Aphelocoma coerulescens (scrub jay): 138109958
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Entry
138109958 CDS
T10543
Symbol
BOD1L1
Name
(RefSeq) biorientation of chromosomes in cell division protein 1-like 1 isoform X1
KO
K27262
biorientation of chromosomes in cell division protein 1-like 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
DNA repair and recombination proteins [BR:
acoe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
138109958 (BOD1L1)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138109958
NCBI-ProteinID:
XP_068870524
LinkDB
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Position
4:64997790..65033753
Genome browser
AA seq
3029 aa
AA seq
DB search
MATNPQPPPPPPPPPQQPPPLPGAGAGAGGGAAEPELVSMIVNHLKSQGLFDQFRRDCLA
DVDTKPAYQNLRQRVDNFVSNHLATHTWSPHLNKNQLRNNIRQQVLKSGMLESGIDRIIS
QVVDPKINHTFRPQVEKAVHEFLATLNHKEESGPSTSPSEEKADASVAVQGVSATAPSAN
VASDAMSILETITSLNQEASAARASTETSNPKNNDKFAKKLSSQQSVDGSTDKERNTEDL
PDREKAICDLSGEGAETLAKCEDLNELPCQSEEIKISAKDTNILTFTSKDIQQESEEVKS
KLLDKSDKKPDSSEKSERRKEKKEKLDKKSDHSKKSDDTTKSKEEKQAKESEPVKQLVPE
KNSNKHKTSESTKEENMLIDSDTDVLSDITVSSVHTSDLSSFEEESEEEPVISDSTEEGE
ITSGDEEEINSQSKTKPHANELSDGKAKPVRHAYVRKPFLYSKYFSDSDDERTVEQRRQS
IAKEKEERLLRRRINRERLEEKRKQKAAEKTKSLKTGNQNAKGKSGLHLEEPSSKSVESK
TTGTSIKDVLKEQKFLEKKVALSRKRKRDSRHAEDSCRKKNEPSEEDSKEMQKTNETCEK
NSSKELKHNHGKNEFSKQLRRLSEWGHSTEEGKSDSKTEKEHKRRTSTSLQAEGTQQDNE
TRDPKKQLDKAEVNSEEPQKQKSIFKNEKHPKKDTDTEIQHMRNSAKKEAKSYRDKTEKE
RTSLEDKLSLKHKYKGDGIHKSGEDAELHSSERSLKGEDGGQKHNQQIKVSSDDKCERKS
KHRSERKVSVTGKDGKNPSESTLKAEELLRKENKKDRHLSRAECKTKRSLSDSKPQKDSL
SASKQPASASHRRSESYSEDKHEIESTNSDSNVKHEDGVHKDRRRSKSLAEDKILLKSKS
KSHNKQFKASETELQELTKHDTGQKLDKDKSLEDNDSDKQHKSRNEDKGLEDSGAEFELG
SGPQSTQGSQKDFSHRVKLHSGEKGSLKEKYRGDKDLSNSKLERRFSAEGHKSRNLKHSN
KEAKKKEESIKLEDKDTKEMDSGHERLSNVTVAVDKKQSKKVSCENRKGSLSNQDLLKEE
KQSASTTESSQAPAPQKAAMNNDGLHSGHAEELMELDLKKTKAQEASNIEGKNIQNSLQA
RDAKCAVKQKVSRSVSNKELKHSLADPEACESQFLPAAEKTVEQEDTSNKQVGALDTLSK
KASMAQGPSKQGASKMSIVDETSGRTLKNVASKDQASKDSRRPKNLKTVINSNSDDVPLA
INSSREDAADAKSMDMDISDFTDSLGSMSKECHNSDGTSLLEDAFLLKKDTAQVVYMEQD
SAGPSSIMKDDGDTTIMANSIEKDNEVSRSGEQATEDGTAGLCSQDYSGAAKSESSQDRE
LKRKEENLLSDITEDRGDVTTKELTLRIKEGECLNTDPSTKGERSTMDSVEKNKVHDTDY
