Aphelocoma coerulescens (scrub jay): 138110109
Help
Entry
138110109 CDS
T10543
Symbol
DCTN1
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04814
Motor proteins
acoe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
138110109 (DCTN1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
138110109 (DCTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138110109 (DCTN1)
03036 Chromosome and associated proteins [BR:
acoe03036
]
138110109 (DCTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
acoe04812
]
138110109 (DCTN1)
Membrane trafficking [BR:
acoe04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
138110109 (DCTN1)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
138110109 (DCTN1)
Cytoskeleton proteins [BR:
acoe04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
138110109 (DCTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
138110109
NCBI-ProteinID:
XP_068870915
LinkDB
All DBs
Position
4:77539999..77595885
Genome browser
AA seq
1347 aa
AA seq
DB search
MDPAERWLEWFVGGIHVLGSGVGGTGNPWKWDGWHQESLELCDAWCFLPGERGSLHPWPG
VTLTCGGCSGLLHPSVHPSVHPGVHPSTRLHRLAEWEWEHKAAPLASSTPRMSADGGSKP
LKVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCEENHG
IFVRQSQIQVFEDGADTTSPETPESAAMKVPKRDSLDAAKASKLPTRTPTSSASGGTAGP
SGSASASGGEMSSSEPGTPAQTPLVAPVIPTPSLGSPGAPPAPSPTKEEENLRAQVRDLE
EKLETLKIKRNEDKAKLKELEKYKIQLEQVQEWKSKMQEQQAELQKRLKEAKKEAKDALE
AKERYMEEMADTADAIEMATLDKEMAEERAESLQQEVDSLKEKVEYLTMDLEILKHEIEE
KGSDGAASSYQVKQLEEQNARLKEALVRMRDLSASEKQEHVKLQKQMEKKNTELESLRQQ
REKLQEEVKQAEKTVDELKEQVDAALGAEEMVETLTERNLDLEEKVRELRETVGDLEAMN
EMNDELQENARETELELREQLDMATARVREAEKRVEAAQETVADYQQTIKKYRELTAHLQ
DVNRELMSQQEASAEKQQQPPPEMFDFKIKFAETKAHAKAIEMELRQMEVQQANRHVSLL
TSFMPDSFLRHGGDHDCVLVLLLIPRLICKAELISKQAQERFELSESCAERAGLRGAPGE
QLSFAAGLVYSLSLLQATLHKYEQALNRCSVEVYKKVGTLYPEMSVHERSLDFLIELLHK
DQLDETVNVEPLTKAIKYYQHLYSIHLADQAEDCTLQLADHIKFTQSALDCMGVEVCRLR
AFLQAGQEAADLAILLKDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALGFGAQVSDTLL
ECRKHLTWVVAVLQEVAAAGAQLIAPLAENEGLPAPRLEELAFKVSEQIYGSQGINPYEC
LRQSCSILMATMNKMATAMQEGEYDADRPQNKPTPPAELRAAALRAEITDAEGLGLKLED
RETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSASKDADDRVEKIQTKLDETQTLLKK
KEKEFEETMDALQADIDQLESEKVELKQRLNNQSKRTIEGLRGAPASGVASIVSGIAGGV
GAGQVPGGGSGPVQVKDSPLLLQQIDALQLSLKHLKNENNLLKGAQMKMELASLAPLQVP
RVAVPRDRPGEALPTQTLYRKTTQLLETLYQLSANAKVVDMRQSKSTRSSSARLLEQTAR
LCALKNSIDTLKDDTLREMVQQQPGAGISTTFGTFPSSSFLKAKQEQAQGPALCGRVTIP
CAPGHGQAHRVLLTPDLLQHLRQHFVA
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgcagagcgatggctggagtggtttgtgggggggatccatgtcctgggaagt
ggagtgggtggtactgggaatccctggaagtgggatgggtggcaccaggaatccctggag
ctctgtgacgcctggtgcttcctcccaggagagcgaggatcgctccacccctggcccggt
gtgaccctgacatgtggaggatgctctgggctgctccatcccagtgtccatcccagtgtc
catcccggtgtccatcccagtacacggctccacagactcgctgagtgggagtgggagcac
aaggcagcgcctctggcctccagcacgcccaggatgagcgcggacggcggcagcaagccc
ctgaaggtgggctcccgcgtggaggtcatcggcaagggccaccgcggcaccgtggcctac
gtgggggccacgctgttcgccaccggcaaatgggtcggggtcatcctggacgaggccaag
ggcaagaacgacggcacggtgcagggcaggaaatatttcacctgcgaggagaaccacggc
atcttcgtgcggcagtcgcagatccaggtatttgaggatggagcggacacaacgtcccca
gaaaccccagaatctgctgccatgaaggtccccaagagagattccctggatgctgccaag
gccagcaaactgcccacccggacccccacatcatcggcgtccggcggcacggccgggccc
tcgggatcggcctcggcgtccggcggggagatgagcagcagcgagcccggcacgcccgcc
cagaccccgctggtggcccccgtcatccccacgccctccctgggctccccgggggcaccc
