Aphelocoma coerulescens (scrub jay): 138110251
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Entry
138110251 CDS
T10543
Name
(RefSeq) homeobox protein CDX-4-like
KO
K09312
homeobox protein CDX1/4
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138110251
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
138110251
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Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
YdaS_toxin
MS_C
DUF7645
Motif
Other DBs
NCBI-GeneID:
138110251
NCBI-ProteinID:
XP_068871058
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Position
4A:complement(20160794..20169382)
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AA seq
260 aa
AA seq
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MYVSSLLDKEPSMYPGSARANNNLPVQNFVSAPAYSDYMGYHPVPALDTHGQPAAAWGSH
YGPQREDWSAYGPGPSSAVAAAHINGSSPGQGSYSSADYSSLHPAAAAGLPPVDTINAQQ
ISPNSQRHSSYEWMRKTVQTNTAGKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKS
ELAANLGLSERQVKIWFQNRRAKERKMIKKKISQFDGSGGSAQSDSGSLSPNELSNSLFP
PPHGINGLQPNDIHQVIVSE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagctcgctcttggataaggagcccagcatgtacccaggatctgccagggcc
aacaacaacctgcccgtgcagaacttcgtgtccgctccagcctactccgactacatggga
taccaccctgtgccagccctggacacccacgggcagccggcggcagcctggggctcccac
tacggcccccagcgggaggactggagcgcctacggcccaggcccttccagcgccgtggct
gctgcccacatcaatggctcgtcccctggccagggctcctacagctctgctgattacagc
tccctgcatcccgccgccgctgcggggttacctcctgtagatacaattaatgcccagcaa
atctctcccaacagccaaaggcacagctcttatgagtggatgaggaaaacggtgcaaacc
aacactgctggtaaaacaagaacaaaagaaaagtaccgagttgtttacacagatcaccag
agactggaattagagaaggaatttcactgcaacagatacattacaatcaggaggaagtca
gaactcgcagcaaacctgggactctccgaaagacaggtgaaaatctggttccagaatcgc
cgagcaaaagaaagaaaaatgatcaagaagaaaatctcgcagtttgatggcagcgggggc
tcagctcagagcgactctggttcactcagtccaaatgaactgtcaaattctctgttccca
ccaccacatggaataaatggattacagcctaatgacattcatcaagtcatagtttcagaa
tga
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