MIQSSSVLVPEGVPEETFKGSVIASGQEGTNVVGMEDKNESNAVGTSAGSNKPSSLYSSL
QKTPATVIGTSTEKITESTAMATSTGGGRAEGTPHSEKDSDATTTCSEQESEVTVICTSI
EADEGFTTGVWVKSSEGCSFITGADIGDCTVAAAEEGGGSVVTEGLAESESFLTSTEGEE
NGDCTMVDAEEGGKDSVNPSRVEIEDSVNSAGTEEKDDAVTSAGSEEKRNTSTCVDTGKF
ESSVSCLGEMESDGAVTSAGTETGEGSTSGDNSGEFRGSVIAGQVKEHEGTVTCTGAEER
GHNFIICSVTGTDTQGESTITGECIAVVTNNSATAGTSGDKSEDTVNGESTVTSTGITPE
DDAEISAVCTGLEDSNEGFVVCLEAEKCESLMDSTRAKEEASITTVSVGLCDDEGFVTST
GSKEEDEEGEDIVTSTGRGNEENEHASTCTGMESENALICIGAEEGESSIICIVAEQMEA
ESGVAGTDINKLTVDSMTSVEKEANCGTDCKNYKGIVESSVTSASAADEGALPAQKGKHE
GTLLPSDAEECEGPMTSAMAVQDKTQFGAEDKHENAMTSFHSRELDASISSAVPKEDETS
RTPSDREVKVKGDVISTSTVEDAPLHSAMDAEEGPLAIARVNESGESSMILIDTEDTMPM
PSTATEFKECVNTSTSKQEKDECTMISTSIVEEFEAPMSSAAIEYDGQLPSVKTEEINEN
AMVSIDMEVYEVPMPSESSTGGDDNSDDGSHPTASGKEEKDECAMISTSVVEEQVILMSG
EVTEEAIQHTSDTESKNETLMISTSTAECFEAPMSSVAMQDENKLTASETEGRYEAAMIT
TSMTEECEIVLISAAPQAESQLIVAGDEDAVLSPNASEECKGVETTATVDEQFGLAAFNA
DGKSKGSVIFVGECGAPVLRVATDSEDQQTASNIGDKDEGAVITLSTMEECDSLFTFTVI
EESQLAAESTEVKDNSEEIFNTANQIECILSTTGSEKSENSLLVIGRENETRESGARTES
AASQATADSEITETGENAVNLMSVDEALCVEVSTEAAESPSPDAGEDNEQAEDVLHEDVT
SELSCTISEAVIENEAVKNVNYKLNSNVVLESDFSEIRTHLPKTQALSLVSANEVTVSTN
HGEVTIEAELGKKGDLPLLHVEEPYDSDDKTSLVKTDDTGVEVTFQKSNATFNSGNDAAL
PKLAEELESTLKTGKSQQPESARSEEGCVDLQTKELQKDMLQRNTPLERETSHVENLATQ
ITEEHRSSGIQYESSETMEKEKCNQPMAQDVLKDDEQSQCSKMKPDNIKEVISGDAAEVS
KETDVTQTPPRSTVEEKDEFKIEQEMSEKKKRSLESNENSPEENQPVVVKRKRGRPRKYP
LEAVQPGGGESKADMSTGNLQSPTFASRGKTPPTGTDISNKKETTNEDETEKAEMVVRKR
GRKPRRSLVQSEETETLEPEKKRRKLTSSEDELKEQEEGDEEDGEEDDDAHSGATTRSAT
RLEAQRKQPSKPTTRATSKGSSPSSVSPRKRQKLAAKKRSSSDTKINKSPPLTQLKVQSA
KRKREDSPTVVRRKGQQKTEETPVKKAKR
NT seq
9090 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaacccccagcccccgccgcccccgccgccgccccctcagcagccgccgccg
ctgccgggggccggggccggcgcggggggcggcgcggccgagcccgagctggtctccatg
atcgttaaccacctcaagagccaggggctcttcgaccagttccgccgcgactgcttggcc
gacgtggacaccaagcctgcctaccagaatttgagacagcgcgttgacaactttgtttcc
aatcatttggcaactcatacctggagtcctcatctcaacaaaaaccagctgagaaataac
attagacagcaggttctcaagtctggaatgttggaatcgggaattgacagaattatttct
caggttgtggacccaaagatcaaccacacattcagacctcaggtggaaaaagctgtccat
gaatttttagccacattgaatcacaaagaggagtcaggccccagtacatctccgagtgag
gagaaagcagatgcttctgttgcagtacaaggtgtctctgctacagctccaagtgctaat