ccggccccctcgcccaccaaggaggaggagaatctccgtgctcaggtccgggaccttgag
gagaagctggagacgctgaaaatcaagcggaatgaggacaaggccaagctcaaggagctg
gagaagtacaagatccagctggagcaggtgcaggaatggaagagcaaaatgcaggagcaa
caggccgagctccagaagcgcctgaaggaggccaagaaggaagccaaggatgccctggaa
gccaaggaaaggtacatggaggagatggcggacacggccgacgccatcgagatggccacg
ctggacaaggagatggccgaggagcgggcggagtccctgcagcaggaggtggattccctc
aaggagaaggtggaatacctcaccatggacctggagatcctcaagcacgagatcgaggag
aaaggctccgacggagcagcatccagctaccaggtcaaacagctggaggagcagaacgcc
aggctcaaggaggctcttgtcaggatgcgggacttgtccgcctcagagaagcaggagcac
gtgaagctccagaagcagatggagaagaagaacacggagctggagtcgctgcggcagcag
cgggagaagctgcaggaggaggtgaagcaggcggagaagacggtggatgagctcaaggag
caggtggatgcagcgctgggtgctgaggagatggtggagactctgacagagagaaacctg
gacctggaggagaaggtccgggagctgcgcgagaccgtcggggacctggaagccatgaac
gagatgaacgacgagctgcaggagaacgcccgggagacggagctggagctgcgggagcag
ctggacatggccacggcgcgcgtgcgcgaggccgagaagcgcgtggaggcggcgcaggag
accgtggccgactaccagcagaccatcaaaaagtaccgcgagctcacggctcacctgcag
gacgtgaaccgggagctgatgagccagcaggaagcgtcggcggagaagcagcagcagccg
cccccggagatgttcgacttcaagatcaaatttgcagagacgaaagcccacgccaaggcc
atcgagatggagctgcggcagatggaagtgcagcaggccaatcgccacgtgtccctcctc
acctccttcatgcccgacagcttcctgcggcacggcggcgaccacgactgcgtcctggtg
ctcctgctcatcccacgcctcatctgcaaggccgagctgatcagcaaacaggcgcaggag
aggttcgagctgagcgagagctgcgcggagcgggcggggctgcgcggggccccgggggag
cagctcagcttcgccgccggcctcgtctattccctgagcctgctccaggccacgctgcac
aaatacgagcaggccctgaaccgctgcagtgtggaggtgtacaagaaggtggggaccctg
taccccgagatgagcgtccacgagcgctccctggacttcctgatcgagctgctccacaag
gaccagctggacgagaccgtcaacgtggagccgctcaccaaagccatcaagtactaccag
cacctgtacagcatccacctggccgaccaggctgaggactgcaccctgcagctggccgac
cacatcaagttcacccagagtgccttggactgcatgggggtggaggtgtgccggctgcgg
gccttcctccaggctgggcaggaggcagccgacctggccatcctgctcaaggacctggag
acgtcctgcagcgacatccgccagttctgcaagaagatccggcgccgcatgccgggcacg
gatgcgccgggaattcccgcggccctgggcttcggagcgcaggtgtcggacacgctgctg
gaatgccggaagcacctgacgtgggtggtggccgtgctgcaggaggtggcggcggccggg
gcgcagctgatcgcgccgctggccgagaacgaggggttgccggccccacgcctcgaggag
ctggccttcaaagtcagcgagcagatctacggctcccagggcatcaatccctacgagtgc
ctgcgccagtcctgcagcatcctcatggccaccatgaacaagatggccacggccatgcag
gagggcgagtacgacgccgaccgcccgcagaacaagcccacgccgccggcggagctccgg
gcggccgcgctgcgggcggagatcacggatgccgaggggctggggctgaagctggaggac
agggagacggtcatcaaggagctgaagaagtccctcaagatcaagggcgaggagctcagc
gaggccaacgtgcggctcagcctcctggagaagaagctggacagcgcatccaaggacgcg
gatgaccgcgtggaaaagatccagaccaagctggatgagacccagacactgctcaaaaag
aaggagaaggaatttgaggagaccatggatgctctccaggccgacatcgaccagctggag
tcggagaaggtggagctgaagcagcgcctgaacaaccagtccaagcggacgatcgagggg
ctgcggggggccccggcctcgggcgtggcctccatcgtgtccggcatcgccggaggtgtc
ggtgccgggcaggtgccgggaggcggctccggccctgtccaggtgaaggattcacccctc
ctgctccagcagatcgatgccctccagctctccctgaaacacctcaagaatgagaacaac
ctgctcaagggggcacagatgaagatggagctggccagcctggccccgctgcaagtgccg
cgggtggccgtgccccgcgaccggccgggcgaggcgctgcccacgcagactctgtaccgc
aagaccacgcagctgctggagaccctctaccagctcagtgccaacgccaaggtggtggac
atgaggcagagcaaatccacgaggagctcgtcggcgcggctgctggagcagacggcccgg
ctctgtgccctcaagaactccatcgacaccctgaaggacgacacactgagggagatggtc
cagcagcagccaggcgctggcatctccaccaccttcggcaccttcccgtcctcctccttc
ctgaaggccaagcaggagcaggcgcagggcccggcgctgtgcgggcgggtgacgatcccg
tgcgcgccgggccacggccaggcccaccgggtgctgctcacccccgacctgctccagcac
ctccgccagcacttcgtcgcctga
DBGET
integrated database retrieval system
