Aphelocoma coerulescens (scrub jay): 138109946
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Entry
138109946 CDS
T10543
Symbol
PROM1
Name
(RefSeq) prominin-1 isoform X1
KO
K06532
prominin 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acoe04147
]
138109946 (PROM1)
04090 CD molecules [BR:
acoe04090
]
138109946 (PROM1)
Exosome [BR:
acoe04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
138109946 (PROM1)
CD molecules [BR:
acoe04090
]
Proteins
138109946 (PROM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
DUF1218
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
138109946
NCBI-ProteinID:
XP_068870486
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Position
4:64052462..64117071
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AA seq
870 aa
AA seq
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MAVELCLLLLLLFCGSTISEVQPIYKPPPGTLDFGFVPSKTYDTGAYHEPGAIGILFKIV
HAFLYLVQPNSFPQDLIRKLAQQQFGNSQGDYQKPENVVLTLQAIYYEIGFIVSAALGLL
FILLLPLVGLCFCMCRCCDNCGGEMHQRQKKNADCQRSCFATFLFVASLIISVGVLCAYA
ANQHLTNQVRGAKKLVNSNFKDLKIFLNDTPAQIDYLVSQYNTTKDKALSDLNNVGPVLG
TRVQEQLGKEVRPALDAALTMAGAIRETKEALENVSVSVEVLQEGTERLHANLTDVKMHL
SNTLSDSACNAAQAASTCNIIRNSLSQLNINANFTGLPGVNSQLAKVNDVLKIDLSSLVQ
KGYAAFNDTPDLVVNQTRNILSDIKSVLESIGSNITTFTKMLPVQKIVADLMVYLTQSEA
YVQDYFPVMEQYDFYRWLGCLILCCMVVLILVFYYLGLLCGTCGYDKHASPTTRGCISNT
GGNFLMAGVGFSFLFSWVLMVVVVLTFVTGGNVEKLVCEPFEDKNLFKVLDTPYLLNQHW
KNYLAGIIFKNPNVNLTFEKVYSDCKENKGIYTSLHLEHLFNINELLNISMYTEDVALRI
EHIQINLSKIILLDEIGKENLLNFSSSGIDGIDFSAYLTEINKSVTKVDLLSFANDLEAR
ADQLPKGALENALKGHANNIRMIHNQQVVPLEQAMTVKKYVKARSTLNQSIRLLKRTSSE
LMVKVKNVISAVNAAQNLINNNASQVIVQETKEYMDTIIGYFEQYIEWVKESIAMEVAAC
KPIANVIDTAVDIFLCSYIADSVNTFWFGLGGSSMFLIPAIIFAVKLSKYYRRMDTEDVY
DDTENGNNGYHKEHLYGIHNPVFTSSVEQW
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggaactctgtttgctgctgctgctgctgttttgtggaagtactatttcagag
gtacagcctatatacaaaccacctcctggaactttggattttggatttgtaccatccaag
acgtatgatacaggtgcataccatgaacctggggcaataggaattttgtttaaaatagta
catgcattcctgtacttagtgcagccaaattcttttcctcaagatctcatcagaaaacta
gcacagcagcagtttggaaattcacagggcgattatcaaaagccagaaaatgttgtcctg
actcttcaggccatctactatgaaatcggttttatagtctccgcagccttgggattgcta
tttattttgttactgcctcttgtgggactttgcttctgtatgtgtcgttgctgtgacaac
tgtggtggggaaatgcatcaaagacagaagaaaaatgctgactgtcagaggagctgtttt
gcaacatttctttttgttgcttctttaataataagtgttggagtgctctgtgcatatgct
gccaaccagcatttaactaaccaagtccgaggagcaaagaaactggttaacagtaatttt
aaagatctgaaaattttccttaacgacactccagcgcaaattgactacttggtgagccag
tacaacactactaaggataaagcactctccgacctaaataatgttggacctgtgcttgga
accagagttcaagaacagctgggaaaagaagtacgtcctgcactcgatgcagctctgaca
atggcaggagccatcagagaaacgaaggaagctctggaaaatgtgagtgtctctgtagag
gttttgcaggagggaacagagagacttcatgccaacttgacagatgttaaaatgcaccta
agcaacaccctcagtgactccgcgtgcaatgcagctcaggctgcttcaacttgcaatatc
atcaggaattcattgagtcaactgaacatcaacgccaattttactgggttgccgggcgtg
aactcacaacttgcaaaggtcaatgatgtccttaaaatagacctttctagtctagttcaa
aagggttatgcagcatttaatgatactccagacttggtggtgaatcaaaccaggaacatt
ttatcggatatcaaaagtgtgctggaatccattggttcaaatattactaccttcacaaaa
atgctccctgttcagaagattgtagcagatttgatggtgtatcttacacagagtgaggca
tatgttcaagattattttccagtcatggagcagtacgatttctacaggtggctgggttgt
ctcattctgtgctgcatggtggtcctgattctggtcttttactatcttggattgctatgt
ggcacctgtggttatgataaacatgcttctccaacaaccagaggctgtatctccaacact
ggaggaaactttcttatggctggtgttggattcagttttcttttctcctgggtgctgatg
gttgtagtggtgctcacttttgtcacaggtggaaatgtagaaaaattggtctgtgagccc
tttgaagataaaaatttattcaaggttttggatacaccttacttactaaatcagcactgg
aaaaactatcttgctggcatcatctttaaaaatccgaatgttaacttgacttttgaaaaa
gtgtacagtgattgcaaggaaaacaaaggaatttatacttcccttcacctagagcatctg
tttaatatcaatgagcttttaaatattagtatgtatacagaagatgtagcgcttagaatt
gaacacattcagataaacctcagcaaaatcattctgctggatgaaattgggaaggagaat
cttctgaatttcagctcttcaggaatagatgggatagacttctcagcatatttgacagag
atcaataaaagtgttaccaaggttgatcttctctcatttgctaatgatttagaagcaaga
gcagaccagctgccaaaaggagcactggaaaatgccttaaaaggacacgcaaacaacatt
cgaatgattcataaccagcaagttgttccactggagcaagctatgactgtcaagaaatat
gttaaagctaggagcactttaaatcagagcattaggttactgaagaggacatcatctgaa
cttatggttaaggtgaaaaatgtcattagtgctgttaatgctgcccagaatctcataaat
aacaacgcttctcaagttattgtccaggagacaaaagagtacatggataccataattggc
tactttgagcaatacattgagtgggtcaaggagtcgattgccatggaagtagcagcatgc
aagcctattgccaatgtgatagatacggcagtagatatttttttatgcagctatatagct
gattctgtgaataccttctggtttggtttgggaggctcttcaatgtttctaattcctgcc
ataatttttgctgtaaaactctctaaatactatcgcagaatggatacagaggatgtatat
gatgatacggaaaatggtaataatggttatcataaagagcatttatatggtatacacaat
cctgtttttacaagctctgtggaacagtggtaa
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