gtagctagtgatgcaatgtccattttggaaacaataacttctcttaaccaagaagcaagt
gctgccagggcttcaacagagacctcaaatcccaagaacaatgacaaatttgcaaaaaaa
ctctcatctcagcagagtgtggatggtagcactgataaagagagaaatacggaggacttg
ccagacagagagaaagcaatttgtgacctttctggagaaggggctgaaacacttgcaaag
tgtgaagatttaaatgagcttccctgccaaagtgaagaaataaaaatttcagcaaaggat
actaatattttgacttttacaagtaaggatattcaacaggaaagtgaagaggtaaagagt
aaattattggataaatctgacaagaaaccagacagcagtgaaaaaagtgaaagaagaaaa
gaaaagaaggaaaagcttgacaagaagtctgatcattcaaagaaaagtgatgatactaca
aagtcaaaagaagaaaagcaagcaaaagagtcggaaccagtgaaacagttagttccagaa
aaaaacagcaataaacataaaacatctgaaagcactaaagaagaaaatatgttaatagat
tcagatacggatgtactcagtgacatcacggtcagctctgtccataccagtgacctttct
tcctttgaagaggagagcgaagaggagcctgtaatttctgacagtactgaagagggggag
atcacatcaggtgatgaagaggagataaacagtcaaagcaagacaaagccccatgctaac
gagctgagtgatgggaaagccaagcctgttcgccatgcttatgttcgcaagcctttcctg
tactccaaatacttcagtgattctgatgatgaacgaactgtagaacagcgccgtcagtcc
attgccaaagaaaaagaagaaagactccttagaagacgaattaacagagagagactcgaa
gaaaaacgtaaacagaaggctgcagaaaagacaaaatccctaaaaactggaaatcagaat
gctaaaggaaaaagtggcttgcacttagaagaaccttcatcaaaaagtgtagagtcaaaa
actactggtaccagcattaaggatgtgcttaaagaacagaaatttttggaaaaaaaagtg
gccctgagcagaaaaagaaaaagggattcaaggcatgctgaagatagctgcagaaagaaa
aatgagccatctgaagaagattctaaagaaatgcaaaagacaaatgagacttgtgaaaaa
aattcttccaaagaattgaagcacaatcatgggaaaaacgaattctctaaacagcttaga
agactttcagaatgggggcattcaactgaggaaggcaaaagtgattctaagacagaaaaa
gaacataaaagaagaacctccacttctcttcaggctgaaggaactcagcaggacaatgaa
acaagggatccaaaaaaacaactggataaagcagaagtcaatagtgaagaaccacagaag
cagaaatccatatttaagaatgaaaaacaccccaaaaaagatactgacacagaaattcaa
catatgagaaattctgccaaaaaagaagccaagtcttacagagataaaactgagaaggaa
agaacttctttagaagataaactttctttaaagcacaaatataaaggagatggtattcac
aagtcaggtgaagatgctgaacttcattcatctgagagaagtttgaaaggagaggatggt
ggccagaaacataatcaacaaataaaggtttcctcagatgacaaatgtgaaagaaaaagt
aaacaccgaagtgagcggaaagtatcagtaacaggaaaggatggaaaaaacccttctgaa
tcaaccttaaaagctgaagaattactgaggaaggaaaacaaaaaagacagacatctctca
agggcagaatgcaagaccaaaaggtccttgagtgattctaagccacagaaggattcccta
agtgcctcaaagcaacctgcttcagcatcgcatagaagaagcgaaagctactcagaagat
aaacatgaaatagaatcaactaactctgatagtaatgtaaaacatgaagatggtgttcat
aaagatagacgaagatctaagagccttgcagaagacaagattttgttaaagtccaagtca
