Aphelocoma coerulescens (scrub jay): 138110113
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Entry
138110113 CDS
T10543
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04140
Autophagy - animal
acoe04148
Efferocytosis
acoe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138110113 (VPS16)
04148 Efferocytosis
138110113 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
138110113 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138110113 (VPS16)
Membrane trafficking [BR:
acoe04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138110113 (VPS16)
Hops complex
138110113 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
138110113
NCBI-ProteinID:
XP_068870922
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All DBs
Position
4:complement(77613427..77662571)
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AA seq
837 aa
AA seq
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MDCYTANWNPLGEETFYRKLELYSMEWGLREDLRDCVVAAAPYGGPIALLRNSRREKTPS
ARPLLEIYSASGLLLASVPWKSGHLVHLGWTAGEDLLCIQEDGTVLVYNLFCEFKRHFSM
GNEVLQNHVLEAQVFHTEFGTGVAILTGALRFSLATNIDDLKLRRLPEVPGLQQPPPCWA
VLAQDRVTVVLLAVGQELFLLDSTSCSVLSPPGLSPSAGPFLHMAVSFTHRHLALFCDSG
TVWMGMASLKEKFCEFSTGIRSPPRQMVWCTRPRSRQRAVVLAWERQLMVVGNSSECIRF
VLDEDSHLVPELDGVRILSRTSHEFLHEIPEASQEIFRIASMAPGALLLEAQKEYEKESQ
KADEYLREIREQQLLPEAVGQCIEAAGYEHEPDTQKSLLRAASFGKCFLDKFPPDGFVRM
CQDLRVLNAVRDYQIGIPLTFTQYKQLTIEVLLDRLVLRRLYPLALRIGEFLRLPAAQGA
SRILAHWACCKVQQKDKSDEEVAQAISHKLGEAAGISYSDIATRAYDCGRAELAIRLLEY
EPRSGEQVPLLLKMKRSKLALGKAIESGDTDLVYTVVLHLKNELNRGTFFMTLQNQPVAL
SLYRQFCRHQERETLKDLYNQDDNHQELGNLHVLGGYREKRIEGRVAALQNALDEFYKAK
NDFAAKATEEQIKLLRLQRHLQEELDKPYLDLSLHDTVSTLILDGHHKRAEQLYRDFRIP
DKRYWWLKISALATRGDWEEMEKFSKSKKSPIGYLPFVEVAVKHHNRYEAKKYAPRVPPE
QRVKAFVLVGDLEQAADAAIERKNEAEMNLVLSRCSAGTDGAVAEKLNRARAQLLKK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggattgttacacggccaactggaacccgctgggcgaagagaccttctaccggaagctg
gagctgtactccatggaatgggggctgcgggaggacctgcgggactgcgtggtggcagcg
gccccatacgggggtcccatagctctgctgaggaattcccggcgggagaagacccccagc
gcccgcccgctcctggagatctactcggcctcggggctgctcctggccagtgtcccgtgg
aagagcggccacctggtgcacctgggctggacggcgggggaggacctgctgtgcatccag
gaggacgggaccgtgctggtctacaacctgttctgcgagttcaagcggcacttcagcatg
ggaaacgaggtgctgcagaaccacgtgctggaggcgcaggttttccacacggagttcggg
acgggcgtggccatcctgacgggagcgctgcgcttctccctggccaccaacatcgacgac
ctcaagctgcgccgcctgcccgaggttcccgggctgcagcagcccccgccgtgctgggcc
gtgctggcccaggacagggtgaccgtggtgctcctggccgtgggacaggagctcttcctg
ctggacagcacctcctgctccgtgctgagcccccccgggctgagcccctcggcggggccg
ttcctgcacatggccgtgtccttcacccaccggcacctcgccctcttctgcgactccggc
accgtctggatggggatggcctcgctcaaggaaaagttctgcgagttcagcaccggcatc
cgatccccgcccaggcagatggtttggtgcacgcggccccgcagccggcagcgagccgtg
gtgctggcctgggagcggcagctgatggtggtgggcaattcctcggagtgcatccgcttt
gtcctggatgaggattcccacctggtgcccgagctggacggggtccggatcctgtcccgc
acctcccacgagttcctgcacgagatcccagaagccagccaggagattttccggatcgcc
tccatggctccgggcgctctgctcctcgaggcgcagaaggaatacgagaaggagagccag
aaggccgacgagtacctgcgggaaatccgggagcagcagctgcttcccgaggccgtgggc
cagtgcatcgaggccgcgggctacgagcacgagcccgacacccagaaatccctgctgagg
gcagcttccttcgggaagtgcttcctggataaattccccccggacgggttcgtgcgcatg
tgccaggacctgcgggtcctcaacgccgtccgggactaccagatcgggatcccgctcacc
ttcacccaatacaagcagctcaccatcgaggtgctgctggacaggctggtgctgcgccgc
ctgtaccccctggccctccgcatcggcgagttcctgcggctgccggcggcgcagggcgcc
agccgcatcctggcacactgggcctgctgcaaggtgcagcagaaggacaagtcggacgag
gaggtggcccaggccatcagccacaagctgggcgaggcggcgggcatctcctactcggac
atcgccacgcgcgcctacgactgcggccgcgccgagctggccatcaggctgctggagtac
gagccgcgctcgggcgagcaggtgccgctgctgctgaagatgaaacggagcaaactggcc
ctgggcaaagccatcgagagcggggacaccgacctggtttacacggtggtgctgcacctc
aagaatgagctcaaccgcggcaccttcttcatgaccctacagaaccagcccgtggccctg
agcctgtaccgccagttctgccggcaccaggagcgggagacgctgaaggatctctacaac
caggacgacaaccaccaggagctgggcaacctccacgtgctcggtggctaccgagagaag
cggatcgaggggcgcgtggccgccctgcagaacgccctggatgagttctacaaggccaag
aacgacttcgctgccaaggccacggaggagcagatcaagctgctgcggctgcagcggcac
ctgcaggaggagctggacaagccctacctggacctgtccctgcacgacaccgtctccacc
ctcatcctggacgggcaccacaagcgcgcggagcagctctaccgggacttcaggatcccg
gacaagaggtactggtggctgaagatcagcgccctggccacccgcggcgactgggaggag
atggagaagttctccaagagcaagaagtcgcccatcgggtacctgcccttcgtggaggtg
gccgtgaagcaccacaaccgctacgaggccaagaagtacgcgccccgcgtgccccccgag
cagcgcgtcaaggccttcgtcctcgtgggggatctggagcaggcggccgacgcagccatc
gagcgcaagaacgaggccgagatgaacctggtgctgtcgcggtgctcggccggcaccgac
ggcgccgtggccgagaagctcaaccgggcccgggcacagctcctcaagaagtga
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