Aphelocoma coerulescens (scrub jay): 138110149
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Entry
138110149 CDS
T10543
Symbol
CHRNA9
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-9
KO
K04810
nicotinic acetylcholine receptor alpha-9
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
138110149 (CHRNA9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acoe04040
]
138110149 (CHRNA9)
Ion channels [BR:
acoe04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
138110149 (CHRNA9)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
138110149
NCBI-ProteinID:
XP_068870972
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Position
4:complement(55745382..55763528)
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AA seq
873 aa
AA seq
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MACAARAPAAPAAALFWEMLALLAREPGMEWLELSLAGQVVTSPPRRREAPRSGGGGAAG
AGSEIGYHQKHFLGPCPLKTLSLLEHSGDNRLWQDYLEGLKKFLVFRKSMGMPAAWPIPA
EQIRGFLAVESNYSSSKTLIYMAALSYLSKLTGNSDPLEDPITCCMVTGLKRRAGILRDK
YLPVTIEMLRSLLGALESVCITHYECLLFRALFTVAFFGALRIGEMVAKHHNVLQPELLY
LSDLQLMERKVLLFLPYSPVDQERHVISLALSGEPWVCPVLALRSYLTARSQLEGPLFVH
SSFRTVTKREFLAVLRCALRLLGLCPEQYGVHSFWLGTAVTAARCGFPGEDVTRLARWPC
MTPGRFYPYSFPRSQMSEQNTWKPGPEMKIRSLSSFYVSLWLLFTAVRLKAVESAKGQYA
HMLFNELFEDYSNALRPVEDTDKVLNVTLQITLSQIKDMDERNQILSAYLWIRQSWYDAY
LRWDKDKYDGLDSIRIPSNLVWRPDIVLYNKADDDFSEPVNTNVVLRYDGKITWDAPAIT
KSSCVVDVSYFPFDSQQCNLTFGSWTYNGNQVDIINSLDSGDLSDFIEDVEWEIHGMPAV
KNVITYGCCSEPYPDVTFTLILKRKSSFYIFNLLLPCILISFLAPLGFYLPADSGEKVSL
GVTVLLALTVFQLMVAEIMPPSENVPLIGKYYIATMTMITASTALTIIIMNLHHCGSEAK
PVPQWAKVVILDYMSKIFFVYDVGENCTSPKREKEEECRLEGDDGCQRRHKEVRSPLSNR
NDDCNLKEKLNGNWNKSYGVHGENVRETVNCCSCYKMLIKNIEYIANCVRDHKANRAKGI
EWKKVAKVMDRFFMWIFFIMVFFMSVLIIGKAA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcgctgcccgcgctccggccgcgcctgccgccgcgctcttctgggagatgctg
gcgctgctggcccgggagccgggtatggagtggctggagctgagccttgctgggcaggta
gtcacctccccgcctcgcagacgggaagcaccgcggagcggcgggggcggagcggcgggg
gccggaagcgagatcggttatcatcaaaagcatttcttgggaccttgtcctctgaagact
ttgtcgttgctggagcactcaggggataataggctttggcaggactacctcgaaggactg
aagaaattcctcgtctttaggaaaagcatgggaatgcctgcagcctggccaattccagcg
gagcaaattagaggatttttggctgtggaatctaattattcctcttcgaagacactcata
tacatggcagcactctcttatttatcaaaattgaccggtaactctgatcctctggaagat
cctataacctgttgcatggtgacagggttgaaacgtcgagcgggtatcctgagggataaa
tacttgcctgtaacaattgagatgttgcgatctctcttaggagctctggagtctgtgtgc
ataactcattatgaatgcttactgtttcgtgctttatttactgtagctttttttggagca
cttcgaataggagagatggtggcaaagcaccataatgtacttcagcctgagctgttgtat
ctgagtgatctccagctgatggagaggaaagtgttgctttttctgccttattctcctgtg
gatcaggagagacatgtcatcagcctggcgctgtctggagagccatgggtgtgccctgtt
ctggccctccggagctatttgacagctcgttcacagctggaagggccactctttgtgcac
tccagctttaggactgtaacgaagagggagttcctggccgttctccgatgtgccctgcgc
ctgctggggctgtgtccggagcagtacggcgtgcattccttctggctggggactgctgtc
actgctgcgcgctgcgggtttcccggggaagatgtcactcgcctggcaagatggccctgt
atgaccccaggaagattctacccatactcattcccacgaagtcaaatgtctgaacaaaat
acgtggaagccgggtccagaaatgaagataaggagcctctcttccttttacgtctctcta
tggttgctgttcacagcagtgagactcaaagctgtagaatcagccaaaggacaatatgct
cacatgctgtttaatgaactgtttgaagactactccaatgctctgagaccagtggaagac
acagataaagtactgaatgtcacccttcagatcacattgtcccaaattaaagacatggat
gaaaggaaccagattttgtcagcttacttatggattcgacaaagctggtatgatgcatac
ctcagatgggacaaagataaatatgatgggttggattctatcaggattccaagcaatttg
gtttggagaccagatattgtcctatataacaaggctgatgatgacttttcagaaccagta
aatactaatgtagtgctgagatatgatggaaaaatcacttgggatgcacctgctatcaca
aagagttcatgtgtagtggatgtgtcttattttccttttgacagccagcagtgcaacctt
acctttgggtcctggacctataatggtaatcaggtagacatcatcaattctcttgatagt
ggtgacctctctgacttcatagaagatgtggaatgggagattcatggtatgccagcagtt
aagaatgttatcacttacggctgctgctctgagccttatccagatgtgaccttcacgctg
attttgaaaaggaagtcctctttctacatatttaatctgttgcttccctgcattttgatc
tctttcctggccccactgggattttatctccctgcagactctggtgagaaagtgtctctg
ggtgttacagttcttcttgctctgactgtgttccagctgatggttgcagagatcatgccc
ccatctgaaaatgtacctttgataggaaagtactacatagcaaccatgaccatgatcaca
gcttccactgcattgacaatcattataatgaatctccatcattgcggctcagaagcaaag
cctgttccacaatgggccaaggtggttattttggactatatgtcaaaaatcttctttgtt
tatgatgtgggtgaaaattgcacaagtccaaaaagagagaaggaagaagaatgtaggtta
gagggggatgatgggtgtcagaggaggcacaaagaggtaaggagtcctctttccaatagg
aatgatgactgtaatctcaaggagaagctcaatggaaattggaataaaagctatggagtt
catggtgaaaatgttagggagactgttaattgctgttcttgttacaaaatgctgattaaa
aatatcgagtatattgctaattgtgttagagaccataaagcaaaccgggccaaaggaatt
gagtggaaaaaagttgcaaaagtgatggacaggtttttcatgtggattttcttcatcatg
gtgttctttatgagcgtgctgatcattgggaaggctgcttaa
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