aagagtcataataaacagttcaaagcatctgaaacagaattacaggaattaacaaaacat
gacactggacagaaactggacaaagataagagcctggaagacaatgattcagataaacaa
cacaaatccagaaatgaagataaaggtttggaggatagtggtgctgagtttgagcttgga
agtggcccacagtcaactcagggatcacaaaaagactttagtcacagagttaagttacat
tctggagaaaaagggtctctaaaagagaagtacagaggtgataaagatttaagtaattct
aaactagaaagaaggttctctgctgaaggtcataaaagcagaaacttaaagcacagcaac
aaggaagcaaagaagaaggaagagagcatcaaattggaagataaagatactaaagaaatg
gatagtgggcatgaaagattgtcaaatgtcacagtggcagtggataagaaacaaagcaag
aaagtatcctgtgaaaacagaaaaggcagtttatcaaaccaagatttacttaaggaggaa
aagcaatcagccagcacaactgaaagcagccaggctccagcccctcaaaaggcagctatg
aataatgatggcttgcattctggtcatgcggaagagctgatggaacttgatttgaaaaaa
acaaaagcacaggaagcatctaacattgaaggaaaaaacattcaaaactctttgcaagcc
agagatgccaagtgtgcagtaaaacaaaaagtatctcgttctgtttcaaataaggagtta
aaacatagcttggcagatcctgaagcctgtgaatcacagtttctgcctgcagctgaaaaa
actgttgaacaagaagatacttctaataaacaagttggtgccttagacactttgtccaaa
aaagcttctatggctcaaggacccagtaaacaaggggcttctaaaatgagcattgtggat
gaaacaagtggtagaaccttaaagaatgtggccagtaaagatcaggcttcaaaagatagc
agaagaccaaagaatttaaaaactgtgataaattctaattcagatgatgttcctttagca
attaattcttcaagggaagatgctgctgatgcaaagtccatggatatggatatctcagat
tttacagattctttaggtagtatgtctaaagaatgccataattcagatgggacttcctta
ttggaagatgctttccttttgaagaaagatacagcacaggttgtatacatggaacaagat
agtgcagggccaagttctatcatgaaagatgatggtgacaccaccatcatggcaaacagt
atagaaaaagataatgaggtgtcccggtctggtgaacaggcaacggaagacggtacagct
gggttatgtagtcaagattacagtggagcagcaaagtcggaaagctctcaagatagggag
ttaaaaagaaaagaggaaaacttgttgtctgacataactgaagatcgtggagatgtaaca
acaaaagaacttaccctaagaataaaagaaggagagtgcttgaatacagatccctccaca
aagggagaaagaagcacaatggatagtgtggaaaaaaacaaggtgcatgacactgattat
atgatccagtcttcctctgttttagtgcctgaaggagttcctgaggaaactttcaaaggc
tctgttattgccagtgggcaggaagggaccaatgtggttggcatggaagacaaaaatgaa
agtaatgctgtaggtaccagtgcaggaagtaataaacctagttcattgtacagcagccta
caaaaaactccagccactgtgataggaactagcacagaaaagatcactgagagcactgca
atggcaactagtacaggaggaggaagagctgagggtacaccacattctgaaaaggacagt
gatgctacaaccacttgctcagaacaagaaagtgaggtgacagtaatctgcacaagcata
gaagctgatgaaggtttcacaacaggtgtatgggtaaaaagtagtgagggttgcagtttc
atcacaggagcagatattggtgactgtactgttgcagcagctgaagaaggtggtggcagt
gttgtcactgaaggattagcagaaagtgaaagtttcctaacaagtacagaaggagaagaa
