctattcggaagctaacggactttaaacatcac
acagtaggggagaaagaagccccaaaacctaaggggaacttggtttctgaggttaatgaa
gatggtacagagaaattgttatgggtagataaatacaagcctgtatctcttaaggcaatt
attggacagcagggtgagcaaagctgtgccaataaactgctccgatggctcagaaattgg
cacaagaatatcttggaagatggacaagcaaaacccaataaaactggaagcaaagatgat
gggacaagttttaaagcagctttactttctggtccacctggagttggtaaaactactaca
gctgctttggtttgtaaggaactggggtatagctacgtggagctgaatgccagtgacact
cgcagcaagaacagtctaaaggaagtagttgctgaatcacttaacaacaccagcatcaaa
gacttctattctggtgcatcctcatcagttagcgggaaacatgtattgatcatggatgaa
gtggatggtatggcaggcaatgaagacagaggagggattcaggagctgatcgctttgatc
cgacacacgaagatacccatcatttgtatgtgcaacgaccgcaaccatcctaaaatccgc
tccttggtccactactgcttggatcttcgttttcagagacctcgtctagaacagatcaag
ggtgccatgatgtctattgcatttaaagaaggtttaaaaattcccccacctgctatgcaa
gagataatcctggcagcaaaccacgacatcagacaggttttacataatcttaatatgtgg
tgtgcaagagataaatcattgacttatgatgaggctaaaacagatgccagcagagccaaa
aaggacatcaaattgggccctttcgatgttgtccggaaggttttcactactggagaggag
gctgctcgtatgtctcttatagacaaatcagatcttttcttccatgattattcgctagct
cctctctttgtacaagagaactacgtgcatgtgaaaccggctgctgctggaggtaactta
aaaaagcacttggtgctcttgagtagagcagctgatagtatatgtgatggtgatatagtg
gacaagcagattcgtagcaagcagaactggaatcttcttccaacacaggctatttatgcc
agcgttctccctggggagctgatgagaggttacatgtcccagtttcctgtctttcccagc
tggctggggaaattttcatccacaggcaaacatgatcgtatcattcaagaactggcaatg
cacatgagtctcagaactcagacatgcaagaggacagtaaatatggaatatttgtcatat
ttgcgggatgcacttgtccagcccttgaaagactttggagcagatggtgtacaacaagct
ataacatttatggactcctactgcttgatgaaagaagatgttgaaaatataatggaaata
agcacatggggaggcaaacccagtcctttttcaaagctggatcccaaggtcaaaggagct
ttgacacgtgcctacaacaaagaggcacatctgactccatattcacttagttctgtcaag
gcatctaaaaggcagtcgggatctgcagtgactttagatctgagtgaagacttgaatgtg
gaagaggtgcagtctgatgaggatgagcaagatactgttgacagtgatgcaatgattaag
caaaaaaaggtgaagtcttccaagctgacaaaaagagagaaaaatgaagaaacaacaaaa
aaagaagggaaaagaaaagagaaaacaagacatttagagtaa

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