Aphelocoma coerulescens (scrub jay): 138110013
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Entry
138110013 CDS
T10543
Symbol
RNF4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoe04121
]
138110013 (RNF4)
Enzymes [BR:
acoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138110013 (RNF4)
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138110013 (RNF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_4
Prok-RING_4
zf-rbx1
zf_RING_Vps8
zf-UDP
zf-C3HC4_4
Rtf2
zf-RING_16
zf-RING_10
zf-RING_6
Sina_RING
zf-RING_11
zf-RING_Vps41
TRAF3_RING
zf-P11
DZR
Motif
Other DBs
NCBI-GeneID:
138110013
NCBI-ProteinID:
XP_068870699
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All DBs
Position
4:complement(70571229..70586167)
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AA seq
360 aa
AA seq
DB search
MRPFLPVRGAGPAPPPLRPEDGARPPFPGAALSEGVPRSPRREPHGGSALPGPAGCSGAG
SAAARLAGRPRRFCPALPGGRPQRQGTDSSQAVWLPAVGIWRWIAEESCSSGVLGLEEHR
PLTFRNLEFLSVSYLKESKEIIAVASLPLLFWCLYLFFSGFRSRNTMSTTQRKRRGGAVN
SRQAQKRNRLVASTAEMASEAEPIELEESAGEEVVDLTCESSDPVVVDLTHNDSVVIVEE
NQRQRRNLRLRSQRQSDSCVLSSDDEDETRDNDVYVTDKASRELGPLEEETASSKPSGTV
SCPICMDVYSEIVQSGRLIVSTKCGHVFCSQCLRDSLRNANSCPTCRKKLTHRQYHPIYI
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgttcctgccagtgcgcggggctgggccggcgccgcccccgctccggcctgag
gacggtgcccgaccccctttcccgggtgccgccctgtctgagggggtcccccgcagcccc
cgccgagagccgcatggcgggtccgccctccccggcccggccgggtgctccggggccggc
tccgccgccgcccggctcgcggggcggccccgccgcttctgccctgccctgcccggcggg
cggccgcagcgccagggtacagattcctctcaagctgtttggctcccagctgttggaatc
tggagatggattgcagaagagagctgttcatctggagttttaggcttggaagaacaccgt
cctctgaccttcagaaacctggagtttttgtcagtgagctacctgaaggaatctaaggaa
attatagctgtagcttcattgccattacttttttggtgtttgtacctctttttcagtggt
tttagatcaagaaacactatgagcacaactcaacggaagcgccgcggaggagcagttaat
tctaggcaagctcaaaaaagaaacaggctcgtggcttctactgctgaaatggcttcagaa
gcagagccaatagaacttgaagaaagtgctggtgaagaagtagtagatctcacatgtgaa
tcttctgatcctgtagtcgttgatctaactcacaatgattccgttgtgattgttgaagag
aaccaacgacaaaggagaaatctgagactaagaagccagcgacagtcagacagctgtgta
ctgagtagtgatgatgaggatgaaacaagagataacgatgtgtatgtgactgataaagcg
tctcgagaactgggaccactggaggaggaaactgcaagttcaaagccgtctggcactgtt
agctgtcctatttgcatggatgtctactcagagattgtgcaaagtggacgactgattgtg
tcaacaaaatgtggccatgtcttctgcagtcagtgcctccgtgattcccttaggaatgcc
aactcttgcccaacctgcaggaagaaactcactcacagacaatatcatcccatttatata
tga
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