aatggtgactgtaccatggttgatgcagaagagggtggtaaggactcagtgaacccaagc
agagtagaaattgaagacagtgtgaatagtgctgggacagaagaaaaagatgatgctgtg
actagtgcaggctctgaagaaaagcgaaatacctcaacttgtgtagatacaggcaaattt
gaaagttctgtgtcgtgcttaggtgaaatggagagcgatggagctgtaactagtgcaggg
acagaaacaggtgaagggtccaccagtggtgataattcaggtgaatttaggggcagtgtg
atagctggccaagtaaaagaacatgaaggtactgtgacttgcacaggtgcagaagaaaga
ggtcataacttcatcatctgctctgtgactggtacagatacccaaggagaaagcaccata
actggtgaatgtattgcagtggtcacaaacaacagtgctacagctggaactagtggtgac
aaatctgaagatactgtaaatggtgaaagcacagtgaccagcacaggcataaccccagaa
gatgatgctgaaatttcagcagtctgcacagggctagaagacagcaatgagggatttgta
gtttgtttagaagctgaaaaatgtgaaagtctaatggacagtacaagggcaaaggaagaa
gccagtatcactacagtcagtgttggtctgtgtgatgatgaaggttttgtgactagtaca
ggctcaaaagaagaggatgaagaaggtgaggacattgtaaccagtacaggaagaggaaat
gaagaaaatgagcatgcttctacttgtactggaatggaaagtgaaaatgcactaatttgt
ataggtgcagaagaaggtgaaagttccattatctgcatagttgctgaacaaatggaagct
gagtcaggagtggctggcacagatataaataagcttactgtcgacagcatgacaagtgta
gagaaagaagctaattgtggcacagactgcaaaaattataaaggcattgttgaaagcagc
gtaaccagtgcaagtgctgcagatgagggtgccttacctgcacagaaaggaaagcatgaa
ggtaccttgcttccctcagatgctgaggagtgtgagggtcccatgactagtgctatggca
gtgcaagataagactcagtttggtgctgaggacaaacatgagaatgccatgacttccttt
cacagcagagaacttgatgcctctataagtagtgcagttccaaaggaagatgaaacttct
cgtactccttctgacagagaagtgaaagtgaaaggtgatgtcatctctaccagcacagtg
gaagatgctcccttacattcagccatggatgcagaagaaggtccacttgctattgcaagg
gtaaatgaaagtggggaaagctctatgatcttaatagacactgaagacacaatgcctatg
cccagcacagctacagagtttaaagagtgtgtgaatacttctaccagtaagcaggagaaa
gatgagtgcactatgatttccaccagtattgtggaggaatttgaggctcctatgtcaagt
gcagctattgaatatgatggtcagctcccctctgtgaaaacagaagaaataaatgagaat
gctatggtttccatagatatggaagtatatgaggttcccatgcctagtgaatccagtaca
ggaggagatgataacagtgatgatgggagtcacccaactgctagtggtaaggaagaaaag
gatgagtgtgctatgatttccacaagtgttgtggaagaacaagtaatcctaatgtcaggt
gaagtcacagaagaggcgattcaacatacctcagacacggagtcaaaaaatgaaacatta
atgatctctacaagtacagcagaatgttttgaagctcctatgtctagtgtagctatgcaa
gatgaaaacaaactcactgcttctgaaacagaaggaagatacgaggctgctatgatcact
acaagcatgacagaagaatgtgaaatagtcctgatcagtgcagcaccacaagctgaaagt
cagctcattgtagcaggagatgaagatgctgttctctctccaaatgcatcagaggaatgt
aaaggtgtggagaccactgcaactgtagatgagcaatttggactagctgcttttaatgca
gatgggaaaagcaaaggttctgtgatttttgtgggagaatgtggagctcctgtgctaagg
gttgcaactgacagtgaagatcaacaaactgcttcaaatataggagataaggatgagggg
gcagtgatcactctgagcacaatggaagaatgtgatagtctctttacctttacagtcata
gaagaaagtcaacttgctgctgagagtacagaagtaaaagacaacagtgaagaaattttt
aatactgctaaccagattgaatgcatcctatcaactacaggctccgaaaaaagtgagaat
tctttgcttgttattgggagagagaatgagacacgtgagagtggggcgaggacagaatcg
gcagcatctcaggccacagcagacagtgaaatcacagaaacgggtgaaaatgcagtgaac
ctcatgagtgtagatgaggccctctgcgtggaggttagtacagaggctgctgagagtcct
tccccagacgcaggtgaggacaatgagcaagctgaagatgttttgcatgaagatgttaca
tcggaactctcttgtacgatttcagaagcagtgatagagaatgaagctgttaagaatgta
aactataaattaaactcaaacgtggttttagaaagtgacttttctgaaataaggactcac
ctgcctaagacacaggctctttccttagtttctgcaaatgaagtgactgtaagcaccaac
catggtgaagtaacaatagaagcagaattagggaaaaaaggggacctccctttgttgcat
gtagaagagccatatgacagtgatgacaaaaccagcttggtcaaaacagatgatactggc
gttgaagttacttttcagaaaagtaatgcaacctttaattcaggcaatgatgcagcctta
ccaaagttggcagaagaactagaaagtaccttgaaaactggcaagtcacaacagcctgaa
agtgcaagaagtgaagagggatgtgtggatcttcaaactaaagaattgcaaaaagatatg
ctgcagagaaatactcctttagaaagagaaacttctcatgtggaaaacttggctacccag
ataactgaagaacatagatctagcggaatacaatatgaatcttcagaaacaatggagaaa
gaaaaatgcaaccagccgatggctcaggatgtgctaaaagatgatgaacaaagtcagtgt
tccaaaatgaaacctgataacatcaaggaagttatttcaggtgatgcagcagaagtgtcc
aaagaaactgatgtaacacaaacacctcctaggagtactgtggaagaaaaagatgaattt
aagattgaacaggaaatgtctgaaaagaaaaagcgcagtctagaatcaaatgaaaattct
ccagaggaaaatcagcctgtagtagtgaaacgcaaaaggggacggcctcgtaaataccct
cttgaagcagtacaacctggtggtggggagtcaaaagctgatatgagcactgggaatctg
cagtctcctacctttgcaagcagagggaaaacacctccaacaggtacagacatatctaat
aagaaagaaacaacaaacgaagatgaaactgagaaagcagaaatggttgtgcgtaaaagg
ggaagaaagcccaggcgttctctggttcaatcagaggaaactgaaacactggagccggag
aagaaacgtcggaaattaacatcttctgaagatgaactaaaagagcaagaggaaggtgat
gaagaggatggtgaggaagatgatgatgcacattctggggccacaactagatcagccaca
agattagaggctcagagaaaacagcccagcaagccaaccacacgtgcaacttctaaaggc
agcagtccaagttcagtttctcctagaaaacgacagaaactagcagctaaaaaaagatct
tcaagcgatacaaaaattaataaatctcctccattgacacagttaaaggtgcagtctgcc
aagcgtaaaagggaggacagcccaacagtggtacggagaaaaggccagcagaaaacagag
gagacgccagtaaagaaagcaaaacgataa
DBGET
integrated database retrieval system
